Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I02
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.41 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.54 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   0.94 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.7  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 327 CPLPSKVYGCSPKCKEDYECTHGK 256
           C L SKV G    C   +EC +G+
Sbjct: 29  CKLKSKVVGDETYCDRYWECVNGQ 52


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 342 EAAGTCPLPSKVYGCSPKCKEDYECTHGKV 253
           EA   CP     +  + +C + YEC  G++
Sbjct: 34  EATDQCPEKYGFFADAEQCDKYYECNDGQI 63


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 414 FVHRT--QHFNCSMQTEPH*VIQFNMIIRSQHR 506
           F+HRT   +F CS    PH V  F ++I+  ++
Sbjct: 337 FIHRTVDDYFFCS--PHPHKVYDFELLIKGVYQ 367


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 6   KFIYKVNKHXNYIMKSDLSLFKLCCISFSSL 98
           K + K NK+ N+I+   LS+F +  + ++SL
Sbjct: 313 KTVLKTNKYCNFIILFYLSVF-VILVYYASL 342


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 509 RPMLRSYDHIKLNHSV 462
           RP L+SY +IKL  SV
Sbjct: 45  RPYLKSYTYIKLVVSV 60


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 396 SMTFLLGVFALVTFVFYAEAAGTCPLPSKVYG 301
           +M+ +L +  ++T+ F+A  AG     S +YG
Sbjct: 189 AMSNVLDIINVMTYDFHAMWAGFTAENSPLYG 220


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 288 CKEDYECTHGK 256
           C + Y C HGK
Sbjct: 488 CDKYYRCVHGK 498


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 219 NTTWRC 236
           NTTWRC
Sbjct: 158 NTTWRC 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,415
Number of Sequences: 336
Number of extensions: 2372
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)