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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I04
         (345 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g51650.1 68414.m05819 ATP synthase epsilon chain, mitochondri...    64   2e-11
At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transfera...    29   1.1  
At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transfera...    29   1.1  
At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein si...    27   2.5  
At3g26920.1 68416.m03368 F-box family protein contains F-box dom...    27   2.5  
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote...    27   3.4  
At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc ...    27   3.4  
At3g14710.1 68416.m01860 F-box family protein   ; similar to SKP...    27   3.4  
At2g44440.1 68415.m05526 emsy N terminus domain-containing prote...    26   5.9  
At5g16110.1 68418.m01882 expressed protein hypothetical protein ...    26   7.7  
At5g15500.2 68418.m01815 ankyrin repeat family protein contains ...    26   7.7  
At5g15500.1 68418.m01814 ankyrin repeat family protein contains ...    26   7.7  
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ...    26   7.7  

>At1g51650.1 68414.m05819 ATP synthase epsilon chain, mitochondrial
           identical to ATP synthase epsilon chain, mitochondrial
           SP:Q96253 from [Arabidopsis thaliana]
          Length = 70

 Score = 64.1 bits (149), Expect = 2e-11
 Identities = 25/49 (51%), Positives = 37/49 (75%)
 Frame = -1

Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRVTPWANGRP 85
           WR AG+TYI+YSNI A ++R  LK+  +AEAL R++ H  ++ WA+G+P
Sbjct: 10  WRAAGMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKP 58


>At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein glycosyltransferase family
          Length = 479

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +3

Query: 36  LVHSSF-FTLEQLSGGVQVVRWP 101
           L HS +  TLE LSGGV +V WP
Sbjct: 373 LTHSGWNSTLESLSGGVPMVCWP 395


>At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein glycosyltransferase family
          Length = 309

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +3

Query: 36  LVHSSF-FTLEQLSGGVQVVRWP 101
           L HS +  TLE LSGGV +V WP
Sbjct: 203 LTHSGWNSTLESLSGGVPMVCWP 225


>At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein
           similar to alpha-mannosidase II SP:P27046 from [Mus
           musculus]
          Length = 1173

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 85  CTPPESCSKVKKEE*TNMHEXHQLLIY 5
           C PP SCSK+  +  T +   HQ L++
Sbjct: 743 CPPPYSCSKLDNDV-TEIRNEHQTLVF 768


>At3g26920.1 68416.m03368 F-box family protein contains F-box
          domain Pfam:PF00646
          Length = 565

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 1  LHKLIVDXFHACWFTLPSSLWNS 69
          L KL++  +   WF  P+SL+NS
Sbjct: 24 LRKLVLKVYSGDWFKFPTSLYNS 46


>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 654

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 61  WNSFLEVCRSSVGPRCDSDVXFVTFQRL 144
           WNS   +C+S VG  C SD   V   RL
Sbjct: 67  WNSTNHICKSWVGVTCTSDGTSVHALRL 94


>At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc
           finger domain-containing protein-related contains Pfam
           profiles PF03468: XS domain, weak hit to PF03470: XS
           zinc finger domain
          Length = 625

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 244 QNERLEASWFNLHKLLKH-RSQGASQV 167
           QN      W+NLH LL H R++GA +V
Sbjct: 232 QNGPGAIDWYNLHPLLAHARTKGARRV 258


>At3g14710.1 68416.m01860 F-box family protein   ; similar to SKP1
           interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
          Length = 442

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 132 VSTPLLEILALVTCEAPWLRCLSSLCKLNQLASK 233
           + +PLL I  +  C +  +   S +CK+  LASK
Sbjct: 219 IDSPLLRIFEMFKCTSEHVPNPSQVCKIRVLASK 252


>At2g44440.1 68415.m05526 emsy N terminus domain-containing protein
           / ENT domain-containing protein contains Pfam profile
           PF03735: ENT domain
          Length = 429

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = -1

Query: 294 QENFNLFLRIKVNKNINKMSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXH- 118
           +E+  L  R+  +  I ++  WRQ+G    +  N AA+V+  +L     + ++K  + + 
Sbjct: 103 EEHRELLGRVNSDDTIRRIREWRQSGGMQPSMRN-AAQVVHDTLPSPSVSASMKTHKPNQ 161

Query: 117 -VRVTPWANGRPAHLQKAVP 61
            +   P+A+  P+   +A P
Sbjct: 162 PIPSQPFASSSPSFHPQADP 181


>At5g16110.1 68418.m01882 expressed protein hypothetical protein
           T26J14.6 - Arabidopsis thaliana, EMBL:AC011915
          Length = 244

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 211 LHKLLKHRSQGASQVTKARISSRGVET*RXSRQSHTLGQRTTCTPP 74
           +  L  H SQ A+ +  ++  +  +E  R    + T+GQ  + +PP
Sbjct: 108 IRPLRLHMSQAAADLCDSKAGAELLEIIRRKEDNGTIGQLLSSSPP 153


>At5g15500.2 68418.m01815 ankyrin repeat family protein contains
           Pfam domain, PF00023: Ankyrin repeat
          Length = 457

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 325 IFHFTLWLWNSGKFQFIFE 269
           ++   LWLWNS  F F  E
Sbjct: 338 VYFIWLWLWNSAGFCFAIE 356


>At5g15500.1 68418.m01814 ankyrin repeat family protein contains
           Pfam domain, PF00023: Ankyrin repeat
          Length = 351

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 325 IFHFTLWLWNSGKFQFIFE 269
           ++   LWLWNS  F F  E
Sbjct: 232 VYFIWLWLWNSAGFCFAIE 250


>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 580

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 112 SHTLGQRTTCTPPESCSKVKKEE 44
           SHTL +R    PP  C    KEE
Sbjct: 18  SHTLSRRAGRIPPSGCFACDKEE 40


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,870,887
Number of Sequences: 28952
Number of extensions: 114083
Number of successful extensions: 301
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 419412672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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