Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I16
         (362 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0783 + 25183361-25185628                                         28   2.0  
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702...    27   3.4  

>01_05_0783 + 25183361-25185628
          Length = 755

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -1

Query: 275 RPIYNMKCLKSVMXKTKVWTFDVL-LNIKSSRLYCETLLKYLLQPTWWNIVF 123
           +P  + + +KS       W + +L L++  S L C T+L+  +Q  WW ++F
Sbjct: 415 KPDVHTRLMKSYRDVPSWWFYAMLALSMAVSLLLC-TVLRSAVQLPWWGLLF 465


>02_05_0235 - 27068516-27069032,27069697-27069788,27070056-27070289,
            27071569-27071676,27071796-27071855,27072368-27072443,
            27072550-27072710,27076919-27076981,27077061-27077148,
            27077568-27078308,27078406-27079033,27079314-27079368,
            27082073-27083527
          Length = 1425

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = -1

Query: 350  QPELRKYLRLIXLELTYLYCTNCHRRPIYNMKCLKSVMXKTKVWTFDVLLNIKSSR 183
            +P +R Y + I L L YL+  N   R I     L     + K+  F +  +I   +
Sbjct: 1039 EPAIRSYTKQILLGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHINGQQ 1094


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,723,898
Number of Sequences: 37544
Number of extensions: 121243
Number of successful extensions: 153
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)