Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_J12
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79339-1|CAA55897.1|  606|Drosophila melanogaster musashi protein.     30   2.5  
AY119171-1|AAM51031.1|  634|Drosophila melanogaster RH49436p pro...    30   2.5  
AY051802-1|AAK93226.1|  606|Drosophila melanogaster LD31631p pro...    30   2.5  
AE014297-3816|AAF56478.2|  606|Drosophila melanogaster CG5099-PA...    30   2.5  
AE014297-3812|AAN14056.2|  634|Drosophila melanogaster CG5099-PB...    30   2.5  
AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-P...    30   2.5  
AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-P...    30   2.5  
BT003274-1|AAO25031.1|  313|Drosophila melanogaster LD15419p pro...    29   5.8  

>X79339-1|CAA55897.1|  606|Drosophila melanogaster musashi protein.
          Length = 606

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 351 VRLLEQNCKPLFEGYARNTFEPDHVATWISEFGSSNFKDPRVECGRAKPR 202
           V L++Q  K    G+   TFE + V   + E      K+ +VEC +A+P+
Sbjct: 293 VMLMDQQTKR-HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 341


>AY119171-1|AAM51031.1|  634|Drosophila melanogaster RH49436p
           protein.
          Length = 634

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 351 VRLLEQNCKPLFEGYARNTFEPDHVATWISEFGSSNFKDPRVECGRAKPR 202
           V L++Q  K    G+   TFE + V   + E      K+ +VEC +A+P+
Sbjct: 321 VMLMDQQTKR-HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 369


>AY051802-1|AAK93226.1|  606|Drosophila melanogaster LD31631p
           protein.
          Length = 606

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 351 VRLLEQNCKPLFEGYARNTFEPDHVATWISEFGSSNFKDPRVECGRAKPR 202
           V L++Q  K    G+   TFE + V   + E      K+ +VEC +A+P+
Sbjct: 293 VMLMDQQTKR-HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 341


>AE014297-3816|AAF56478.2|  606|Drosophila melanogaster CG5099-PA,
           isoform A protein.
          Length = 606

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 351 VRLLEQNCKPLFEGYARNTFEPDHVATWISEFGSSNFKDPRVECGRAKPR 202
           V L++Q  K    G+   TFE + V   + E      K+ +VEC +A+P+
Sbjct: 293 VMLMDQQTKR-HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 341


>AE014297-3812|AAN14056.2|  634|Drosophila melanogaster CG5099-PB,
           isoform B protein.
          Length = 634

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 351 VRLLEQNCKPLFEGYARNTFEPDHVATWISEFGSSNFKDPRVECGRAKPR 202
           V L++Q  K    G+   TFE + V   + E      K+ +VEC +A+P+
Sbjct: 321 VMLMDQQTKR-HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 369


>AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-PD,
           isoform D protein.
          Length = 183

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 632 SKFSSIIIFVGIFLC-LCPAQVKAESEFTIVTDDSEKTCTSKISDCSTTPP 483
           +KF  + +FVG+F   LC   V   +     T +S+ T T   +  + TPP
Sbjct: 5   AKFLILCLFVGLFSANLCEEAVTTPAPADTTTQESKNTTTPPDTTTTVTPP 55


>AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-PC,
           isoform C protein.
          Length = 183

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 632 SKFSSIIIFVGIFLC-LCPAQVKAESEFTIVTDDSEKTCTSKISDCSTTPP 483
           +KF  + +FVG+F   LC   V   +     T +S+ T T   +  + TPP
Sbjct: 5   AKFLILCLFVGLFSANLCEEAVTTPAPADTTTQESKNTTTPPDTTTTVTPP 55


>BT003274-1|AAO25031.1|  313|Drosophila melanogaster LD15419p
           protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 345 LLEQNCKPLFEGYARNTFEPDHVATWISEFGSSNFKDPRVECGRAKPR 202
           L++Q  K    G+   TFE + V   + E      K+ +VEC +A+P+
Sbjct: 2   LMDQQTKR-HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,612,398
Number of Sequences: 53049
Number of extensions: 680113
Number of successful extensions: 1915
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)