Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_I02
         (523 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41548-4|AAA83203.1|  322|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81550-1|CAB04480.1|  269|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL117202-12|CAB55074.1|  274|Caenorhabditis elegans Hypothetical...    27   6.2  
AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF045646-3|AAK29836.2|  432|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U41548-4|AAA83203.1|  322|Caenorhabditis elegans Hypothetical
           protein M02F4.7 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 384 LLGVFALVTFVFYAEAAGTCPLPSKVYGCSPKC 286
           L+ V +L+  VFY   A TCP  +K+Y  + KC
Sbjct: 5   LIFVISLIASVFYCTNALTCPTGTKIY--NAKC 35


>Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical
           protein W07G1.5a protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -3

Query: 233 TPSRVQSRLLTAEAPGALANTQP 165
           TP  V SR  TA+APG  AN QP
Sbjct: 319 TPPVVASRPATAKAPGTPANRQP 341


>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
            F30H5.3 protein.
          Length = 1599

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -2

Query: 210  AAYGGGTGSSSKHATGGTGVYCENVKCNSYEI---CKRDPITKRMKC 79
            AA G  TGS+    + GT V C N   NS      C++  ++ R +C
Sbjct: 1463 AANGCATGSALLFPSTGTPVQCSNSGSNSCPAGYKCQKSTLSNRFQC 1509


>Z81550-1|CAB04480.1|  269|Caenorhabditis elegans Hypothetical
           protein F55F3.1 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 488 DHIKLNHSVRLSLHRAVEVLCSVNKKKTKWV 396
           DH+ LNH   LS+   V VL + ++ + K+V
Sbjct: 231 DHVMLNHLYALSIKDGVMVLSATHRYRKKFV 261


>U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical
           protein R05G6.2 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 218 EHDLALHELEQQTLPCVHS*SSLHLGLQPYTFEGRGHVPAASA*KTKVTNAN 373
           E  L+L E+E++ L C HS  + HLG   +T +    VP   +   K+T  N
Sbjct: 84  EPRLSLREMEEK-LECCHSTIARHLGRLGFTSKLGTWVPHELSASQKLTRVN 134


>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical protein
            K10B2.5 protein.
          Length = 1009

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = -3

Query: 338  PLARALFLRKCTVAALNARRTTNVHTARFAVLIRATPSRVQSR--LLTAEAPGALAN 174
            PL++ + L KCT  ++   R    H     +LI  TPS ++ R  +L AE+   LA+
Sbjct: 940  PLSQ-IDLTKCTNQSVEETRNGRDHEFHIELLIDQTPSLLEKRRVVLAAESSDHLAS 995


>AL117202-12|CAB55074.1|  274|Caenorhabditis elegans Hypothetical
           protein Y47D3A.15 protein.
          Length = 274

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 488 DHIKLNHSVRLSLHRAVEVLCSVNKKKTKWV 396
           +H+ LNH   LS+  +V VL S  + + K+V
Sbjct: 236 NHVMLNHMYALSIKDSVMVLSSTQRYRKKFV 266


>AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical
           protein Y49F6A.4 protein.
          Length = 514

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 218 EHDLALHELEQQTLPCVHS*SSLHLGLQPYTFEGRGHVPAASA*KTKVTNAN 373
           E  L+L E+E++ L C HS  + HLG   +T +    VP   +   K+T  N
Sbjct: 59  EPRLSLREMEEK-LECCHSTIARHLGRLGFTSKLGTWVPHELSASQKLTRVN 109


>AF045646-3|AAK29836.2|  432|Caenorhabditis elegans Hypothetical
           protein F56B3.2a protein.
          Length = 432

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -2

Query: 324 PLPSKVYG-CSPKCKEDYECTHGK 256
           PLP+K+   CS KC+E   C +G+
Sbjct: 77  PLPAKIGARCSSKCREPLFCRNGE 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,183,253
Number of Sequences: 27780
Number of extensions: 218461
Number of successful extensions: 668
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)