Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_I12
(637 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 250 2e-65
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 208 1e-52
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 194 2e-48
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 175 6e-43
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 173 3e-42
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 167 1e-40
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 167 2e-40
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 151 1e-35
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 143 4e-33
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 130 3e-29
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 129 6e-29
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 123 3e-27
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 123 4e-27
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 122 1e-26
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 120 2e-26
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 112 8e-24
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 109 5e-23
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 101 1e-20
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 99 8e-20
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 95 1e-18
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 95 2e-18
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 94 3e-18
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 93 7e-18
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 88 1e-16
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 87 3e-16
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 87 4e-16
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 85 1e-15
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 82 9e-15
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 81 2e-14
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 81 3e-14
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 80 5e-14
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 76 6e-13
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 73 6e-12
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 67 4e-10
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 60 4e-08
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 8e-08
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 57 3e-07
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 56 9e-07
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 54 4e-06
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 53 5e-06
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 52 9e-06
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 51 2e-05
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 51 3e-05
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 51 3e-05
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 49 8e-05
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 6e-04
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 46 6e-04
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 45 0.001
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 44 0.002
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 44 0.002
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 43 0.005
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 43 0.005
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 43 0.007
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 42 0.016
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 41 0.022
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 40 0.038
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 40 0.038
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 40 0.050
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 40 0.066
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 40 0.066
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 40 0.066
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 40 0.066
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 39 0.088
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 39 0.12
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.15
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 38 0.20
UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat pr... 38 0.27
UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6; Anaplasm... 38 0.27
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 38 0.27
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 37 0.47
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 37 0.47
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.47
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 36 0.82
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 36 0.82
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 35 1.9
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.9
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.5
UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n... 34 2.5
UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;... 34 3.3
UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19; Bacteri... 34 3.3
UniRef50_Q1MPQ0 Cluster: 50S ribosomal protein L6; n=1; Lawsonia... 33 4.4
UniRef50_A5FRS2 Cluster: SMC domain protein; n=3; Dehalococcoide... 33 5.8
UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6; Mycoplas... 33 5.8
UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 5.8
UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 5.8
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 7.6
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 250 bits (613), Expect = 2e-65
Identities = 122/179 (68%), Positives = 144/179 (80%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 398
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 397 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 218
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 217 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDLEGL 41
IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAA +Q K + + L+GL
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNK--DIRKFLDGL 177
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 208 bits (507), Expect = 1e-52
Identities = 97/162 (59%), Positives = 127/162 (78%), Gaps = 2/162 (1%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 404
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 403 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 224
+G++KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 223 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
KYIRRV+M PGV S QKDELI+EGN +E VS+SAA +Q
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQ 162
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 194 bits (472), Expect = 2e-48
Identities = 89/158 (56%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWF 401
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 400 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 221
G+++ +AA+RT SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 220 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 107
+R+V M GVT++ S K KDEL+++GN +E VS SAA
Sbjct: 121 KVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAA 158
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 175 bits (427), Expect = 6e-43
Identities = 88/170 (51%), Positives = 117/170 (68%), Gaps = 2/170 (1%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 398
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 397 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGE 224
+K +AA+RTV S V+NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 223 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKK 74
K IR V + GVT+ S KDE+++ GNS+EDVS +AA +Q R K
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNK 170
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 173 bits (421), Expect = 3e-42
Identities = 80/172 (46%), Positives = 117/172 (68%)
Frame = -1
Query: 532 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 353
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 352 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 173
ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 172 PKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDLEGLDEMRKQLL 17
K KDE+++ GNSLE +S S A +Q R K + + L+G+ + +L
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQ--LRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 167 bits (407), Expect = 1e-40
Identities = 74/126 (58%), Positives = 96/126 (76%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 398
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 397 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 218
+KE+AA+RTVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 217 IRRVKM 200
+R V +
Sbjct: 121 VRPVPL 126
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 167 bits (406), Expect = 2e-40
Identities = 81/159 (50%), Positives = 112/159 (70%)
Frame = -1
Query: 574 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 395
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGS 61
Query: 394 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 215
+K A +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 214 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
R +K PGVTV S KDE+I+EGNSLE+VS SAA ++
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIK 160
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 151 bits (367), Expect = 1e-35
Identities = 73/165 (44%), Positives = 99/165 (60%)
Frame = -1
Query: 568 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 389
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGK 61
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRR 121
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKK 74
++ PGVT+ S KDELI+ G S+EDVS +AA + + K
Sbjct: 122 IECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNK 166
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 143 bits (346), Expect = 4e-33
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 9/163 (5%)
Frame = -1
Query: 556 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 404
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 403 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 224
+G++++ A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 223 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQA 95
K R ++M GV V KDE+ +EGN +E VS SAA + A
Sbjct: 129 KRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHA 169
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 130 bits (314), Expect = 3e-29
Identities = 74/196 (37%), Positives = 111/196 (56%), Gaps = 10/196 (5%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 425
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 424 LLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIE 245
+ V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +E
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 244 IRNFLGEKYIRRVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTG 68
I+NFLGEK IR +K PGVT+ N ++K+ L ++GN L +VS + A + K
Sbjct: 121 IKNFLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDI 180
Query: 67 EQERDLEGLDEMRKQL 20
Q D + E R ++
Sbjct: 181 RQFLDGIYVSEKRLEI 196
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 129 bits (311), Expect = 6e-29
Identities = 68/188 (36%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 401
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 400 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 221
KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Query: 220 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDLEGL 41
IR++ M GV + + +KDE+ + G+ L VS +AA +Q + K + + L+G+
Sbjct: 121 RIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNK--DLRKFLDGI 178
Query: 40 DEMRKQLL 17
+ K+ L
Sbjct: 179 YIIMKKNL 186
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 123 bits (297), Expect = 3e-27
Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Frame = -1
