Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I04
         (345 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   5.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   9.5  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 321 FTLLSGCGIQENFNLFLRIKVNKNINKMSAWRQAGLTY 208
           FT+ +G G+ E+  + L+ +VN  +  +      GLTY
Sbjct: 42  FTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLTY 79


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 267 IKVNKNINKMSAWRQAGLTY 208
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 267 IKVNKNINKMSAWRQAGLTY 208
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 267 IKVNKNINKMSAWRQAGLTY 208
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 324 YFTLLSGCGIQENFNLFLR 268
           YFT    CGI   F+  L+
Sbjct: 332 YFTFTRPCGITLTFHEILK 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,359
Number of Sequences: 438
Number of extensions: 1340
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)