Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_I13
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical pr... 151 2e-37
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.3
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 2.3
Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 27 5.4
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 27 5.4
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z68270-11|CAJ90499.1| 394|Caenorhabditis elegans Hypothetical p... 26 9.4
Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical p... 26 9.4
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 26 9.4
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 26 9.4
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 26 9.4
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 26 9.4
AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear recep... 26 9.4
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 26 9.4
AL031628-1|CAA20973.1| 416|Caenorhabditis elegans Hypothetical ... 26 9.4
AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear recep... 26 9.4
AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical ... 26 9.4
>Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical
protein F40F11.1 protein.
Length = 155
Score = 151 bits (366), Expect = 2e-37
Identities = 70/115 (60%), Positives = 87/115 (75%), Gaps = 3/115 (2%)
Frame = -2
Query: 382 MADQTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 212
M++QTE+AF KQ TV LN K + +K R+ + VGLGFK PR+A+EGTYIDKKCP+
Sbjct: 1 MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWA 60
Query: 211 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLAPCLQ 47
GNV IRG ILTGVV K KM RTIV+RRDYLHY+ KY R+EKRH+N+ H +P +
Sbjct: 61 GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFR 115
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3
Query: 54 AYRDVEIGEIVTIGXCK 4
A+RD+ G++VTIG C+
Sbjct: 113 AFRDIHPGDLVTIGECR 129
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 159 RCRELS*SAAITFTTYPNTIGSRNGTGICPCIWRLAYRDV 40
+C + + AA T TT I +NG +C C+ L Y++V
Sbjct: 564 KCVQANNEAATTSTTTSQCIKEKNGETVCKCL--LGYKNV 601
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 159 RCRELS*SAAITFTTYPNTIGSRNGTGICPCIWRLAYRDV 40
+C + + AA T TT I +NG +C C+ L Y++V
Sbjct: 564 KCVQANNEAATTSTTTSQCIKEKNGETVCKCL--LGYKNV 601
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 159 RCRELS*SAAITFTTYPNTIGSRNGTGICPCIWRLAYRDV 40
+C + + AA T TT I +NG +C C+ L Y++V
Sbjct: 564 KCVQANNEAATTSTTTSQCIKEKNGETVCKCL--LGYKNV 601
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 28.3 bits (60), Expect = 2.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 310 SSCHLSCSGKRWPVSETLSLSD 375
+SC++ CSG++W E S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.3 bits (60), Expect = 2.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 310 SSCHLSCSGKRWPVSETLSLSD 375
+SC++ CSG++W E S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032
>Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical
protein R06B9.1 protein.
Length = 423
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 298 ACPSSSCHLSCSGKRWPVSETLSLSDPP 381
AC S LS WP S TL L+ PP
Sbjct: 92 ACKDGSNELSAGDYVWPFSYTLPLNVPP 119
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 172 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLAPCLQG 44
V+ + ++ I +RR Y +++F +R+ +S PC QG
Sbjct: 605 VEYLGLRENIRVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQG 647
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 172 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLAPCLQG 44
V+ + ++ I +RR Y +++F +R+ +S PC QG
Sbjct: 542 VEYLGLRENIRVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQG 584
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 277 NQHSYGDACPSSSCHLSCSGKRW 345
+QH Y + + CH SC+ K W
Sbjct: 207 HQHCYQNGKSMAKCHESCNDKCW 229
>Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical
protein C27C12.4 protein.
Length = 450
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 170 SENEDAENYRDPPRLPSLPTQIQ*VRETAQEYVRAFGALL 51
S+NED E+ DP LP + + E +R+ ALL
Sbjct: 199 SQNEDIESSEDPLILPETENDVTLPASSVSEQLRSTIALL 238
>Z68270-11|CAJ90499.1| 394|Caenorhabditis elegans Hypothetical
protein ZC410.1b protein.
Length = 394
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -2
Query: 265 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 86
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 149 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 205
Query: 85 HRNM 74
+NM
Sbjct: 206 EKNM 209
>Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical
protein ZC410.1a protein.
Length = 459
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -2
Query: 265 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 86
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 214 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 270
Query: 85 HRNM 74
+NM
Sbjct: 271 EKNM 274
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 277 NQHSYGDACPSSSCHLSCSGKRW 345
+QH Y + + CH SC+ K W
Sbjct: 207 HQHCYQNGKSMAKCHESCNDKCW 229
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 114 YPNTIGSRNGTGICPCIW 61
YPNT+GS G C+W
Sbjct: 57 YPNTLGSYGGDKQVQCLW 74
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 114 YPNTIGSRNGTGICPCIW 61
YPNT+GS G C+W
Sbjct: 70 YPNTLGSYGGDKQVQCLW 87
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 277 NQHSYGDACPSSSCHLSCSGKRW 345
+QH Y + + CH SC+ K W
Sbjct: 258 HQHCYQNGKSMAKCHESCNDKCW 280
>AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 459
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -2
Query: 265 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 86
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 214 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 270
Query: 85 HRNM 74
+NM
Sbjct: 271 EKNM 274
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 114 YPNTIGSRNGTGICPCIW 61
YPNT+GS G C+W
Sbjct: 58 YPNTLGSYGGDKQVQCLW 75
>AL031628-1|CAA20973.1| 416|Caenorhabditis elegans Hypothetical
protein Y102A5D.1 protein.
Length = 416
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 356 SETGHRFPEQERWHEEEGHA 297
+E GHR P+ +W++E HA
Sbjct: 390 TELGHRKPKGNQWNKEAPHA 409
>AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 290
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -2
Query: 265 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 86
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 166 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 222
Query: 85 HRNM 74
+NM
Sbjct: 223 EKNM 226
>AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical
protein C52A10.2 protein.
Length = 544
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 98 PIVFG*VVKVIAADHDSSLHLHFLNDAGEDAAADRNV 208
PIVFG AA+H S L F GE + DR V
Sbjct: 430 PIVFGKNRPFNAANHGSDLRYIFGEGTGEFSKEDRQV 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,906,586
Number of Sequences: 27780
Number of extensions: 200506
Number of successful extensions: 571
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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