Query: 481 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 311
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 310 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 131
MRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 130 EDVSSSAAXM 101
+ VS SAA +
Sbjct: 212 DLVSQSAALL 221
Score = 33.9 bits (74), Expect = 3.3
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 467
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 123 bits (296), Expect = 4e-27
Identities = 66/160 (41%), Positives = 103/160 (64%)
Frame = -1
Query: 556 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 377
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 376 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 197
VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKIL 125
Query: 196 PGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDK 77
PGVTV + E+ +EG E V +AA ++ R K
Sbjct: 126 PGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITK 162
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 122 bits (293), Expect = 1e-26
Identities = 64/120 (53%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Frame = -1
Query: 577 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 410
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 409 KWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 230
WFG K A +RTVCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 120 bits (290), Expect = 2e-26
Identities = 67/160 (41%), Positives = 101/160 (63%)
Frame = -1
Query: 556 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 377
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 376 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 197
RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKIL 125
Query: 196 PGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDK 77
PGVTV + E+I+EG E V +AA ++ R K
Sbjct: 126 PGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITK 162
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 112 bits (269), Expect = 8e-24
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 1/179 (0%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWF 401
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 400 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 221
+KK+ A V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGER 117
Query: 220 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDLEG 44
R + PG V +KD++I+EG L+ V+ +AA + K EG
Sbjct: 118 GKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGKRALSPHGREG 173
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 109 bits (262), Expect = 5e-23
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Frame = -1
Query: 592 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 419
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 418 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 239
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 238 NFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXM 101
NFLGEK ++R +M G V ++KD ++IEG SL DVS SA +
Sbjct: 133 NFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTI 177
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 101 bits (242), Expect = 1e-20
Identities = 61/161 (37%), Positives = 94/161 (58%)
Frame = -1
Query: 556 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 377
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 376 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 197
T+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKII 121
Query: 196 PGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKK 74
GVTV DE+ I G E V ++AA ++ R K+
Sbjct: 122 EGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKR 159
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 99.1 bits (236), Expect = 8e-20
Identities = 48/165 (29%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 401
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 400 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 221
+++ A + ++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK
Sbjct: 63 ADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEK 120
Query: 220 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXR 86
IRR K+ PGV V + +++++EG+ + +V+ +AA +++ +
Sbjct: 121 NIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTK 162
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 95.1 bits (226), Expect = 1e-18
Identities = 55/151 (36%), Positives = 92/151 (60%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 371
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 370 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 191
T SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+ G
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-G 124
Query: 190 VTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
T V +E+++ G + EDV +AA ++
Sbjct: 125 ETKVK--VSGNEIVVSGINKEDVGQTAANIE 153
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 94.7 bits (225), Expect = 2e-18
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Frame = -1
Query: 574 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 416
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 415 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 236
WFG++K LA + T+ V+NMI GVT G++YKM VY+HFPI +E +
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNG 122
Query: 235 FLGEKYIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVS 119
F+G K + V GV + N KDE+ IEG +LEDVS
Sbjct: 123 FMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVS 162
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 93.9 bits (223), Expect = 3e-18
Identities = 52/182 (28%), Positives = 98/182 (53%), Gaps = 3/182 (1%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 398
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 397 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK- 221
+++E + T SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKA 117
Query: 220 -YIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDLE 47
I+ + V V + K + E+++E E A+ ++ R K ++ R +
