Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I16
         (362 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant pro...    29   4.5  
BC051883-1|AAH51883.2| 1166|Homo sapiens castor zinc finger 1 pr...    29   4.5  
AL139423-3|CAI22571.1| 1166|Homo sapiens castor zinc finger 1 pr...    29   4.5  
AK000328-1|BAA91089.1| 1044|Homo sapiens protein ( Homo sapiens ...    29   4.5  

>DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant
           protein.
          Length = 1759

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +1

Query: 109 HINFKNTMFH--QVGCNKYFNNVS 174
           H+N K+T +H  QVGCNK + + S
Sbjct: 543 HLNGKSTHYHCMQVGCNKVYTSTS 566


>BC051883-1|AAH51883.2| 1166|Homo sapiens castor zinc finger 1
           protein.
          Length = 1166

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +1

Query: 109 HINFKNTMFH--QVGCNKYFNNVS 174
           H+N K+T +H  QVGCNK + + S
Sbjct: 543 HLNGKSTHYHCMQVGCNKVYTSTS 566


>AL139423-3|CAI22571.1| 1166|Homo sapiens castor zinc finger 1
           protein.
          Length = 1166

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +1

Query: 109 HINFKNTMFH--QVGCNKYFNNVS 174
           H+N K+T +H  QVGCNK + + S
Sbjct: 543 HLNGKSTHYHCMQVGCNKVYTSTS 566


>AK000328-1|BAA91089.1| 1044|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20321 fis, clone HEP09380. ).
          Length = 1044

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +1

Query: 109 HINFKNTMFH--QVGCNKYFNNVS 174
           H+N K+T +H  QVGCNK + + S
Sbjct: 421 HLNGKSTHYHCMQVGCNKVYTSTS 444


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,867,526
Number of Sequences: 237096
Number of extensions: 720511
Number of successful extensions: 4644
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4644
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)