BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_H23 (651 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 52 7e-08 SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 40 3e-04 SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 39 5e-04 SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 38 0.001 SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 38 0.001 SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 38 0.001 SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 37 0.003 SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 37 0.003 SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.007 SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 31 0.11 SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 31 0.11 SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 31 0.11 SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 31 0.19 SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 31 0.19 SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 30 0.25 SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 30 0.33 SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 0.44 SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 29 0.44 SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 29 0.77 SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 0.77 SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 28 1.3 SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 28 1.3 SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 27 1.8 SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 27 1.8 SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 27 1.8 SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 2.3 SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 27 2.3 SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 3.1 SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 27 3.1 SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 25 7.2 SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1 |Sch... 25 7.2 SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 25 7.2 SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 25 9.5 SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 9.5 SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 25 9.5 >SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosaccharomyces pombe|chr 1|||Manual Length = 368 Score = 52.0 bits (119), Expect = 7e-08 Identities = 26/80 (32%), Positives = 41/80 (51%) Frame = -3 Query: 505 KNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLW 326 K+ G ++ RSD K+ + GWDG R++S ++ PL VL H I +A+ Sbjct: 295 KHCGQQNIRIRSDNKILATAGWDGRGRVYSCQTLAPLAVLKYHSDGINSLAFHP------ 348 Query: 325 KAYIMAAGGLDGAITLWDLY 266 + ++A D I+LW LY Sbjct: 349 GSNVIALASKDTRISLWKLY 368 >SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 535 Score = 39.9 bits (89), Expect = 3e-04 Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%) Frame = -3 Query: 610 LEQQRGIIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKV---KTRSDGKVFTSGGW 440 LE R ++G + I ++++ + + L TI N +V DG F SGG Sbjct: 283 LETNRLLVGKGNGNIFVYDIIWSESTSKAVLVATITNAHDEQVCGLTWNHDGSQFASGGN 342 Query: 439 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNS 260 D + +F +R + + + A++ +++ + SL AG D I ++ +N Sbjct: 343 DNRVCLFKGSDLRQPLYVWQQNAAVKALSFCPWQRSL---LATGAGSHDKHIRFYNCFNG 399 Query: 259 KQ*NDQIMLYCDLQVMICH 203 K+ ++ LYC Q+ H Sbjct: 400 KKIDE---LYCGAQITSIH 415 >SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 462 Score = 39.1 bits (87), Expect = 5e-04 Identities = 24/76 (31%), Positives = 38/76 (50%) Frame = -3 Query: 496 GINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAY 317 GI + + DG + +SGG D RI+ S + ++VL EH + I +A+S Y Sbjct: 309 GIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSP------NGY 362 Query: 316 IMAAGGLDGAITLWDL 269 +A D + +WDL Sbjct: 363 QLATSSADDTVKIWDL 378 Score = 25.0 bits (52), Expect = 9.5 Identities = 15/69 (21%), Positives = 28/69 (40%) Frame = -3 Query: 469 