Sbjct: 118 PIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTD 177
Query: 46 GL 41
G+
Sbjct: 178 GI 179
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 92.7 bits (220), Expect = 7e-18
Identities = 56/166 (33%), Positives = 100/166 (60%), Gaps = 5/166 (3%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 413
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 412 EKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNF 233
E + K+E A + T ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NF
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENF 117
Query: 232 LGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQA 95
LG K + + GV V K K++++IEG E VS+ AA +QA
Sbjct: 118 LGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQA 161
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 404
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 403 FGSKKELAAVRTVCSHVENMIKGVTKG 323
+G++KELA V T+CS V+N IK VT G
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 87.0 bits (206), Expect = 3e-16
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 404
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 403 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 224
+ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGL 120
Query: 223 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
K I + V V + K E+I+ +E + ++ +Q
Sbjct: 121 KRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQ 162
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 86.6 bits (205), Expect = 4e-16
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Frame = -1
Query: 571 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 407
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 406 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 227
KK A V T H+EN+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+G
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIG 133
Query: 226 EKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKK 74
EK+ RR K+ V S + ++ + G +E+ +AA ++ + +K
Sbjct: 134 EKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRK 181
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 50/98 (51%), Positives = 61/98 (62%)
Frame = -1
Query: 391 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 212
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNV--------------------- 68
Query: 211 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
V+M GV S QKDELI+EGN E VS+SAA +Q
Sbjct: 69 -VQMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQ 105
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 82.2 bits (194), Expect = 9e-15
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Frame = -1
Query: 553 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 374
K+ +P+G+T V VTV L R F+H +++R + L +V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALA 68
Query: 373 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 194
T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Query: 193 --GVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXR 86
V + K ++ + G E V +AA ++ R
Sbjct: 126 WSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCR 163
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 81.4 bits (192), Expect = 2e-14
Identities = 47/160 (29%), Positives = 89/160 (55%)
Frame = -1
Query: 553 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 374
+V+IP+G+TV ++ +GP G +NF+++ V I + + ++ ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAIL 70
Query: 373 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 194
T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R +
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMG 128
Query: 193 GVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKK 74
V+ PK +D +++ G D++ +AA ++ + K
Sbjct: 129 NTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNK 165
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 80.6 bits (190), Expect = 3e-14
Identities = 51/160 (31%), Positives = 86/160 (53%)
Frame = -1
Query: 553 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 374
+++IP+ + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 373 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 194
T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR +
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-H 120
Query: 193 GVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKK 74
G T V +EL + G +E V +AA ++ R + K
Sbjct: 121 GDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDK 158
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 79.8 bits (188), Expect = 5e-14
Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 1/147 (0%)
Frame = -1
Query: 511 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 335
R++ VKG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 334 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE 155
V G+ K++ VYAHFPI + +G ++I + NF GE+ R+ K+ G VV+ + ++
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIVGGTKVVS---KGED 120
Query: 154 LIIEGNSLEDVSSSAAXMQAXXRQDKK 74
+I+ G+ L DVS +AA ++ + K
Sbjct: 121 VIVTGHVLTDVSQTAANLEQGTKVKNK 147
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 76.2 bits (179), Expect = 6e-13
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Frame = -1
Query: 568 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 404
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 403 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 224
++++ A + + +++ENM KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
Query: 223 KYIRRVKMA-PGVTVVNSPKQKDELIIEGNSLEDVSSSAAXM-QAXXRQDK 77
R ++ P T V Q ++I+ G E V +AA + QA +D+
Sbjct: 136 NVPRVAEIVDPENTEV--IVQGQDIIVRGIDKEAVGQTAANLEQATYIKDR 184
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 72.9 bits (171), Expect = 6e-12
Identities = 45/151 (29%), Positives = 84/151 (55%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 371
++IP + V + ++++ L++ F V + +V +K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 370 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 191
