Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_J02
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 65 5e-11
03_02_0540 + 9340379-9340592,9341250-9342988 64 1e-10
05_05_0109 - 22454539-22456268,22457069-22457279 63 2e-10
03_06_0484 + 34233042-34233258,34235317-34237049 62 6e-10
03_02_0546 - 9381989-9383733,9385838-9386054 62 6e-10
11_08_0075 + 28173220-28173433,28175348-28177083 60 2e-09
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 60 2e-09
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 53 2e-07
08_01_0654 - 5639419-5641449 51 1e-06
05_04_0392 - 20889699-20891726 50 1e-06
05_04_0052 - 17515344-17517353 47 2e-05
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 34 0.13
06_01_0426 + 3050332-3050526,3050864-3051116,3051923-3051980,305... 31 1.2
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 30 1.6
03_05_0057 + 20350971-20351405 28 6.4
03_01_0309 - 2432395-2433271,2433494-2434495,2434538-2435073,243... 28 6.4
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 28 8.5
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
K+ K++ DDK K+E+A+D AI WL+ NQ AE++E++ + K LE + PIIAK+Y
Sbjct: 755 KIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMY 809
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
K+ K+ + DK K+E+A+D AI WL+ NQ AE+EE++ + K LE V PIIAK+Y
Sbjct: 563 KIASKLPEADKKKIEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMY 617
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
K+ K+ DDK ++E+A+D AI WL+ NQ AE++E++ + K LE + PIIAK+Y
Sbjct: 562 KIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMY 616
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
K+ K+ DDK K+E+A++ AI+WL++NQ AE EE++ + K LE + PIIAK+Y
Sbjct: 564 KIASKLPADDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMY 618
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/55 (47%), Positives = 41/55 (74%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
K+ K+ DDK K+E+A++ AIKWL+ NQ AE++E++ + K LE + PII+K+Y
Sbjct: 564 KIASKLPADDKKKIEDAIEDAIKWLDGNQLAEADEFEDKMKELESLCNPIISKMY 618
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
K+ K+ DK K+E+A+D AI+WL+ NQ AE++E+ + K LE + PIIAK+Y
Sbjct: 563 KIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMY 617
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
KL K+ ++K K+EEAL A++WL++NQ AE EEY+ + K +E V PII+ +Y
Sbjct: 587 KLADKLESEEKEKVEEALKEALEWLDENQTAEKEEYEEKLKEVEAVCNPIISAVY 641
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Frame = -1
Query: 715 LGXKVTDDDKAKMEEALDAAIKWLEDN----QDAESEEYKXQKKTLEDVVQPIIAKLY 554
+ K+ DDD+ +ME AL A++WLEDN + AE E+Y+ + K +E V PII ++Y
Sbjct: 593 MAGKIGDDDRERMESALTEALEWLEDNDGGARTAEKEDYEEKLKEVEQVCGPIIKQVY 650
>08_01_0654 - 5639419-5641449
Length = 676
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Frame = -1
Query: 715 LGXKVTD----DDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
LG K+ D ++K K+EEA+ A +WL+ N DA EEY+ + + LEDV P+++ +Y
Sbjct: 594 LGGKMADAMEGEEKDKVEEAVREAYEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVY 651
>05_04_0392 - 20889699-20891726
Length = 675
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Frame = -1
Query: 715 LGXKVTD----DDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
LG K+ D ++K K+EEA+ A +WL+ N DA EEY+ + + LEDV P+++ +Y
Sbjct: 594 LGGKMADAMEGEEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVY 651
>05_04_0052 - 17515344-17517353
Length = 669
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = -1
Query: 691 DKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
+K K+E A+ A +WL+ NQD EEY+ + + LEDV P+++ +Y
Sbjct: 603 EKEKVEAAVMEAYEWLDGNQDVGKEEYEEKLRELEDVCNPVMSAVY 648
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 661 AAIKWLEDNQDAESEEYKXQKKTLEDVVQPI 569
AA +WL+ N AE E+Y+ + K LED P+
Sbjct: 605 AASEWLDGNPAAEKEDYEEKLKELEDACGPV 635
>06_01_0426 +
3050332-3050526,3050864-3051116,3051923-3051980,
3052054-3052105,3052601-3052678,3053012-3053188,
3053594-3053806
Length = 341
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 691 DKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKL 557
DK ++ L A K L+ N+D SEE + ++K ED+V I A +
Sbjct: 177 DKTRLNTLLKHATKELQKNEDKLSEE-RSRRKEYEDMVMAIQASI 220
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 700 TDDDKAKMEEALDAAIKWLE-DNQDAESEEYKXQKKTLEDVVQPIIAKL 557
T+ ++ E L+ WL D +DA++ E+K + L+ + PI+ +L
Sbjct: 695 TEQERESFAEKLNEVQDWLYMDGEDAQANEFKERLDQLKAIGDPILFRL 743
>03_05_0057 + 20350971-20351405
Length = 144
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 578 AAHHRQTLP-RPGWSTAPGGAG 516
A HHRQ P RP + PGGAG
Sbjct: 40 APHHRQPAPDRPSAAPEPGGAG 61
>03_01_0309 -
2432395-2433271,2433494-2434495,2434538-2435073,
2435579-2435716,2436050-2436148,2436278-2436346,
2436968-2437063
Length = 938
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1
Query: 229 AIVNCVF-VNMEIDNISRFSLPVSNRLFSHTMRRHQCAGWMXLFXRLQICE 80
A + C+F V+ ++DNI+R LP +F H + + W+ +++C+
Sbjct: 379 ATLGCIFSVDSDVDNINRALLPAEFTVFLHFL---NASPWLREEVVIELCK 426
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 466 VWLRFSLITTRP*SRHLPAPPGAVLH 543
V+LR S++ P H P PPGA +H
Sbjct: 25 VFLRRSVLPPPPAPHHAPPPPGAHVH 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,241,023
Number of Sequences: 37544
Number of extensions: 313965
Number of successful extensions: 920
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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