Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_J11
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 87 7e-18
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 87 7e-18
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 75 6e-14
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 74 7e-14
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 72 3e-13
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 72 3e-13
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 68 5e-12
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 62 3e-10
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 62 3e-10
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 58 7e-09
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 58 7e-09
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 55 5e-08
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 50 1e-06
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 46 2e-05
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 41 8e-04
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 39 0.003
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 39 0.003
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.072
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory ... 29 2.1
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 29 2.1
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 29 2.1
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 29 2.1
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 29 2.1
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 29 2.7
U88175-1|AAB42281.2| 391|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 28 6.3
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 88.2 bits (209), Expect = 4e-18
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Frame = -1
Query: 462 KTCNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNI 283
K + E P L +L + P EG YRGGKF F V P Y + PP VKC T V+HPNI
Sbjct: 46 KLWHLEVPSTSCLHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNI 105
Query: 282 DLEGNVCLNILRED------WKPVLTVNSIVYGLQYLF 187
+ +G++CL+ILR++ W+P + +V+GL LF
Sbjct: 106 NEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLF 143
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 87.4 bits (207), Expect = 7e-18
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = -1
Query: 498 RITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHE 328
RI K+L +L P C+ P DDL +++ I P E Y+GG F + +YP +
Sbjct: 5 RIQKELQDLGRDPPAQCSAG-PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 327 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPXP 172
PPKV T +YHPNI+ G++CL+ILR W P LT++ ++ + L +P P
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNP 115
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 87.4 bits (207), Expect = 7e-18
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = -1
Query: 498 RITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHE 328
RI K+L +L P C+ P DDL +++ I P E Y+GG F + +YP +
Sbjct: 5 RIQKELQDLGRDPPAQCSAG-PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 327 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPXP 172
PPKV T +YHPNI+ G++CL+ILR W P LT++ ++ + L +P P
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNP 115
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = -1
Query: 441 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 265
PD + F ++I PD+ + GG F + YP PKV+ T +YHPNID G +
Sbjct: 28 PDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRI 87
Query: 264 CLNILREDWKPVLTVNSIVYGLQYLFLEPXP 172
CL+IL++ W P L + +++ +Q L P P
Sbjct: 88 CLDILKDKWSPALQIRTVLLSIQALLSAPNP 118
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 74.1 bits (174), Expect = 7e-14
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = -1
Query: 510 AAQLRITKDLNELNL--PKTCNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNY 337
+A R+ K+L +L K + +LL + +++ PD+ Y G F +Y
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLIPDKEPYNKGAFKVGITFPVDY 61
Query: 336 PHEPPKVKCETAVYHPNIDLEGNVCLNIL-REDWKPVLTVNSIVYGLQYLFLEPXP 172
P +PPKV ET +YHPN+D EG CL I+ E+WKP ++ L L EP P
Sbjct: 62 PFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEP 117
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = -1
Query: 498 RITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEP 325
R+ +D +L P + P D++L ++ II P E + G F S + YP++P
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 324 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPXP 172
P VK + ++HPN+ +G++CL+IL+ W P V +I+ +Q L EP P
Sbjct: 68 PTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNP 118
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = -1
Query: 498 RITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEP 325
R+ +D +L P + P D++L ++ II P E + G F S + YP++P
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 324 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPXP 172
P VK + ++HPN+ +G++CL+IL+ W P V +I+ +Q L EP P
Sbjct: 68 PTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNP 118
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = -1
Query: 399 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLT 223
P + Y GG F K+ YP PP VK T ++HPN+ + G +CL+IL++ W LT
Sbjct: 46 PPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLT 105
Query: 222 VNSIVYGLQYLFLEPXP*RSPQ 157
+ +++ +Q L P P + PQ
Sbjct: 106 LRTVLLSIQALMCTPEP-KDPQ 126
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Frame = -1
Query: 438 DPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 262
D +D+ ++ L+I P + Y GG F +YP +PPK+K + ++HPNID EGNVC
Sbjct: 29 DDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVC 88
Query: 261 LNIL-------------REDWKPVLTVNSIVYGLQYLFLEP 178
++IL E W PV TV +I+ + + +P
Sbjct: 89 ISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDP 129
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 62.1 bits (144), Expect = 3e-10
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Frame = -1
Query: 516 ASAAQLRITKDLNELN--LPKTCNTEFPDP-DDLLNFKLIICPDEG-FYRGGKFVFSFKV 349
+ AA R+ K+L +L P+ + +DL +K+ + EG Y G F+ F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
Query: 348 GPNYPHEPPKVKC--ETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 211
GP YP P+V ET HP+I G++CL+IL +DW P L+V S+
Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSV 109
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = -1