T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-G 125
Query: 190 VTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
T V+ + D L + G S +DV +AA ++
Sbjct: 126 ETQVS--VKGDRLFLNGPSKKDVGETAANIE 154
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 66.9 bits (156), Expect = 4e-10
Identities = 44/152 (28%), Positives = 76/152 (50%)
Frame = -1
Query: 553 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 374
++K+PD + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 373 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 194
T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVD 125
Query: 193 GVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
G V + D + I G + +AA ++
Sbjct: 126 GCKV---SVKGDRITINGIDKRKIGETAANIE 154
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 60.1 bits (139), Expect = 4e-08
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 404
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 403 FGSKKELAAVRTVCSHVENMIKGV 332
+ K LA T+ SHV+NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = -1
Query: 361 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 182
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 181 VNSPKQKDELI 149
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/140 (25%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Frame = -1
Query: 577 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKW 404
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL ++
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RY 56
Query: 403 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 224
+++ VC +N I G G++Y +R + F +G +++ ++NFL
Sbjct: 57 GMAQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDR 115
Query: 223 KYIRRVKMAPGVTVVNSPKQ 164
+ K A + ++P++
Sbjct: 116 SMLGDTKCAETLLRGSAPRK 135
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 55.6 bits (128), Expect = 9e-07
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 389
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
A T + V NM++GV++GF+ K++ V + T N LG +
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLA------LGFSHPVD 116
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQER 56
++ G+T +P Q D ++I G + V AA ++ R + G+ R
Sbjct: 117 YELPNGIT-AETPSQTD-ILIRGIDKQLVGQVAAEIRDFRRPEPYKGKGVR 165
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 53.6 bits (123), Expect = 4e-06
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 389
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
A T S + NM++GV+KGF+ + V + + GN ++ L Y
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHP 113
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDLEGLDEMR 29
V++ P + + +++++G E V + AA ++A + G+ R EG R
Sbjct: 114 VEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIRAVRSPEPYKGKGIR-YEGEVVRR 172
Query: 28 KQ 23
K+
Sbjct: 173 KE 174
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 53.2 bits (122), Expect = 5e-06
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 401
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 400 GSKKELAAVR-TVCSHVENMIKGVTKGFQYKM 308
+K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 52.4 bits (120), Expect = 9e-06
Identities = 47/156 (30%), Positives = 75/156 (48%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
VA +KIP G+ V+V + +TVKG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 385 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 206
A T + + NM++GV GFQ K+ V + EG ++ +G + +
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNI 116
Query: 205 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQ 98
+M G+T V +P Q E+I++G + VS AA ++
Sbjct: 117 EMPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIR 150
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 371
+KIPD + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 370 TVCSHVENMIKGVTKGF 320
S + NM+KGVT+GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 50.8 bits (116), Expect = 3e-05
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = -1
Query: 550 VKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 374
+ IP G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 373 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 194
T + + NM+KGVT+GF+ + V + +G + I N +G + ++ P
Sbjct: 67 GTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEP 120
Query: 193 GVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGE 65
G+ ++ + + +I+ G E V AA ++ D G+
Sbjct: 121 GIEII--VEGNNRIIVRGADKERVGQVAANIRRVREPDAYQGK 161
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/89 (33%), Positives = 49/89 (55%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 385 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 299
A T S + NM+ GV+KGF+ + +
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEII 90
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 49.2 bits (112), Expect = 8e-05
Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKK 389
+ N V IP+ + V + ++ +KGP G L + + DI ++ N + V++ KK
Sbjct: 12 IGNIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKK 68
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
A + NMIKGV+ GF+ K+ + F N + N I+ + +G +
Sbjct: 69 NRALHGLYRMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIM 125
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGE 65
+K+ +T+ + ++I++ + + AA +++ + + G+
Sbjct: 126 IKLPQSITLEVKMDKNPQIILKSYDKQLLGIVAAKIRSLRKPEPYKGK 173
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Frame = -1
Query: 511 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 359
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 358 HVENMIKGVTKG 323
++NMI+G+T G
Sbjct: 113 QIKNMIRGITSG 124
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 401
+A + + +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 400 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 299
+K T S + NM+ GVT+G++ ++ V
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGYKKELEIV 97
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ + IPD ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 385 LAAVRTVC-SHVENMIKGVTKGFQYKMRAV 299
