BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_J04 (548 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 30 1.1 06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 30 1.4 02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 29 1.8 08_02_0685 + 20039318-20040433,20040574-20040982,20042906-200429... 29 2.4 11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 29 3.2 09_01_0029 - 490433-490591,490930-491019,491860-492608,492996-49... 29 3.2 >06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234, 7631502-7631591,7631680-7631845,7632225-7633191, 7633402-7633591,7633908-7634048,7634416-7634736 Length = 791 Score = 30.3 bits (65), Expect = 1.1 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +1 Query: 142 KNSKHCKITISILFKADKKMQSMSPRFTIAMILGYIDEIRLDYVNM 279 KN CK ISIL KA K ++ + + M++ Y+D + +N+ Sbjct: 76 KNLNWCKFVISILQKATKAGKTTNSACLLYMMILYLDSLSFKNLNV 121 >06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647, 7748142-7748595,7748994-7749134,7749444-7749633, 7749842-7750530,7750605-7750804,7751210-7751375, 7751850-7752046,7752162-7752396 Length = 876 Score = 29.9 bits (64), Expect = 1.4 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +1 Query: 142 KNSKHCKITISILFKADKKMQSMSPRFTIAMILGYIDEIRLDYVNM 279 KN CK ISIL KA K ++ + + M++ Y+D + +N+ Sbjct: 240 KNLNWCKFVISILQKAAKAGKNTNSSCLLYMMILYLDSLSFKNLNV 285 >02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177, 9215601-9215911,9215944-9216566,9216779-9216968, 9217096-9217197,9217285-9217425,9217815-9218411, 9219126-9219286,9220709-9220824,9221538-9221654, 9221746-9221808,9221879-9221949 Length = 988 Score = 29.5 bits (63), Expect = 1.8 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +1 Query: 142 KNSKHCKITISILFKADKKMQSMSPRFTIAMILGYIDEIRLDYVNM 279 KN CK ISIL KA K ++ + + M++ Y+D + +N+ Sbjct: 344 KNLNWCKFIISILQKAAKAGKNTNSACLLYMMILYLDSLSFKNLNV 389 >08_02_0685 + 20039318-20040433,20040574-20040982,20042906-20042973, 20043336-20043518,20043641-20043964,20045653-20045694 Length = 713 Score = 29.1 bits (62), Expect = 2.4 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = +3 Query: 417 GFLN-GYLVLKVGHFFKLLP*ETVLFISRY 503 GF N GYL L VGHFF ++P VL + R+ Sbjct: 465 GFKNVGYLWLAVGHFFLIIP-YAVLRLRRF 493 >11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920, 16794787-16796964,16797065-16797322,16799815-16800172 Length = 1530 Score = 28.7 bits (61), Expect = 3.2 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Frame = +2 Query: 44 NLLNLFSATVATG*IFKKALKV---IGINSEIKKDEKTVSTAKSQ*VSYL---KLIRKCN 205 N NLF + G + ++ LK+ + INS + K+EK + A Q + L K R+CN Sbjct: 989 NAHNLFGEMSSQGEVSQEDLKISKAVPINSPMNKEEKMMDEALDQILEKLEQMKTKRRCN 1048 Query: 206 Q 208 + Sbjct: 1049 E 1049 >09_01_0029 - 490433-490591,490930-491019,491860-492608,492996-493047, 493175-493276,493363-493494,493882-494109,494172-494321 Length = 553 Score = 28.7 bits (61), Expect = 3.2 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +1 Query: 142 KNSKHCKITISILFKADKKMQSMSPRFTIAMILGYIDEIRLDYVNM 279 KN CK IS L KA K ++ + + M++ Y+D + +N+ Sbjct: 95 KNLNSCKFVISTLQKATKAGKNTNSACLLYMMILYLDSLSFKNLNV 140 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,869,374 Number of Sequences: 37544 Number of extensions: 197764 Number of successful extensions: 298 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 294 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 298 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1233951264 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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