Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I05
         (593 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0124 - 938612-940098,940643-940748                               32   0.40 
08_02_0858 + 21943679-21943716,21944009-21944177,21945996-21946025     29   2.8  
10_01_0208 - 2228234-2228254,2228494-2228709,2228796-2228946,222...    29   3.7  
09_04_0489 - 18031187-18031579,18032033-18034030,18034102-180342...    28   4.9  
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115...    28   4.9  
07_01_1129 + 10466943-10467326,10467440-10467574,10467670-104679...    28   6.5  
03_06_0561 + 34728428-34728439,34728529-34728615,34728729-347287...    28   6.5  
07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051     27   8.5  

>07_01_0124 - 938612-940098,940643-940748
          Length = 530

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 189 INMLAKNKYV-YYSFGRFKCGVCDADIEEGENAKRHVLSPK 70
           +N+L K  Y  YY+  RF+C V +AD  +      HV+  K
Sbjct: 90  LNILRKEMYRGYYTLDRFRCHVHEADHTKDHEVSNHVIPSK 130


>08_02_0858 + 21943679-21943716,21944009-21944177,21945996-21946025
          Length = 78

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -3

Query: 501 LKCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANKADIISVYMKGN 352
           ++C  C+  F   RE V H  SN      +A+ K  A KA +  +  KGN
Sbjct: 27  IECPKCHGVFNTRREFVNHKCSNT-RLFMLAQAKKAAKKAVLKQIRNKGN 75


>10_01_0208 -
           2228234-2228254,2228494-2228709,2228796-2228946,
           2229031-2229268,2229394-2229604,2229765-2229943,
           2230041-2230151,2230445-2231240
          Length = 640

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 22/80 (27%), Positives = 39/80 (48%)
 Frame = +1

Query: 340 VQDVISLHVNAYYIRFVRVQLRLRDGALVVHIRKRMFDGLTVIPKIEVAINAFQIFDFIQ 519
           V  V+   +  YY R+ R + R +D   +   R R F G  +I ++E  I+ F +F+F +
Sbjct: 281 VAAVVLCLIVCYYCRWSR-RFR-KDRVRLREKRSRRFRGDELICEMEGEISEFSVFEFRE 338

Query: 520 CRKLFVDFVVHGQTEKFGYG 579
             K   +F    +  + G+G
Sbjct: 339 VIKATDNFSEENKLGEGGFG 358


>09_04_0489 -
           18031187-18031579,18032033-18034030,18034102-18034234,
           18035360-18036108
          Length = 1090

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 498 KCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLN 394
           +C  CN  F+D    V+H LS  +HQ      K+N
Sbjct: 342 ECQKCNLTFQDQSAYVQHQLS--FHQRKAKRRKVN 374


>08_02_1060 +
           24007980-24008662,24010078-24010219,24010293-24011537,
           24012453-24013040
          Length = 885

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
 Frame = -3

Query: 327 SFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTFRYYLELKHNINMLAK-NKYVYYS 151
           S+ C  CN  F+   +   HL+             TF      +  IN + K  + V   
Sbjct: 317 SYECQQCNLTFHGQSAYAHHLI-------------TFHKMGSKRRKINKVGKFGEPVIGK 363

Query: 150 FGRFKCGVCDADIEE--------GENAKRHVLSPKHRENMGATYINEDASAG 19
            G+F+C VC+   EE        G +AK H L+P+      +  +  D+ AG
Sbjct: 364 DGKFECPVCNKTFEEQSRYFGHVGSHAKYHGLTPEAFLQTLSGKVGNDSFAG 415


>07_01_1129 +
           10466943-10467326,10467440-10467574,10467670-10467972,
           10468155-10468247
          Length = 304

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 591 EHMETVAKLLRLXVNNEVDKQFAALNKIEDLKCVYCNFDFRDNR 460
           EH   + KLL   V NE+D    +  K+  + C+   F  R +R
Sbjct: 76  EHAPLLEKLLNFGVRNELDVSIISAPKLVTVGCLCQQFCHRHSR 119


>03_06_0561 +
           34728428-34728439,34728529-34728615,34728729-34728750,
           34728843-34728925,34729139-34729171,34729468-34729546,
           34729642-34729694,34729931-34729991,34730168-34730250,
           34730418-34730513
          Length = 202

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -3

Query: 141 FKCGVCDADIEEGENAKRHVLSPKHRENMGATYINEDASAGRVR 10
           + C VC+  +++  N   H+   KH+  +G +   E AS  +V+
Sbjct: 82  YYCKVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQ 125


>07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051
          Length = 414

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 561 RLXVNNEVDKQFAALNKIEDLKCVYCNFDFRDNR 460
           RL   + +D+++ A  + +DL CV CN + R+ R
Sbjct: 114 RLNTRDMLDRRYCA-KEDDDLTCVLCNANCRETR 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,531,921
Number of Sequences: 37544
Number of extensions: 333250
Number of successful extensions: 888
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)