Query: 384 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 211
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 210 VYGLQYLFLEP 178
+ G+Q L P
Sbjct: 113 LIGIQDLLNHP 123
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = -1
Query: 384 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 211
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 210 VYGLQYLFLEP 178
+ G+Q L P
Sbjct: 113 LIGIQDLLNHP 123
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Frame = -1
Query: 432 DDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKV---------------KCETA 301
++L++ K I EG Y GG F + +YP EPPKV K T
Sbjct: 48 NNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTR 107
Query: 300 VYHPNIDLE-GNVCLNILREDWKPVLTVNSIVYGLQYLFLEPXP 172
++HPNI + G +CL+IL++ W LT+ +++ LQ + P P
Sbjct: 108 IWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEP 151
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 54.8 bits (126), Expect = 5e-08
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Frame = -1
Query: 516 ASAAQLRITKDLNEL-NLPKTCNTEFPDPDDLLNFKL-IICPDEGFYRGGKFVFSFKVGP 343
+S A +T +L L + P T + D+L + + I P + Y+GG F S +
Sbjct: 8 SSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPS 67
Query: 342 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILR-------------EDWKPVLTVNSIVYG 202
NYP+ PP +K T V+HPN+ G++C++IL E W P +V +I+
Sbjct: 68 NYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLS 127
Query: 201 LQYLFLEP 178
+ L EP
Sbjct: 128 VISLLNEP 135
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = -1
Query: 429 DLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCL-N 256
D+ FK+I D Y+ F + V YP +PP +K VYHPN+D + +C
Sbjct: 44 DIFQFKII--GDGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPM 101
Query: 255 ILREDWKPVLTVNSIVYGLQYLFLEP 178
+L+E+WKP T+ ++ L L EP
Sbjct: 102 LLQENWKPETTMEDVLLNLIVLLNEP 127
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Frame = -1
Query: 438 DPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 262
D D+ ++ +I P+E + G F +YP PPK++ ++HPNI +G VC
Sbjct: 30 DEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVC 89
Query: 261 LNIL-------------REDWKPVLTVNSIVYGLQYLFLEP 178
++IL E W PV ++ I+ + + EP
Sbjct: 90 ISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEP 130
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 396 DEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILRED-WKPVLT 223
+E Y GG F K+G +YP + P VK T ++HP++ +G +CL+ + W +T
Sbjct: 389 EETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMT 448
Query: 222 VNSIVYGLQ 196
+ ++ +Q
Sbjct: 449 IYKVLIVIQ 457
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 399 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVLT 223
P + Y G + + YP + P + ++HPNID G VCL+++ + W +
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYD 101
Query: 222 VNSI 211
+ +I
Sbjct: 102 LTNI 105
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Frame = -1
Query: 411 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCET-----AVYHPNIDLEGNVCLNIL- 250
LI PD+ Y G F F YP PPK T ++PN+ +G +CL+IL
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILG 507
Query: 249 ------REDWKPVLTVNSIVYGLQ 196
E W P ++ ++ +Q
Sbjct: 508 TWEGRPEEKWNPYCSLMQVLVSIQ 531
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -1
Query: 384 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL-REDWKPVLTVNSIV 208
+ GG++ S +P PP + +T ++HPN+DL G++ L +L +E W ++ ++
Sbjct: 83 WEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSETSLKKLL 141
Query: 207 YGLQYLFLEP 178
+ L P
Sbjct: 142 REISNLLATP 151
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.072
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = -1
Query: 456 CNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEP-PKVKCETAVYHPNID 280
C + LL +I P Y GG F + P H P+V T ++HPN+
Sbjct: 52 CIMRIDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLG 111
Query: 279 LEGNVCLNILREDWKPVLTV--NSIVYGLQ 196
GN + ++ + + L V N IV G++
Sbjct: 112 KYGNWDMRGIQWERRSNLEVLYNFIVEGMR 141
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical protein
F48C1.1 protein.
Length = 1064
Score = 30.7 bits (66), Expect = 0.89
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 605 LVRKMIKLFSLKQQKKDEEGSTRGGGSQKKHQQPNYELQ 489
L+ +IKL + + QK D G TR GG K P+YEL+
Sbjct: 1015 LMDLLIKLGAKQVQKTDLSGVTRVGGIIKVEYLPDYELK 1053
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 408 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 265
II P Y + + G NYP EPP V+ T V+ ++ V
Sbjct: 45 IIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
>U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform c protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 528 ITKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 418
I + SA QLR + LN ++ K FP P DLL+
Sbjct: 253 IAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 289
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 528 ITKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 418
I + SA QLR + LN ++ K FP P DLL+
Sbjct: 328 IAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 528 ITKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 418
I + SA QLR + LN ++ K FP P DLL+
Sbjct: 328 IAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 528 ITKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 418
I + SA QLR + LN ++ K FP P DLL+
Sbjct: 328 IAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 528 ITKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 418
I + SA QLR + LN ++ K FP P DLL+
Sbjct: 328 IAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 277 RRQRVP-EYTQGRLETCSHS*LHSVRSPVFILGTKXLKIP 161
+R+ VP E TQ + +H +R P F+ GT+ K P
Sbjct: 51 KRENVPSEITQNLCNSIEAIFIHGLRDPFFLKGTRYAKYP 90
>U88175-1|AAB42281.2| 391|Caenorhabditis elegans Hypothetical
protein F21F3.4 protein.
Length = 391
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 602 VRKMIKLFSLKQQKKDEEGSTRGGGSQKKHQQPNYELQKI 483
V M + S K +K+++ GG ++HQ+P YE++KI
Sbjct: 318 VMSMSAINSSKLKKEEKVTRKSSGGGHEEHQKP-YEIRKI 356
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 593 MIKLFSLKQQKKDEEGSTRGGG 528
M K KQQK+D+ G++ GGG
Sbjct: 151 MAKFEQFKQQKEDQNGNSGGGG 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,347,395
Number of Sequences: 27780
Number of extensions: 280130
Number of successful extensions: 811
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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