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 290 +G + D ++I+ + + H + DV Y V+ + +A G DG Sbjct: 360 NGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRF----IATSGYDG 415 Query: 289 AITLWDLYN 263 + LW+ N Sbjct: 416 CVKLWNPLN 424 >SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizosaccharomyces pombe|chr 1|||Manual Length = 506 Score = 38.3 bits (85), Expect = 0.001 Identities = 23/72 (31%), Positives = 36/72 (50%) Frame = -3 Query: 469 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 290 +GK SG D IRIF S + L +L H+ I+ V ++ EK+ +GG DG Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKI--------VSGGYDG 449 Query: 289 AITLWDLYNSKQ 254 + +W+ +Q Sbjct: 450 TVRIWNFNTGEQ 461 >SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 543 Score = 37.9 bits (84), Expect = 0.001 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = -3 Query: 496 GINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTE-HKQAIQDVAYSTEKVSLWKA 320 G+ V DGK GG D + I+S F +R LV + HK + DV + + Sbjct: 366 GLTCVTWSPDGKFIAIGGKDDLVSIYS-FPLRKLVARCQGHKSWVTDVIFDAWRCD-DDN 423 Query: 319 YIMAAGGLDGAITLWD 272 Y +A+ GLD + LWD Sbjct: 424 YRIASVGLDRKLLLWD 439 >SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 854 Score = 37.9 bits (84), Expect = 0.001 Identities = 19/75 (25%), Positives = 39/75 (52%) Frame = -3 Query: 493 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 314 ++ ++ SDG+ +G DG I+++ S +V T+H A+ + +S + + Sbjct: 342 LSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSK------RGNV 395 Query: 313 MAAGGLDGAITLWDL 269 + + LDG++ WDL Sbjct: 396 LFSSSLDGSVRAWDL 410 Score = 34.3 bits (75), Expect = 0.015 Identities = 19/80 (23%), Positives = 34/80 (42%) Frame = -3 Query: 493 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 314 ++ + S G + SG WD +RI+ FS +V + +A+ + Sbjct: 470 VSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDGKE------ 523 Query: 313 MAAGGLDGAITLWDLYNSKQ 254 + LDG +T W++ KQ Sbjct: 524 VCVASLDGQLTFWNVQEGKQ 543 >SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr 2|||Manual Length = 1207 Score = 36.7 bits (81), Expect = 0.003 Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Frame = -3 Query: 439 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNS 260 D IRI++W S + +LT H + A+ + ++ + LD + +WD+ Sbjct: 116 DQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSE------DLIVSASLDQTVRVWDISGL 169 Query: 259 KQ*N-DQIMLYCDLQVMICHSLCQFCLYTSTNALIDYIFRQH 137 + N + + + Q+ H+ L+ ST+A++ ++ H Sbjct: 170 RMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGH 211 >SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 488 Score = 36.7 bits (81), Expect = 0.003 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -3 Query: 475 RSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGG- 299 RSDG SGG D ++I+ S P T H A++ VA+ W++ ++A GG Sbjct: 313 RSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCP-----WQSNLLATGGG 367 Query: 298 -LDGAITLWD 272 +D I W+ Sbjct: 368 TMDKQIHFWN 377 >SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosaccharomyces pombe|chr 1|||Manual Length = 586 Score = 35.5 bits (78), Expect = 0.007 Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 3/106 (2%) Frame = -3 Query: 562 IFNLGRKDLSLTLKLDVTIKNPG---INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLV 392 +FN+ L +TL + + K G + V DGK +G D IRI+ R Sbjct: 312 VFNVETGKL-ITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYR 370 Query: 391 VLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSKQ 254 +LT H+Q I + +S + +L +G D + LWD+ +Q Sbjct: 371 LLTGHEQEIYSLDFSKDGKTL------VSGSGDRTVCLWDVEAGEQ 410 >SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pombe|chr 2|||Manual Length = 558 Score = 31.5 bits (68), Expect = 0.11 Identities = 16/66 (24%), Positives = 31/66 (46%) Frame = -3 Query: 469 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 290 DG+ SG G+ + W + + + L H +Q +A+ ++ S + + +DG Sbjct: 497 DGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETS----KVATSSIVDG 552 Query: 289 AITLWD 272 +I WD Sbjct: 553 SIKYWD 