Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_I04
(345 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL591024-1|CAH70632.1| 51|Homo sapiens protein ( Human DNA seq... 51 1e-06
BT007293-1|AAP35957.1| 51|Homo sapiens ATP synthase, H+ transp... 50 2e-06
BC105811-1|AAI05812.1| 51|Homo sapiens ATP5E protein protein. 50 2e-06
BC003671-1|AAH03671.1| 51|Homo sapiens ATP synthase, H+ transp... 50 2e-06
BC001690-1|AAH01690.1| 51|Homo sapiens ATP synthase, H+ transp... 50 2e-06
AL109840-12|CAC09372.1| 51|Homo sapiens ATP synthase, H+ trans... 50 2e-06
AF052955-1|AAF72736.1| 51|Homo sapiens F1-ATPase epsilon-subun... 50 2e-06
L24158-1|AAA16099.1| 1000|Homo sapiens integrin alpha 9 protein ... 29 5.2
D25303-1|BAA04984.1| 1035|Homo sapiens integrin alpha subunit pr... 29 5.2
AF502591-1|AAQ07460.1| 982|Homo sapiens BRCC1 protein. 29 5.2
>AL591024-1|CAH70632.1| 51|Homo sapiens protein ( Human DNA
sequence from clone RP11-153M24 on chromosome 13
Contains a novel gene similar to ATP synthase (H+
transporting, mitochondrialnase, an).
Length = 51
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -1
Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRV 109
WRQAGL+YI YS I AKV+R +LK EF+A A K V++
Sbjct: 5 WRQAGLSYIRYSQICAKVVRDALKTEFKANAKKTSGNSVKI 45
>BT007293-1|AAP35957.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRV 109
WRQAGL+YI YS I AK +R +LK EF+A A K +V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC105811-1|AAI05812.1| 51|Homo sapiens ATP5E protein protein.
Length = 51
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRV 109
WRQAGL+YI YS I AK +R +LK EF+A A K +V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC003671-1|AAH03671.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRV 109
WRQAGL+YI YS I AK +R +LK EF+A A K +V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC001690-1|AAH01690.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRV 109
WRQAGL+YI YS I AK +R +LK EF+A A K +V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>AL109840-12|CAC09372.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRV 109
WRQAGL+YI YS I AK +R +LK EF+A A K +V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>AF052955-1|AAF72736.1| 51|Homo sapiens F1-ATPase epsilon-subunit
protein.
Length = 51
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRV 109
WRQAGL+YI YS I AK +R +LK EF+A A K +V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>L24158-1|AAA16099.1| 1000|Homo sapiens integrin alpha 9 protein
protein.
Length = 1000
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 162 LVTCEAPWLRCLSSLCKLNQLASKRSFC*CSYLLLFSKI 278
++ CE P + CL++ C + LA + S Y+LL ++I
Sbjct: 853 VLDCEKPGISCLTAHCNFSALAKEESRTIDIYMLLNTEI 891
>D25303-1|BAA04984.1| 1035|Homo sapiens integrin alpha subunit
protein.
Length = 1035
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 162 LVTCEAPWLRCLSSLCKLNQLASKRSFC*CSYLLLFSKI 278
++ CE P + CL++ C + LA + S Y+LL ++I
Sbjct: 888 VLDCEKPGISCLTAHCNFSALAKEESRTIDIYMLLNTEI 926
>AF502591-1|AAQ07460.1| 982|Homo sapiens BRCC1 protein.
Length = 982
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 196 KHRSQGASQVTKARISSRGVET*RXSRQSHTLGQ-RTTCTPPESC 65
K+ S G + V + +SSR S Q+ Q T C+P ESC
Sbjct: 585 KNNSDGKTAVVGSNLSSRPASPNSSSGQASVGNQTNTACSPEESC 629
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,341,529
Number of Sequences: 237096
Number of extensions: 809487
Number of successful extensions: 1749
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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