Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_I13
(413 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS... 146 2e-37
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 25 0.82
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 24 1.9
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 3.3
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 5.8
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 23 5.8
AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 22 7.7
AJ549085-1|CAD70159.1| 529|Anopheles gambiae thioredoxin-disulf... 22 7.7
AJ549084-1|CAD70158.1| 505|Anopheles gambiae thioredoxin-disulf... 22 7.7
AJ459821-1|CAD30858.1| 502|Anopheles gambiae thioredoxin reduct... 22 7.7
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 22 7.7
>Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS11
protein.
Length = 151
Score = 146 bits (355), Expect = 2e-37
Identities = 69/113 (61%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 MADQTE-KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 206
MADQ +AFQKQ + LNRK ++K +R H ++GLGFKTP+EAI GTYIDKKCPFTG+
Sbjct: 1 MADQQNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGH 60
Query: 205 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLAPCLQ 47
+SIRGRILTGVV+K + + IRRDYL ++ KY+ FEKR+RNM +HL+PC +
Sbjct: 61 ISIRGRILTGVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFR 111
Score = 28.7 bits (61), Expect = 0.088
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 51 YRDVEIGEIVTIGXCK 4
+RDVE G+IVT+G C+
Sbjct: 110 FRDVEAGDIVTLGECR 125
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 25.4 bits (53), Expect = 0.82
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 274 LNQHSYGDACPSSSCHLSCSGKRWPVSETLSLSDPPFCLTMKKQF 408
L+QH + SSS S S S + S D P L MKK +
Sbjct: 103 LHQHQQSSSSSSSSSSSSMSSSS---SSSFSSPDSPLSLVMKKPY 144
Score = 22.2 bits (45), Expect = 7.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 302 HASP*ECWFRLQNSQRGD*GYLH 234
H P EC + +S GYLH
Sbjct: 82 HYEPMECHSAVNSSSNSSTGYLH 104
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 24.2 bits (50), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 179 GEDAAADRNVTSEGTLLVNVGT 244
GED D+ S+GTLL +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 3.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 91 KRHRNMSVHLAPCLQGRG 38
+RH M+ HLA L G G
Sbjct: 974 RRHGEMTFHLAQVLSGHG 991
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 22.6 bits (46), Expect = 5.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 91 KRHRNMSVHLAPCLQGRG 38
++H +M+ HLA L G G
Sbjct: 970 RKHGDMTFHLAQVLSGHG 987
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 22.6 bits (46), Expect = 5.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 401 FFIVKQNGGSDRESVSETGHRFPEQERWHEEE 306
F+I+ + G E SE H+ H++E
Sbjct: 651 FYIMFKRKGKSTEHGSEVAHQSSSSSNHHDDE 682
>AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein
protein.
Length = 814
Score = 22.2 bits (45), Expect = 7.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 307 SSSCHLSCSGKRWPVS 354
+SSC L +G RW VS
Sbjct: 447 ASSCFLPEAGARWDVS 462
>AJ549085-1|CAD70159.1| 529|Anopheles gambiae thioredoxin-disulfide
reductase protein.
Length = 529
Score = 22.2 bits (45), Expect = 7.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 407 NCFFIVKQNGGSDRESVSETGHR 339
N + + G SD+ V ET HR
Sbjct: 331 NAGVVTAEGGKSDKLEVDETDHR 353
>AJ549084-1|CAD70158.1| 505|Anopheles gambiae thioredoxin-disulfide
reductase protein.
Length = 505
Score = 22.2 bits (45), Expect = 7.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 407 NCFFIVKQNGGSDRESVSETGHR 339
N + + G SD+ V ET HR
Sbjct: 307 NAGVVTAEGGKSDKLEVDETDHR 329
>AJ459821-1|CAD30858.1| 502|Anopheles gambiae thioredoxin reductase
protein.
Length = 502
Score = 22.2 bits (45), Expect = 7.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 407 NCFFIVKQNGGSDRESVSETGHR 339
N + + G SD+ V ET HR
Sbjct: 304 NAGVVTAEGGKSDKLEVDETDHR 326
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 22.2 bits (45), Expect = 7.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 304 PSSSCHLSCSGKRWPVSETLSLSDPPFCLTMK 399
P + H C+G+RW +T + F L +K
Sbjct: 234 PINRQHTPCAGRRW---KTKQFRENSFLLALK 262
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,792
Number of Sequences: 2352
Number of extensions: 8455
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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