Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_I05
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 35 0.050
Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 32 0.27
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 32 0.27
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.9
U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 29 1.9
AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of ... 29 1.9
AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of ... 29 1.9
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 29 1.9
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.5
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 2.5
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 29 2.5
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 29 2.5
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 29 3.3
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 29 3.3
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 28 4.4
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 28 4.4
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 28 4.4
Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical pr... 28 5.8
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 28 5.8
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 28 5.8
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 27 7.6
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 27 7.6
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 27 7.6
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 27 7.6
AL132948-34|CAD31836.1| 248|Caenorhabditis elegans Hypothetical... 27 7.6
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = -3
Query: 354 NYILHSEGAS--FTCVNCNGVFNSIRSLLMHLVHAEHFAYRP-PAECTFRYYLELKHNIN 184
NY+ E + C +CN F + +L +H+ H RP E + + +L H
Sbjct: 496 NYVQQQENGKTRYACKDCNKTFGQLSNLKVHV--RTHTGERPFKCEICTKEFTQLAH--- 550
Query: 183 MLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHV 82
L K+ V+ +C +CD N K H+
Sbjct: 551 -LQKHHLVHTGERPHRCDICDKRFSSTSNLKTHL 583
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.050
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = -3
Query: 501 LKCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANKADIISVYMKGNYILHSEGASF 322
L+C++C ++ R NR + H L ++H LN D ++ YI H +
Sbjct: 305 LQCIFCRYNARGNRSKIIHHLYMIHH--------LNLGSPD--NLVFVTEYIEHLKEKLH 354
Query: 321 --TCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTFRYYL 205
C+ C +F +L+ H+ H P ++Y+
Sbjct: 355 RNECIYCEKIFPDRNTLMDHMRKRNHREVNPKNHYYDKFYI 395
>Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical
protein Y6G8.3 protein.
Length = 244
Score = 32.3 bits (70), Expect = 0.27
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = -3
Query: 552 VNNEVDKQFAALNKIEDLK----CVYCNFDFRDNREAVKHA--LSNVYHQSAVAETKLNA 391
+N + K+++ L + DL+ C C F+ N +H L H + + KLNA
Sbjct: 5 LNPVIRKEYSELKR-PDLRGKFICASCGQHFQHNASLNRHRRLLHGNEHTCMMCDRKLNA 63
Query: 390 NKADIISVYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMH 268
+ I +M+ + L FTC CN F+S R L H
Sbjct: 64 KET--IRDHMRNEHNLFQV---FTCGCCNWSFSSKRQLSEH 99
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -3
Query: 345 LHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKHNINMLAKN 169
+H F C C F +L HL +H++ Y P C R+ H + + K+
Sbjct: 147 VHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPY-PCEYCGKRF-----HQKSDMKKH 200
Query: 168 KYVYYSFGRFKCGVCDADIEEGENAKRH 85
Y++ KC VC + N H
Sbjct: 201 TYIHTGEKPHKCTVCGKAFSQSSNLITH 228
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -3
Query: 345 LHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKHNINMLAKN 169
+H F C C F +L HL +H++ Y P C R+ H + + K+
Sbjct: 147 VHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPY-PCEYCGKRF-----HQKSDMKKH 200
Query: 168 KYVYYSFGRFKCGVCDADIEEGENAKRH 85
Y++ KC VC + N H
Sbjct: 201 TYIHTGEKPHKCTVCGKAFSQSSNLITH 228
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 31.9 bits (69), Expect = 0.35
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 147 GRFKCGVCDADIEEGENAKRHVLSPKHRENMGATYINEDASAGRVR 10
G F C VCD +++ N H+ H+ N+G + + ++ VR
Sbjct: 88 GGFYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMKTKKSTVADVR 133
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 31.1 bits (67), Expect = 0.62
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = -3
Query: 369 VYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTF--RYYLELK 196
VY + +H + F C NC F + S+ HL +H +P C + R + +L+
Sbjct: 185 VYQRHIQEVHGDARPFRCFNCGMRFANKTSMTHHL--KDHSLLKPMFSCDYCPRIFSKLE 242
Query: 195 HNINMLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHVLSPKH 67
+K ++ F R C C E+A RH S H
Sbjct: 243 ------SKTRHHKMHFTRSTCQTC-MRFFTTEDALRHHQSTAH 278
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -3
Query: 330 ASFTCVNCNGVFNSIRSLLMH--LVHAE-HFA----YRPPAECTFRYYLELKHNINMLAK 172
A +C +C F S RSL H +H H ++ P T + ++E +HNI ++
Sbjct: 307 ARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIRLVFN 366
Query: 171 NKYVYYSFGRFKC 133
+ +SF +C
Sbjct: 367 CRCCNWSFATRRC 379
>U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical
protein C52E12.6 protein.
