BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_I04 (345 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g51650.1 68414.m05819 ATP synthase epsilon chain, mitochondri... 64 2e-11 At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.1 At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.1 At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein si... 27 2.5 At3g26920.1 68416.m03368 F-box family protein contains F-box dom... 27 2.5 At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 27 3.4 At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc ... 27 3.4 At3g14710.1 68416.m01860 F-box family protein ; similar to SKP... 27 3.4 At2g44440.1 68415.m05526 emsy N terminus domain-containing prote... 26 5.9 At5g16110.1 68418.m01882 expressed protein hypothetical protein ... 26 7.7 At5g15500.2 68418.m01815 ankyrin repeat family protein contains ... 26 7.7 At5g15500.1 68418.m01814 ankyrin repeat family protein contains ... 26 7.7 At2g17600.1 68415.m02036 DC1 domain-containing protein contains ... 26 7.7 >At1g51650.1 68414.m05819 ATP synthase epsilon chain, mitochondrial identical to ATP synthase epsilon chain, mitochondrial SP:Q96253 from [Arabidopsis thaliana] Length = 70 Score = 64.1 bits (149), Expect = 2e-11 Identities = 25/49 (51%), Positives = 37/49 (75%) Frame = -1 Query: 231 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXHVRVTPWANGRP 85 WR AG+TYI+YSNI A ++R LK+ +AEAL R++ H ++ WA+G+P Sbjct: 10 WRAAGMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKP 58 >At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transferase family protein glycosyltransferase family Length = 479 Score = 28.7 bits (61), Expect = 1.1 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +3 Query: 36 LVHSSF-FTLEQLSGGVQVVRWP 101 L HS + TLE LSGGV +V WP Sbjct: 373 LTHSGWNSTLESLSGGVPMVCWP 395 >At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transferase family protein glycosyltransferase family Length = 309 Score = 28.7 bits (61), Expect = 1.1 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +3 Query: 36 LVHSSF-FTLEQLSGGVQVVRWP 101 L HS + TLE LSGGV +V WP Sbjct: 203 LTHSGWNSTLESLSGGVPMVCWP 225 >At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein similar to alpha-mannosidase II SP:P27046 from [Mus musculus] Length = 1173 Score = 27.5 bits (58), Expect = 2.5 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 Query: 85 CTPPESCSKVKKEE*TNMHEXHQLLIY 5 C PP SCSK+ + T + HQ L++ Sbjct: 743 CPPPYSCSKLDNDV-TEIRNEHQTLVF 768 >At3g26920.1 68416.m03368 F-box family protein contains F-box domain Pfam:PF00646 Length = 565 Score = 27.5 bits (58), Expect = 2.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 1 LHKLIVDXFHACWFTLPSSLWNS 69 L KL++ + WF P+SL+NS Sbjct: 24 LRKLVLKVYSGDWFKFPTSLYNS 46 >At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein kinase, putative Length = 654 Score = 27.1 bits (57), Expect = 3.4 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +1 Query: 61 WNSFLEVCRSSVGPRCDSDVXFVTFQRL 144 WNS +C+S VG C SD V RL Sbjct: 67 WNSTNHICKSWVGVTCTSDGTSVHALRL 94 >At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc finger domain-containing protein-related contains Pfam profiles PF03468: XS domain, weak hit to PF03470: XS zinc finger domain Length = 625 Score = 27.1 bits (57), Expect = 3.4 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = -3 Query: 244 QNERLEASWFNLHKLLKH-RSQGASQV 167 QN W+NLH LL H R++GA +V Sbjct: 232 QNGPGAIDWYNLHPLLAHARTKGARRV 258 >At3g14710.1 68416.m01860 F-box family protein ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 Length = 442 Score = 27.1 bits (57), Expect = 3.4 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +3 Query: 132 VSTPLLEILALVTCEAPWLRCLSSLCKLNQLASK 233 + +PLL I + C + + S +CK+ LASK Sbjct: 219 IDSPLLRIFEMFKCTSEHVPNPSQVCKIRVLASK 252 >At2g44440.1 68415.m05526 emsy N terminus domain-containing protein / ENT domain-containing protein contains Pfam profile PF03735: ENT domain Length = 429 Score = 26.2 bits (55), Expect = 5.9 Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = -1 Query: 294 QENFNLFLRIKVNKNINKMSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDEXH- 118 +E+ L R+ + I ++ WRQ+G + N AA+V+ +L + ++K + + Sbjct: 103 EEHRELLGRVNSDDTIRRIREWRQSGGMQPSMRN-AAQVVHDTLPSPSVSASMKTHKPNQ 161 Query: 117 -VRVTPWANGRPAHLQKAVP 61 + P+A+ P+ +A P Sbjct: 162 PIPSQPFASSSPSFHPQADP 181 >At5g16110.1 68418.m01882 expressed protein hypothetical protein T26J14.6 - Arabidopsis thaliana, EMBL:AC011915 Length = 244 Score = 25.8 bits (54), Expect = 7.7 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -3 Query: 211 LHKLLKHRSQGASQVTKARISSRGVET*RXSRQSHTLGQRTTCTPP 74 + L H SQ A+ + ++ + +E R + T+GQ + +PP Sbjct: 108 IRPLRLHMSQAAADLCDSKAGAELLEIIRRKEDNGTIGQLLSSSPP 153 >At5g15500.2 68418.m01815 ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat Length = 457 Score = 25.8 bits (54), Expect = 7.7 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 Query: 325 IFHFTLWLWNSGKFQFIFE 269 ++ LWLWNS F F E Sbjct: 338 VYFIWLWLWNSAGFCFAIE 356 >At5g15500.1 68418.m01814 ankyrin repeat family protein contains Pfam domain, PF00023: Ankyrin repeat Length = 351 Score = 25.8 bits (54), Expect = 7.7 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 Query: 325 IFHFTLWLWNSGKFQFIFE 269 ++ LWLWNS F F E Sbjct: 232 VYFIWLWLWNSAGFCFAIE 250 >At2g17600.1 68415.m02036 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 580 Score = 25.8 bits (54), Expect = 7.7 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -3 Query: 112 SHTLGQRTTCTPPESCSKVKKEE 44 SHTL +R PP C KEE Sbjct: 18 SHTLSRRAGRIPPSGCFACDKEE 40 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,870,887 Number of Sequences: 28952 Number of extensions: 114083 Number of successful extensions: 301 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 301 length of database: 12,070,560 effective HSP length: 72 effective length of database: 9,986,016 effective search space used: 419412672 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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