Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_J11
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   9.8  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 559 KMKRVLPEEEDHKKSISSPITNYKRF 482
           KM+ +L EE+  + +I   +TNY  F
Sbjct: 53  KMQELLQEEDISEGNIKKYLTNYSCF 78


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 538 EEEDHKKSISSPITNYKRFE*IESTENMQHR 446
           +++ H+ S S   +N +RF    S ++ QH+
Sbjct: 103 QQQHHQDSSSEHASNQERFGYFSSLKDHQHQ 133


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 593 MIKLFSLKQQKKDEEGSTRGGGS 525
           M +  ++ Q+KK+   + +GGGS
Sbjct: 1   MSRSINMDQEKKNNVENLKGGGS 23


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 492 TKDLNELNLPKTCNTEFPD 436
           T +LN  N P TC T+  D
Sbjct: 13  TWELNATNSPHTCRTKNGD 31


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 220 NCENRFPIF 246
           N ENRFP+F
Sbjct: 315 NMENRFPLF 323


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,046
Number of Sequences: 438
Number of extensions: 3376
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)