Length = 346
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/71 (19%), Positives = 32/71 (45%)
Frame = -3
Query: 564 LRLXVNNEVDKQFAALNKIEDLKCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANK 385
++ N E+++ +K ++L C CN FR +KH + + + L ++K
Sbjct: 212 IKFRFNRELNEHVRLQHKSKELSCCVCNMVFRQLSAKIKH--EKTHEKGSPISNILKSSK 269
Query: 384 ADIISVYMKGN 352
++ ++ N
Sbjct: 270 CSAVNRQVEKN 280
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -3
Query: 330 ASFTCVNCNGVFNSIRSLLMH--LVHAE-HFA----YRPPAECTFRYYLELKHNINMLAK 172
A +C +C F S RSL H +H H ++ P T + ++E +HNI ++
Sbjct: 307 ARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIRLVFN 366
Query: 171 NKYVYYSFGRFKC 133
+ +SF +C
Sbjct: 367 CRCCNWSFATRRC 379
>AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform b protein.
Length = 218
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 363 MKGNYILH-SEGASFTC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 223
MK + + H +G +F C CN FNS SL H V +EH PA+C
Sbjct: 1 MKEHMMTHIKKGNTFECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 50
>AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform c protein.
Length = 175
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 363 MKGNYILH-SEGASFTC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 223
MK + + H +G +F C CN FNS SL H V +EH PA+C
Sbjct: 1 MKEHMMTHIKKGNTFECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 50
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 363 MKGNYILH-SEGASFTC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 223
MK + + H +G +F C CN FNS SL H V +EH PA+C
Sbjct: 45 MKEHMMTHIKKGNTFECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 94
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 418 RRRGDEAEREQSGYNKRLHEGKLHLAQRRSVL 323
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 243 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 274
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 418 RRRGDEAEREQSGYNKRLHEGKLHLAQRRSVL 323
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 243 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 274
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 418 RRRGDEAEREQSGYNKRLHEGKLHLAQRRSVL 323
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 259 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 290
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -3
Query: 345 LHSEGASFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYYLELKHNINMLAKN 169
+H+ F C CN F+ SL+ H H Y P A+C + + + L K+
Sbjct: 187 IHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPY-PCAQCEKAF-----TDSSTLTKH 240
Query: 168 KYVYYSFGRFKCGVCDADIEEGENAKRHVLSPK 70
+ + C +C + N RH+ + K
Sbjct: 241 LRTHTGHKPYVCSICMMKFTQSGNLHRHMKTHK 273
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -3
Query: 345 LHSEGASFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYYLELKHNINMLAKN 169
+H+ F C CN F+ SL+ H H Y P A+C + + + L K+
Sbjct: 128 IHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPY-PCAQCEKAF-----TDSSTLTKH 181
Query: 168 KYVYYSFGRFKCGVCDADIEEGENAKRHVLSPK 70
+ + C +C + N RH+ + K
Sbjct: 182 LRTHTGHKPYVCSICMMKFTQSGNLHRHMKTHK 214
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Frame = -3
Query: 495 CVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANKADIISV-YMKGNYI-----LHSE 334
C C F + KH S +S + +K ++ S + + + + LH+
Sbjct: 334 CTLCGQAFAVHDRLAKHIASRHRQRSCTLDDASKVHKCNMCSKSFSRSDMLTRHMRLHTG 393
Query: 333 GASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPP 232
++C CN VF+ L HL H Y P
Sbjct: 394 AKPYSCPTCNQVFSRSDHLSTHLRTHTGEKPYACP 428
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 141 FKCGVCDADIEEGENAKRHVLSPKHRENMGATYINEDASAG 19
F C +CDA ++E E +H L H++ +G + +D S G
Sbjct: 713 FVCEICDASVQEKEKYLQH-LQTTHKQMVGK--VLQDMSQG 750
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 141 FKCGVCDADIEEGENAKRHVLSPKHRENMGATYINEDASAG 19
F C +CDA ++E E +H L H++ +G + +D S G
Sbjct: 713 FVCEICDASVQEKEKYLQH-LQTTHKQMVGK--VLQDMSQG 750
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = -3
Query: 498 KCVYCNFDFRDNREAVKHALSNVYHQSAVAET-KLNANKADIISVYMKGNYILHSEGASF 322
+C C F + +H +++ +S T + + D + ++ N++ E + F
Sbjct: 64 RCENCEKQFTNKPNLKRHQITHSGSKSKKCSTCQRTFFREDQLQRHLH-NHL--KERSHF 120
Query: 321 TC--VNCNGVFNSIRSLLMHLVHAEHFAYRPPAEC 223
C +NC+ F + HLV+ HF+Y A C
Sbjct: 121 DCPVLNCSMQFVFYEGVENHLVNHHHFSYSESAPC 155
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = -3
Query: 495 CVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANKADIISVYMKGNYILHSEGASFTC 316
CV C+ F N EA++ V+ S + KA + + LH + C
Sbjct: 30 CVMCSKAF-PNAEALQIHTDQVHDLSRLKHRCKLCGKAYKRKKNLDAHMALHLK--EIQC 86
Query: 315 VNCNGVFNSIRSLLMHLV 262
NC+ VF S +SL H++
Sbjct: 87 DNCSLVFQSEKSLQSHII 104
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = -3
Query: 495 CVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANKADIISVYMKGNYILHSEGASFTC 316
CV C+ F N EA++ V+ S + KA + + LH + C
Sbjct: 148 CVMCSKAF-PNAEALQIHTDQVHDLSRLKHRCKLCGKAYKRKKNLDAHMALHLK--EIQC 204
Query: 315 VNCNGVFNSIRSLLMHLV 262
NC+ VF S +SL H++
Sbjct: 205 DNCSLVFQSEKSLQSHII 222
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = -2
Query: 340 QRRSVLYVRQLQWRIQFDSVAFD----AFSA-RRALCLQTAGGVHLPLLSRIKTQH*YAG 176
QR+ L ++Q+ WR+ DS++FD + SA RR + TA + + S +H
Sbjct: 431 QRKEHL-IQQMPWRVPLDSISFDDNGGSLSASRRVSTISTARASYSSIFSGNVAEHAIVN 489
Query: 175 EKQI 164
++++
Sbjct: 490 KQKV 493
>Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical
protein F47H4.1 protein.