558 >SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pombe|chr 2|||Manual Length = 494 Score = 31.5 bits (68), Expect = 0.11 Identities = 23/66 (34%), Positives = 35/66 (53%) Frame = -3 Query: 451 SGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWD 272 SGG+DG IR++ P V+ H +AI DV + S +++AGG +I +WD Sbjct: 182 SGGYDGTIRLWDTRIADPEVMSFSHGEAI-DVVLPMQSGST----VISAGG--PSIKVWD 234 Query: 271 LYNSKQ 254 L +Q Sbjct: 235 LVAGRQ 240 Score = 27.9 bits (59), Expect = 1.3 Identities = 24/107 (22%), Positives = 50/107 (46%) Frame = -3 Query: 592 IIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSW 413 + G+A+ ++QIF+L + S+ LD + + ++ F SG D ++++ Sbjct: 97 LAGDATGLVQIFDLSTR--SILRALDAHQFPVHVTQFCPYAN-TTFLSGSDDKTVKVWDL 153 Query: 412 FSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWD 272 + L+ H+ ++ ++ + A + +GG DG I LWD Sbjct: 154 STGAVQYDLSGHEDYVRTASWMS-------ATRLVSGGYDGTIRLWD 193 Score = 25.8 bits (54), Expect = 5.4 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = -3 Query: 625 SVDYHLEQQRG--IIGNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFT 452 ++D L Q G +I I++++L + T KL K+ I + S+ Sbjct: 209 AIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLSNHQKS--ITCLAMNSENTRLL 266 Query: 451 SGGWDGHIRIFS 416 SGG DGH++I++ Sbjct: 267 SGGLDGHVKIYN 278 >SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces pombe|chr 1|||Manual Length = 314 Score = 31.5 bits (68), Expect = 0.11 Identities = 19/70 (27%), Positives = 29/70 (41%) Frame = -3 Query: 469 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 290 D F S GWD ++++ + H + V S + + A+GG DG Sbjct: 161 DNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPD------GSLCASGGRDG 214 Query: 289 AITLWDLYNS 260 + LWDL S Sbjct: 215 TLMLWDLNES 224 >SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces pombe|chr 1|||Manual Length = 556 Score = 30.7 bits (66), Expect = 0.19 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -3 Query: 460 VFTSGGWDGHIRIFSWFSMRPLV-VLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAI 284 V +SGG D HI + VLT H+Q + + +++ + ++A+GG D A+ Sbjct: 345 VLSSGGRDNHILHRDVRAPEHYFRVLTAHRQEVCGLEWNSNE------NLLASGGNDNAL 398 Query: 283 TLWDLYNSK 257 +WD + K Sbjct: 399 MVWDKFEEK 407 Score = 29.5 bits (63), Expect = 0.44 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = -3 Query: 472 SDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGG-- 299 S+ + SGG D + ++ F +PL H A++ + +S + I+A+GG Sbjct: 384 SNENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRG-----ILASGGGT 438 Query: 298 LDGAITLWD 272 D I LW+ Sbjct: 439 ADRTIKLWN 447 >SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pombe|chr 2|||Manual Length = 380 Score = 30.7 bits (66), Expect = 0.19 Identities = 18/70 (25%), Positives = 31/70 (44%) Frame = -3 Query: 466 GKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGA 287 G + SG WD +RI++ L +L H + I V+ S + + A DG Sbjct: 150 GTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISAD------GTLCATASYDGM 203 Query: 286 ITLWDLYNSK 257 +WD+ + + Sbjct: 204 ARIWDVLSGQ 213 >SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 421 Score = 30.3 bits (65), Expect = 0.25 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -3 Query: 475 RSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGG- 299 RS G++ SGG D ++ ++ + S RPL EH A++ + +S + I+A+GG Sbjct: 259 RSLGQL-ASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSPHQRG-----ILASGGG 312 Query: 298 -LDGAITL 278 +D +T+ Sbjct: 313 TIDRCLTI 320 >SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharomyces pombe|chr 1|||Manual Length = 399 Score = 29.9 bits (64), Expect = 0.33 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = -3 Query: 469 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 290 DG +GG D +R+ W S +T + + V S K +AAG DG Sbjct: 115 DGTYIATGGMDSQVRL--WKSSTGFEFITAFETVDEIVWLSWHP----KGLFLAAGCNDG 168 Query: 289 AITLWDLYNSK 257 +I +W L + K Sbjct: 169 SIWMWSLPSGK 179 >SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5 Taf72|Schizosaccharomyces