+C + V NMI+GV+KG+ K+ V
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGYSKKLEIV 90
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 44.4 bits (100), Expect = 0.002
Identities = 36/173 (20%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ + + +P + + + + + VKGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 385 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
+ +C + V NM+ GV+KGF+ ++ V + +G+ + + N +G +
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLELVGVGYR---AAIQGSKL--VLN-VGYSHPVE 114
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDL 50
+ PG+ + + + + +++ G E V ++AA ++A + G+ R L
Sbjct: 115 IPFPPGIQI--AVEGNNIIVVSGTDKELVGNTAARIRAVRPPEPYKGKGIRYL 165
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 44.4 bits (100), Expect = 0.002
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ +K+P G+ V + VTVKGP+G L R+F+ V I L+ G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKA 60
Query: 385 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
+ + + ++NMI GV GF + V + +G+ ++ +
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGFDKNLEIVGVGMRAD---KDGDKVV-----FKVGFSHS 112
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGE 65
V +AP + S ++ + G + EDV AA +++ + D G+
Sbjct: 113 VTVAPPAGITLSVDGTTKVKVSGINKEDVGQMAAEIRSIRKPDHYMGK 160
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 389
V N+ +++P+ + V +K R ++V+GP+G L+ F H + + N + K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEI 60
Query: 388 ELAAVR-TVCSHVENMIKGVTKGFQYKMRAV 299
+ + T + + NM++GV+KGFQ ++ V
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 43.2 bits (97), Expect = 0.005
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 380
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 379 AVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVK 203
A + S V NM+ GV++G++ ++ V + + +GN IIE+ LG + ++
Sbjct: 68 AFHGLYRSLVHNMVVGVSEGYKKELELVGVGYR---ASNQGN-IIELA--LGYTHNIFIQ 121
Query: 202 MAPGVTV-VNSPKQKDELII 146
+ V V S + K+ LII
Sbjct: 122 LPAEVKVETKSERNKNPLII 141
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 42.7 bits (96), Expect = 0.007
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ + IPD + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 385 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
+C + V NM+ GV++G+ K+ V + +G +++ + Y
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGYSKKLEIVGVG---SRAQVKGKTLV-----VSAGYSHP 112
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQA 95
V++ P + + + + + G E V + AA ++A
Sbjct: 113 VEVVPPEGITFTVENNTNVTVSGTDKELVGNEAAKIRA 150
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 41.5 bits (93), Expect = 0.016
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 385 LAAVRTVCSHVENMIKGVTKGF--QYKMRAV 299
T + + NM+ GV++GF + +MR V
Sbjct: 62 KTIHGTTRALLNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 41.1 bits (92), Expect = 0.022
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-----LAVDIRMVNPRLLKVEKWF 401
+ N+ V IP G+TV + R + V+GP+G K +FKH +AVD N ++ +
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKHRPEVKVAVD-SDTNQVIVSRDGDD 60
Query: 400 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 221
+E + V NM+ GV G++ K+ V + + + +++R +
Sbjct: 61 RPSREFHGLTRAI--VANMLVGVKDGYEKKLEIV----GVGYLASISGDTLQLRVGYANE 114
Query: 220 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGE 65
R++ P V P Q ++I+G + V AA +++ + + G+
Sbjct: 115 LHRKI---PTDLTVTCPDQ-THVVIQGCDKQSVGQFAAEIRSLRKPEPYKGK 162
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 40.3 bits (90), Expect = 0.038
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ + + IP +T ++ + + VKGP+G L R + + + L+K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 385 LAAV-RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
L + RT+ V NM+ GV+KGF+ ++ + +G ++I L Y +
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKRLEIQGVGYR---AQVQGKNLI-----LNVGYSKP 112
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQA 95
V+M P + + + +II G E V + AA ++A
Sbjct: 113 VEMNPPQGITVAVENNTNVIISGIDKEVVGNIAAQIRA 150
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 40.3 bits (90), Expect = 0.038
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 389
V + IP+G+ V + V + GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQYKM 308
A T S + NMI GV +GF+ K+
Sbjct: 61 ARAMWGTARSIICNMITGVKEGFKLKL 87
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 39.9 bits (89), Expect = 0.050
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 385 LAAVRTVCSHVENMIKGVTKGF 320
A + V N +KGV+ G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 39.5 bits (88), Expect = 0.066
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -1
Query: 577 MKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWF 401
M+QI + + IP+ + + ++ + V G G L F H + ++ N + L V +
Sbjct: 1 MEQISGYKSIICIPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRY 59
Query: 400 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 299
+ A + T CS + +MI GVT+GF K++ +
Sbjct: 60 RNHVNRALLGTTCSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 39.5 bits (88), Expect = 0.066
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 389
V + + +P + +++K+ LV +KG GVL N L A+++ + ++ + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANE---EKH 60
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQYKM 308
T S +ENMI GV+KGF+ ++
Sbjct: 61 TKQLHGTTNSIIENMIIGVSKGFKKEL 87
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 39.5 bits (88), Expect = 0.066
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ + V IP G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 385 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 299
+ V NM+ GVT GF+ + V
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELV 90
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 39.5 bits (88), Expect = 0.066
Identities = 21/86 (24%), Positives = 44/86 (51%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ Q + +P +T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 385 LAAVRTVCSHVENMIKGVTKGFQYKM 308
