BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_I10 (398 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_58699| Best HMM Match : UCR_14kD (HMM E-Value=3.6e-37) 67 4e-12 SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17) 31 0.35 SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38) 29 1.1 SB_49535| Best HMM Match : RVT_1 (HMM E-Value=5.1e-32) 27 4.3 SB_28421| Best HMM Match : Oxysterol_BP (HMM E-Value=4.5e-11) 27 4.3 SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 27 7.4 SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097) 27 7.4 SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8 >SB_58699| Best HMM Match : UCR_14kD (HMM E-Value=3.6e-37) Length = 116 Score = 67.3 bits (157), Expect = 4e-12 Identities = 33/74 (44%), Positives = 45/74 (60%) Frame = -2 Query: 241 SDSLSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQK 62 S + +W G+ + GL R+D + E DV EA+RR+P + RNFRIVRAI +M+ Sbjct: 19 SAAFREWYIYACGYRQIGLKREDLIIEDSDVAEAVRRIPEEERNLRNFRIVRAIDTTMKM 78 Query: 61 TILPKEEWTKYEED 20 LP+E WTK ED Sbjct: 79 KWLPEELWTKPSED 92 >SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17) Length = 683 Score = 31.1 bits (67), Expect = 0.35 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -2 Query: 187 LLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYE 26 LL + LH+ PD +AL + + + + FRI +A+ S +K I + + Y+ Sbjct: 343 LLAEPALHKDPDTIKALWKATVNELGDLEFRIQQAMTSSSKKPIAEEYSFLVYD 396 >SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38) Length = 1935 Score = 29.5 bits (63), Expect = 1.1 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -2 Query: 178 DDCLHETPDVTEALRRLPS--HVVDERNFRIVRAIQLSMQ-KTILPKEEWTKYEED 20 DDCLH TP EA+R ++ FR+ + + S + + LP+ E T +D Sbjct: 1166 DDCLHSTPTEAEAVRLATDLRELLARGGFRLTKFVSNSKELLSSLPESERTTSVKD 1221 >SB_49535| Best HMM Match : RVT_1 (HMM E-Value=5.1e-32) Length = 991 Score = 27.5 bits (58), Expect = 4.3 Identities = 11/58 (18%), Positives = 28/58 (48%) Frame = -2 Query: 187 LLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYEEDXR 14 ++ +D + P+ T+A++ P H F+ I +++ + +++W Y+ R Sbjct: 510 VISEDGVEADPEKTKAIQDFPDHCDRAPTFQWYATINEPLRQLLKKEQQWLWYQPQER 567 >SB_28421| Best HMM Match : Oxysterol_BP (HMM E-Value=4.5e-11) Length = 378 Score = 27.5 bits (58), Expect = 4.3 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +3 Query: 99 KFLSSTTWDGSLRSASVTSGVSCKQSSRNKP 191 +++ +WD SL +GV+C RN+P Sbjct: 223 RYVIEGSWDKSLECIPQDTGVTCPTDCRNRP 253 >SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) Length = 295 Score = 26.6 bits (56), Expect = 7.4 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +1 Query: 64 FAWRAVWHVQYGSFSRQQHGMEVCGVLQLH 153 F WR V Y S +R QH + CG H Sbjct: 55 FDWRDVNGTNYASTTRNQHIPQYCGSCWAH 84 >SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097) Length = 1623 Score = 26.6 bits (56), Expect = 7.4 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +2 Query: 221 PFAEAVTSVNSRGSESHHGSC 283 PF A+T V+ RG++S G C Sbjct: 1130 PFRRAITCVSRRGNQSPTGGC 1150 >SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1049 Score = 26.2 bits (55), Expect = 9.8 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = -2 Query: 223 WAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKE 44 WA N G Y +++ DVT +L + H E+ F++ ++ +S+ +PK Sbjct: 398 WAQNWDGI--YDMVQPYPDATPLDVTPSL--IKQHYTPEKMFKLAQSFFVSIGLDPMPKS 453 Query: 43 EWTK 32 W K Sbjct: 454 FWNK 457 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,228,470 Number of Sequences: 59808 Number of extensions: 231908 Number of successful extensions: 700 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 700 length of database: 16,821,457 effective HSP length: 75 effective length of database: 12,335,857 effective search space used: 703143849 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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