pombe|chr 3|||Manual Length = 643 Score = 29.5 bits (63), Expect = 0.44 Identities = 17/82 (20%), Positives = 35/82 (42%) Frame = -3 Query: 493 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 314 + V DG S +G I ++ + R + + H+ I +++S E + Sbjct: 508 VTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSREST------V 561 Query: 313 MAAGGLDGAITLWDLYNSKQ*N 248 + +GG D + WD++ + N Sbjct: 562 LVSGGSDCTVRAWDVFKTNYNN 583 >SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharomyces pombe|chr 1|||Manual Length = 398 Score = 29.5 bits (63), Expect = 0.44 Identities = 23/84 (27%), Positives = 39/84 (46%) Frame = -3 Query: 520 LDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTE 341 L T+K+ ++ ++G SG +G + I+ + VLT H +AIQ V +S+ Sbjct: 18 LTTTLKHGHATSIRFSTNGYHLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQSVCWSS- 76 Query: 340 KVSLWKAYIMAAGGLDGAITLWDL 269 +++ A D LWDL Sbjct: 77 ----CDRFLLTA-SRDWKCILWDL 95 >SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces pombe|chr 2|||Manual Length = 340 Score = 28.7 bits (61), Expect = 0.77 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -3 Query: 304 GGLDGAITLWDLYNS 260 GG+DGAI +WDL N+ Sbjct: 195 GGIDGAIKIWDLRNN 209 >SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|Schizosaccharomyces pombe|chr 3|||Manual Length = 638 Score = 28.7 bits (61), Expect = 0.77 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 12/96 (12%) Frame = -3 Query: 520 LDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRP--LVVLTEH---KQAIQDV 356 L+ T IN + G + TS G D + F W S +P + L +H K D Sbjct: 482 LNFTTTQKDINHATISNSGILVTSSGTDN--QTFVWDSRKPDKPLSLLKHGKTKMIHFDG 539 Query: 355 AYSTE-----KVSLW--KAYIMAAGGLDGAITLWDL 269 A E ++ W K + GG DG + +WDL Sbjct: 540 ANEEEVDAGINMAQWQPKGNLFVTGGSDGIVKVWDL 575 Score = 28.3 bits (60), Expect = 1.0 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = -3 Query: 496 GINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVV-LTEHKQAIQDVAYSTEKVSL 329 GIN + + G +F +GG DG ++++ P + TE AI +S + L Sbjct: 548 GINMAQWQPKGNLFVTGGSDGIVKVWDLRLNNPFIQNFTEMNSAITYGGFSEDASKL 604 >SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosaccharomyces pombe|chr 1|||Manual Length = 703 Score = 27.9 bits (59), Expect = 1.3 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = -3 Query: 451 SGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWD 272 SG D IRI+ + +PL+VL + I K+ G DG++ LWD Sbjct: 604 SGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKI---------ISGNDGSVKLWD 654 Query: 271 LYNSK 257 + K Sbjct: 655 VRTGK 659 >SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||Manual Length = 404 Score = 27.9 bits (59), Expect = 1.3 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = -3 Query: 316 IMAAGGLDGAITLWDLYNSKQ*NDQIML 233 +M +GG + +I +WDL N Q D+ ++ Sbjct: 62 LMVSGGANSSINVWDLQNIDQKEDEDLI 89 >SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 642 Score = 27.5 bits (58), Expect = 1.8 Identities = 16/68 (23%), Positives = 29/68 (42%) Frame = -3 Query: 472 SDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLD 293 +DG S G I+++ S V +H + +++S + I+ +GG D Sbjct: 539 ADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNK------ILVSGGAD 592 Query: 292 GAITLWDL 269 + WDL Sbjct: 593 TDVNFWDL 600 >SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharomyces pombe|chr 1|||Manual Length = 520 Score = 27.5 bits (58), Expect = 1.8 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 469 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAY 350 DG++ GG GHI F W + + L L ++ ++DV + Sbjct: 112 DGRMILLGGRKGHISAFDWRTGKLLTEL-HLRETVRDVKW 150 >SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr 1|||Manual Length = 1315 Score = 27.5 bits (58), Expect = 1.8 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Frame = -3 Query: 520 LDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFS------WFSMR 401 + ++++ +N + + DG++F SG D ++ FS WFS R Sbjct: 175 IQISVQGINVNCIVSSEDGRIFFSGNKDPNLYEFSYQLEEGWFSRR 220 >SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosaccharomyces pombe|chr 1|||Manual Length = 614 Score = 27.1 bits (57), Expect = 2.3 Identities = 23/104 (22%), Positives = 46/104 (44%) Frame = -3 Query: 580 ASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMR 401 A+NV + G+K +L + ++ + + DGK +G D I+++ + + Sbjct: 335 AANVFDV-QTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQK 393 Query: 400 PLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDL 269 V + H+Q I + +S +I++ G D LWD+ Sbjct: 394 VRYVFSGHEQDIYSLDFSHN-----GRFIVSGSG-DRTARLWDV 431 >SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 507 Score = 27.1 bits (57), Expect = 2.3 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = -3 Query: 469 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 290 D SG D IRI+ S + L L+ H + + VAY+ Y A+ G D Sbjct: 439 DDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPV-----DPYQFASAGDDN 493 Query: 289 AITLW 275 + +W Sbjct: 494 TVRIW 498 >SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 962 Score = 26.6 bits (56), Expect = 3.1 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = -3 Query: 397 LVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNSKQ 254 L + EH ++ V S K S K+ ++A+GGLD I +WD YN Q Sbjct: 116 LSTIGEHTDYVKRV--SIPKYS--KSPLVASGGLDKRIIVWD-YNVGQ 158 >SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual Length = 438 Score = 26.6 bits (56), Expect = 3.1 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -2 Query: 605 TAKRNHRQCFKCDT 564 + K+ H QCFKCDT Sbjct: 274 SGKKLHPQCFKCDT 287 >SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosaccharomyces pombe|chr 1|||Manual Length = 524 Score = 25.4 bits (53), Expect = 7.2 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = -3 Query: 460 VFTSGGWDGHIRIF 419 +F SG WDG+IR++ Sbjct: 425 LFASGSWDGNIRLW 438 >SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 424 Score = 25.4 bits (53), Expect = 7.2 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +3 Query: 399 GLIENHENIRMCPSQPPLVNTLPSLRVFTLLMPGFLIVTSNLRVKLKSFLPKLNICITFE 578 GL E+HENIR P P R+ L + ++ L + F+ K + + Sbjct: 68 GLFESHENIRFYPIPSLPAYLQPKNRLQFLFLGPLKVLHQFLALNWALFVRKPASFLFIQ 127 Query: 579 ALPMIPL 599 P IP+ Sbjct: 128 NPPCIPV 134 >SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git5|Schizosaccharomyces pombe|chr 2|||Manual Length = 305 Score = 25.4 bits (53), Expect = 7.2 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = -3 Query: 493 INKVKTRSDGKVFTSGGWDGHIRIFS 416 I+ + SDG + +G WD +R++S Sbjct: 277 ISSLALTSDGTMLATGSWDECVRLWS 302 >SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schizosaccharomyces pombe|chr 1|||Manual Length = 328 Score = 25.0 bits (52), Expect = 9.5 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = -3 Query: 493 INKVKTRSDGKVFTSGGWDGHIRI 422 IN + G + SGG DG++R+ Sbjct: 291 INTIAVHPKGTGYASGGEDGYVRV 314 >SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|Schizosaccharomyces pombe|chr 2|||Manual Length = 2337 Score = 25.0 bits (52), Expect = 9.5 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -3 Query: 586 GNASNVIQIFNLGRKDLSLTLKLDV 512 GN SNVI N+G +++ + LDV Sbjct: 1716 GNNSNVINTLNVGISTVNIDIWLDV 1740 >SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 502 Score = 25.0 bits (52), Expect = 9.5 Identities = 23/90 (25%), Positives = 40/90 (44%) Frame = -3 Query: 586 GNASNVIQIFNLGRKDLSLTLKLDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFS 407 G+ N ++I+N+ + L TL I V+ +++S +D IRI+ Sbjct: 245 GSKDNTVRIWNVKLRTLLFTLSGHTA----PITCVRWGGQNWIYSSS-YDKTIRIWDAKD 299 Query: 406 MRPLVVLTEHKQAIQDVAYSTEKVSLWKAY 317 + L +L H + ++ STE V AY Sbjct: 300 GKCLHILKGHAARVNHLSLSTEHVLRSGAY 329 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,557,865 Number of Sequences: 5004 Number of extensions: 50282 Number of successful extensions: 198 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 192 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 293780908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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