+ +NM+ GV+KGF+ K+
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKL 130
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 39.1 bits (87), Expect = 0.088
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ +++ D V VK ++ V GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 385 LAAVRTVCSHVENMIKGVTKGFQYKM 308
A V NM++GVTKGF K+
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGFTRKL 87
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 38.7 bits (86), Expect = 0.12
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
V + ++IP G V + VKG G L R F V+I+ N + + VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQ-ISVERLNELKPT 61
Query: 385 LAAVRTVCSHVENMIKGVTKGFQYKMR 305
T + + NM+KGV++GF+ +++
Sbjct: 62 KQLHGTTNALIANMVKGVSEGFKKELK 88
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 38.3 bits (85), Expect = 0.15
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -1
Query: 517 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 341
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 340 KGVTKGF 320
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 37.9 bits (84), Expect = 0.20
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 119 RDIFQRVAFND*FILLFWRVNDSHTRCHLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEV 292
R+ FQ V N+ FILL R T S+ F TQE++ N +T+ + VN E+
Sbjct: 54 RNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVILTIFFNNVNVNWEM 113
Query: 293 SIHSTHLVLEAFSYSFNHV 349
I+ +HLV FS + + V
Sbjct: 114 RINKSHLVFVTFSDTSDQV 132
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 37.9 bits (84), Expect = 0.20
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGS 395
+A + + P+ + V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 394 KKELAAVRTVCSHVENMIKGVTKGF 320
A T+ + V+NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
BspA-like leucine rich repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 651
Score = 37.5 bits (83), Expect = 0.27
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 613 AFSGSCVKQSPNMKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGV 479
+FS C KQ N+K I K+K IPDG S L+TVK P+GV
Sbjct: 590 SFSTDCFKQCTNLKSIAIPLKLKEIPDGCFAGCSS-LITVKIPKGV 634
>UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6;
Anaplasmataceae|Rep: 50S ribosomal protein L6 -
Anaplasma marginale (strain St. Maries)
Length = 181
Score = 37.5 bits (83), Expect = 0.27
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHV-KSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKWFGS 395
V +++P+G+ V V VTV G G +F L IR V LL V + S
Sbjct: 4 VGAMPIEVPEGVKVDVCDGNSVTVIGKDGT-SSSFS-LCHGIRAVLDGSTLLLVNERQSS 61
Query: 394 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 215
+ + S + N IKG++KGF ++ + + C GN + + F+G +
Sbjct: 62 PRAKVMWGSYRSGISNAIKGLSKGFSVELEVNGVGYRVVC----GNKYLSM--FVGFSHG 115
Query: 214 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGE 65
R + G+ + PK +L+I+G+ V AA + + R D G+
Sbjct: 116 VRYVIPEGIE-IKCPK-PTQLVIKGSDKVKVHMVAADICSIRRYDPYKGK 163
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 37.5 bits (83), Expect = 0.27
Identities = 37/152 (24%), Positives = 68/152 (44%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 371
+++PD +TV + +TVKGP+G L R F + N + + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 370 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 191
T +++ +MI+GV G++ ++ + + +GN I L Y V +
Sbjct: 65 TERANLASMIEGVLNGYKKTLKLIGVGYR---AQAQGNKIT-----LNVGYSHPVVLTAP 116
Query: 190 VTVVNSPKQKDELIIEGNSLEDVSSSAAXMQA 95
V ++ +EG S +DV AA ++A
Sbjct: 117 EGVSVKATSATDVEVEGVSKQDVGQFAAEIRA 148
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 36.7 bits (81), Expect = 0.47
Identities = 34/171 (19%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKK 389
VA + IP+ + + + +V VKG +G L +++D V +++ ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLD---VADKVITIKYDEENQQ 60
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 209
+A T S + NM+ GV++GF+ K+ + + ++E+ LG + +
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLELIGVGYRAKA----SGKLLELT--LGFSHPVK 114
Query: 208 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQER 56
++ P V +P Q E++++ ++ + + +AA +++ + G+ R
Sbjct: 115 YQL-PDEVEVETPSQ-TEVVLKSHNKQILGQAAAEIRSFRPPEPYKGKGVR 163
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 36.7 bits (81), Expect = 0.47
Identities = 30/141 (21%), Positives = 61/141 (43%)
Frame = -1
Query: 559 NQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 380
++K++IP + + +K + ++GP G + N H N LL +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 379 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 200
+ S ++ IKG+ +GF K+ E N I++ LG + +++
Sbjct: 90 FLNLYKSLIKLKIKGILQGF--KLNLFLKGLGFKAFIEEKNLILK----LGYSHSITIEI 143
Query: 199 APGVTVVNSPKQKDELIIEGN 137
+ ++N Q ++LI N
Sbjct: 144 PENIKIIN---QTNKLIFSSN 161
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 36.7 bits (81), Expect = 0.47
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ + + +P +T+ + + VTVKGP+G L R F ++ +V V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRP 60
Query: 385 LAAVRTVC-SHVENMIKGVTKGFQYKM 308
+C + + NM++GV++GF K+
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGFTKKL 87
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 35.9 bits (79), Expect = 0.82
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRLLKVEKWFGS 395
+ N+ + I G+ V + + V+VKGP+G LK +VD + + + S
Sbjct: 4 IGNKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFS 63
Query: 394 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 215
K E R++ + NMI GV+ G++ ++ F +GN ++ LG +
Sbjct: 64 KAEHGLNRSL---ISNMIVGVSTGWKKELEIRGTGFR---GAVQGN---KLNLNLGYSHP 114
Query: 214 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGEQER 56
++ G+ V + + ++I+EG+ + V +A ++ + D G+ R
Sbjct: 115 INYEIPDGIKV--TMPEPTKIIVEGSDKQLVGQVSANIRFYRKPDAYKGKGVR 165
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 35.9 bits (79), Expect = 0.82
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+ + + +P L+ + +TV GP+G L R +++ ++N + K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKM 60
