Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H23
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   3.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.8  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 451 SGGWDGHIRIFSWFSMRPLV 392
           + GW    R+F+ F  +PL+
Sbjct: 310 TAGWSATSRVFATFYNKPLI 329



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 349 STEKVSLWKAYIMAAGGLDGAI 284
           ST+ +S W   ++A  G+D +I
Sbjct: 262 STQSLSRWIKMVLAESGVDTSI 283


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +2

Query: 83  HNIMPLHKFVHNMRSKFIMLSKNII 157
           H+++P+ +F  ++   F  + KN+I
Sbjct: 166 HSVLPIKRFFTSLGIAFDNIMKNLI 190


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FCLN*IFVSHLKHCL*FLF 600
           FC   IF  HL  C  F+F
Sbjct: 170 FCAFIIFTMHLLFCCAFIF 188


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 413 P*KYTNVSIPASAREYFTITP 475
           P KY +  + A ARE  T+ P
Sbjct: 150 PDKYVDSKVFAKAREEATVVP 170


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 298 DLQLPLYKLSKVKLF 342
           D+  P +KLSK++ F
Sbjct: 30  DINTPSFKLSKIRSF 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,694
Number of Sequences: 336
Number of extensions: 3122
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)