Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_J05
         (334 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   1.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   3.0  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    20   6.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   6.8  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    20   9.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    20   9.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    20   9.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   9.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   9.1  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 129 EDYWNWPHASFEDCXG 82
           + Y +W  A +EDC G
Sbjct: 110 QPYPDWSFAKYEDCSG 125


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 123 YWNWPHASFEDCXG 82
           Y +W  A +EDC G
Sbjct: 113 YPDWSFAKYEDCSG 126


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 129 EDYWNWPHASFEDCXGGASV 70
           E Y NW  A  ++C G  SV
Sbjct: 106 EPYPNWSWAKNQNCSGITSV 125


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 164 VILLQDIHIGRILIFECDMTIYHIFCITYGSYFGAY 271
           +IL  ++H+    + E  +    IF  T   Y+G +
Sbjct: 179 IILADELHLTEYKLVEKWVNSSEIFYTTSQQYYGHF 214


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 219 ISHSKIKMRPMWI 181
           + H+KI +RP W+
Sbjct: 222 LRHTKIWLRPDWL 234


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -2

Query: 168 ITILPLVSEG*AQEDYWNWPHASFEDCXGGAS 73
           + +LP +         +++P  SFED   G++
Sbjct: 38  VLVLPSIERDQMMAATFDFPSLSFEDSDEGSN 69


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -2

Query: 168 ITILPLVSEG*AQEDYWNWPHASFEDCXGGAS 73
           + +LP +         +++P  SFED   G++
Sbjct: 38  VLVLPSIERDQMMAATFDFPSLSFEDSDEGSN 69


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -2

Query: 168 ITILPLVSEG*AQEDYWNWPHASFEDCXGGAS 73
           + +LP +         +++P  SFED   G++
Sbjct: 38  VLVLPSIERDQMMAATFDFPSLSFEDSDEGSN 69


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 283 PQASVSAEIRPIRYAEDVVDRHITFKN 203
           P      E+RPI+  +D  + +  +KN
Sbjct: 131 PPGRFFCEVRPIKRVKDSTNCNCGWKN 157


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 233 IFCITYGSYFGAY 271
           +FCIT+G   G +
Sbjct: 245 VFCITFGLVAGQF 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,724
Number of Sequences: 438
Number of extensions: 1854
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)