Length = 250
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 495 CVYCNFDFRDNREAVKHA--LSNVYHQSAVAETKLNANKADIISVYMKGNYILHSEGASF 322
C C+ +F+ + +H + + H + E LN + + I +M+ H+ F
Sbjct: 27 CSSCSQNFQHSASLNRHRQLMHSNEHTCMMCERALN--QKETIREHMRNE---HNLAQVF 81
Query: 321 TCVNCNGVFNSIRSLLMH 268
TC CN F S R L H
Sbjct: 82 TCGCCNWTFASKRQLTEH 99
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 421 ERRRGDEAEREQSGYNKRL--HEGK-LHLAQRRSVLYVRQLQWRIQFDSVA 278
E + G +E E+S Y +++ HE K L Q+R R+LQW+ QF + +
Sbjct: 414 ELKDGAFSEIEKSEYGEKVIRHEAKKLSREQKRLERKQRKLQWKRQFTTAS 464
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 421 ERRRGDEAEREQSGYNKRL--HEGK-LHLAQRRSVLYVRQLQWRIQFDSVA 278
E + G +E E+S Y +++ HE K L Q+R R+LQW+ QF + +
Sbjct: 414 ELKDGAFSEIEKSEYGEKVIRHEAKKLSREQKRLERKQRKLQWKRQFTTAS 464
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 546 NEVDKQFAALNKIEDLKCVYCNFDFRDNREAVKHALS--NVYHQSAVAE 406
+E+ + + LN+ ++++C+YC + N + K N YHQ + +
Sbjct: 353 SEIWEHYKCLNEKQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQDILRD 401
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/85 (16%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -3
Query: 510 IEDLKCVYCNFDFRDNREAVKHALSNVY----HQSAVAETKLNANKADIISVYMKGNYIL 343
++ +C +C F + +H+++++ V++ + ++ + + +++ + +
Sbjct: 158 VKPYECRFCKKRFFRKDQMQEHSMTHIKTGFGFDCPVSQCNMQFSQHNALRAHLEETHTI 217
Query: 342 HSEGASFTCVNCNGVFNSIRSLLMH 268
S + +C CN +F + R LL+H
Sbjct: 218 SSTNPA-SCKRCNLMFANSRRLLLH 241
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/85 (16%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -3
Query: 510 IEDLKCVYCNFDFRDNREAVKHALSNVY----HQSAVAETKLNANKADIISVYMKGNYIL 343
++ +C +C F + +H+++++ V++ + ++ + + +++ + +
Sbjct: 158 VKPYECRFCKKRFFRKDQMQEHSMTHIKTGFGFDCPVSQCNMQFSQHNALRAHLEETHTI 217
Query: 342 HSEGASFTCVNCNGVFNSIRSLLMH 268
S + +C CN +F + R LL+H
Sbjct: 218 SSTNPA-SCKRCNLMFANSRRLLLH 241
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Frame = -3
Query: 498 KCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANKADII--------SVYMKGNYIL 343
KC YC F + +H + N++++ + T N ++ + + + +L
Sbjct: 252 KCQYCERSFSISSNLQRH-VRNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTTVHHPLL 310
Query: 342 HSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFA 244
H G SF C C F +L HL E A
Sbjct: 311 HLPGTSFRCQKCERCFGQQTNLDRHLKKHEQAA 343
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Frame = -3
Query: 498 KCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANKADII--------SVYMKGNYIL 343
KC YC F + +H + N++++ + T N ++ + + + +L
Sbjct: 473 KCQYCERSFSISSNLQRH-VRNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTTVHHPLL 531
Query: 342 HSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFA 244
H G SF C C F +L HL E A
Sbjct: 532 HLPGTSFRCQKCERCFGQQTNLDRHLKKHEQAA 564
>AL132948-34|CAD31836.1| 248|Caenorhabditis elegans Hypothetical
protein Y39B6A.46 protein.
Length = 248
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 339 SEGASFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPP 232
S+ C C FN+ + L H AEH A RPP
Sbjct: 107 SQPRELYCFTCGDAFNNRKGLYRHGKTAEH-ATRPP 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,764,688
Number of Sequences: 27780
Number of extensions: 283675
Number of successful extensions: 1073
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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