Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I10
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 299 IDSQIYDFNVILTQTTRNSQYLFST 373
           ID+ + D N  L + TRNS   F T
Sbjct: 543 IDNWMLDLNSGLNKITRNSLDCFFT 567


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 299 IDSQIYDFNVILTQTTRNSQYLFST 373
           ID+ + D N  L + TRNS   F T
Sbjct: 543 IDNWMLDLNSGLNKITRNSLDCFFT 567


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 108 SSTTWDGSLRSASVTSGVSCKQSS 179
           +ST   GSL ++   SGVS  +SS
Sbjct: 233 TSTPGSGSLPASPADSGVSDVESS 256


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 339 KQPEIANTYSQLPSAGRIHL 398
           K  E+AN       AGR+H+
Sbjct: 391 KDVELANKMESSGMAGRVHI 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,260
Number of Sequences: 438
Number of extensions: 2022
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)