Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_J02
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 76 2e-14
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 76 2e-14
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 69 4e-12
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 69 4e-12
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 64 1e-10
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 60 1e-09
Z81592-9|CAB63315.1| 945|Caenorhabditis elegans Hypothetical pr... 30 1.9
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 28 7.7
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
KLG K+TD+DK +E A++ AI+WL NQDA +EE K QKK LE VVQPI++KLY
Sbjct: 214 KLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
KLG K+TD+DK +E A++ AI+WL NQDA +EE K QKK LE VVQPI++KLY
Sbjct: 583 KLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
KLG K+ +DDK +EEA++ AI WL N +A +EE K QKK LE VQPI++KLY
Sbjct: 586 KLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
KLG K+ +DDK +EEA++ AI WL N +A +EE K QKK LE VQPI++KLY
Sbjct: 586 KLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
KL K++ +DK K+E+ D +KWL+ NQ AE EE++ Q+K LE + PII+KLY
Sbjct: 558 KLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 612
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = -1
Query: 718 KLGXKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKXQKKTLEDVVQPIIAKLY 554
KL K++ +DK K+E+ D +KWL+ NQ AE EE++ Q+K LE + +P ++KLY
Sbjct: 558 KLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLY 612
>Z81592-9|CAB63315.1| 945|Caenorhabditis elegans Hypothetical
protein T16G1.9 protein.
Length = 945
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 220 NCVFVNMEIDNISRFSLPVSNRLFSHTMR 134
N +FVN E+ R+ LP +NR H M+
Sbjct: 492 NYLFVNFEVRTTDRYQLPYTNRELFHMMQ 520
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/47 (25%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = -1
Query: 703 VTDDDKAKMEEALDAAIKWLEDN--QDAESEEYKXQKKTLEDVVQPI 569
+ D++K K+E+++ WLED+ +D ++++ L++VV+ +
Sbjct: 720 MADEEKTKLEDSVKRIRAWLEDDVTKDTPTKDFTDNLLELKNVVRSV 766
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical
protein F13D2.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 141 VCENNRFDTGRLNRLMLSISMLTNTQLTIAFTKNTKCTFFYRNRRTSHSHMRAQRQ 308
V N R G N ML I L+NT L + + FY++ + H++ R+
Sbjct: 81 VIANRRIKNGFSNDTMLYIPNLSNTSLVSSLISPEEIKPFYKDDEIMNVHVKNTRK 136
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical
protein F13D2.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 141 VCENNRFDTGRLNRLMLSISMLTNTQLTIAFTKNTKCTFFYRNRRTSHSHMRAQRQ 308
V N R G N ML I L+NT L + + FY++ + H++ R+
Sbjct: 81 VIANRRIKNGFSNDTMLYIPNLSNTSLVSSLISPEEIKPFYKDDEIMNVHVKNTRK 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,954,511
Number of Sequences: 27780
Number of extensions: 277173
Number of successful extensions: 837
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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