Query: 385 LAAVRTVC-SHVENMIKGVTKGFQYKMR 305
+ + + + + NMI+GV+ GF K++
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGFFKKLQ 88
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 34.7 bits (76), Expect = 1.9
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 386
+A + + G+ V V + +T+KG +G L R AV +++ + ++ G K
Sbjct: 4 IAKAPITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDA 61
Query: 385 LAAVRTVCSHVENMIKGVTKGFQ 317
A T ++V NM+ GVT GF+
Sbjct: 62 WAQAGTARANVNNMMIGVTTGFK 84
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 473
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 2.5
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 339 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 512
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 513 DFT 521
F+
Sbjct: 82 CFS 84
>UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n=2;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L6 -
Emiliania huxleyi
Length = 181
Score = 34.3 bits (75), Expect = 2.5
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR---NFKHLAVDIRMVNPRLLKVEKWFGS 395
+ Q + IPD + + ++ + V V GP+G L R +F +D L K E+ S
Sbjct: 4 IGKQYISIPDKVNIRLEGQKVFVDGPKGKLTRILPSFICCTIDEPEKKVFLEKAEENKLS 63
Query: 394 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 215
+ RT+ S NM+ GV+ G+ K+ + +G +I L Y
Sbjct: 64 QALYGLSRTLLS---NMVTGVSSGWHKKLTIAGVGYR---AQLDGKDLI-----LNMGYS 112
Query: 214 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAXMQA 95
VKM + S + + + G E V AA +++
Sbjct: 113 HPVKMVTPPALSVSVESPTSITVSGLEKEAVGEFAAKIRS 152
>UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;
n=1; Reclinomonas americana|Rep: Mitochondrial 60S
ribosomal protein L6 - Reclinomonas americana
Length = 185
Score = 33.9 bits (74), Expect = 3.3
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKW-FGSK 392
+ ++++KIP +++ + + V+G G L+ ++ + ++ + N + L ++ G+K
Sbjct: 4 IGSKQIKIPKNVSIDLSMNKIYVRGDLGKLELPLNNINIHLKNIENDQFLILDPINTGTK 63
Query: 391 KELAAV----RTVCSHVENMIKGVTKGFQYKMRAV 299
K+ A T + +ENM+ GV+KG+ + V
Sbjct: 64 KQKTASYIMWGTYRTLIENMLIGVSKGYSKTIELV 98
>UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19;
Bacteria|Rep: 50S ribosomal protein L6 - Gloeobacter
violaceus
Length = 191
Score = 33.9 bits (74), Expect = 3.3
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG--SKKELAA 377
+ IP + V + R V VKGP+G L +V++ + RLL + ++++
Sbjct: 9 IAIPPKVEVTLDGRRVVVKGPKGTLDLTLPD-SVEVVREDGRLLVTRRGESRRAREQHGL 67
Query: 376 VRTVCSHVENMIKGVTKGFQYKMR 305
RT+ V NM+ GVT GF M+
Sbjct: 68 GRTL---VANMVTGVTTGFTKPMQ 88
>UniRef50_Q1MPQ0 Cluster: 50S ribosomal protein L6; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: 50S ribosomal protein L6
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 181
Score = 33.5 bits (73), Expect = 4.4
Identities = 35/162 (21%), Positives = 73/162 (45%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 371
+ IP G+ + + +++KGP+ L L + +L F +++ LA
Sbjct: 9 IMIPAGVEITFGEKNISIKGPKATLVTPKCELLSYEHKEDKIILTCN--FDTRESLAQYG 66
Query: 370 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 191
+ + N I+GVTKGF + + + V+ +GN I+E+ +G + +++ G
Sbjct: 67 LRRTLLANCIEGVTKGFSKTLEVIGVGYR---VSVKGN-IVELS--VGYSHPVHIELPDG 120
Query: 190 VTVVNSPKQKDELIIEGNSLEDVSSSAAXMQAXXRQDKKTGE 65
+T + + +L I G+ V AA ++ + + G+
Sbjct: 121 IT---AKAEGQKLTIMGSDKVLVGEMAARIRRIRKPEPYKGK 159
>UniRef50_A5FRS2 Cluster: SMC domain protein; n=3;
Dehalococcoides|Rep: SMC domain protein -
Dehalococcoides sp. BAV1
Length = 859
Score = 33.1 bits (72), Expect = 5.8
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Frame = -1
Query: 349 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 170
N+I G+ K + A + V E I+ NF +Y R + +T
Sbjct: 524 NLIAGIEKQLNERSYAAAEQASLAVVEKE----IQGLNFDNAEYTRNQQNLADLTPFEEK 579
Query: 169 KQK-DELI----IEGNSLEDVSSSAAXMQAXXRQDKKTGEQERDLEGLDEM 32
K+K DE I +E +SL+ SS+ A + A R+D K EQ+ L+ L E+
Sbjct: 580 KRKLDEAINRLPLENDSLKKASSALAELTA--RRDNKLNEQQTLLKELAEL 628
>UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L6 -
Mycoplasma genitalium
Length = 184
Score = 33.1 bits (72), Expect = 5.8
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = -1
Query: 565 VANQKVKI-PDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLKVEKWFGSK 392
+ N+ +KI P +++ + L+T+KGP G K+L + + N + KV K
Sbjct: 4 IGNRSIKIDPSKVSLMQTTTLLTIKGPLGENTIKLPKNLPLKFVVENDTI-KVTNNNNLK 62
Query: 391 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPIN 278
+ T + V N + GVTKGF+ K+ V + N
Sbjct: 63 QTKILHGTFNALVNNAVIGVTKGFEKKLILVGVGYRAN 100
>UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Lactobacillus
johnsonii
Length = 176
Score = 33.1 bits (72), Expect = 5.8
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAV 374
+++P+ +TV +TVKGP+G L R F D R+ + ++ S+ + A
Sbjct: 9 IEVPEKVTVTKNGDDITVKGPKGELTRYF-----DPRITFEQKDGEIHFSRSSEADKALH 63
Query: 373 RTVCSHVENMIKGVTKGFQYKMRAV 299
T +++ +MI+GVT G+ K+ V
Sbjct: 64 GTERANLASMIEGVTDGYVKKLTLV 88
>UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 180
Score = 33.1 bits (72), Expect = 5.8
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -1
Query: 565 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 389
V VKIP+ + V V +V V+GP+G + L +V + ++ + ++ +K
Sbjct: 4 VGKMPVKIPEKVKVSVDGNVVKVEGPKGKMHFPTNPLVSVQVDKGEVKVARQDESHVAKG 63
Query: 388 ELAAVRTVCSHVENMIKGVTKGFQ 317
RT+ V+N ++GV KG++
Sbjct: 64 LHGLTRTL---VKNALEGVVKGYE 84
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 7.6
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = -1
Query: 469 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 290
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 289 FPINCVTTEGNSIIE 245
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,689,750
Number of Sequences: 1657284
Number of extensions: 12501936
Number of successful extensions: 32009
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 31000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31939
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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