Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H23
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   1.6  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   2.7  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       24   3.6  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 384 VRTTKGLIENHENIRMCPSQPPLVNTLP 467
           ++  KG IE  E    CP QP    T+P
Sbjct: 55  LKKRKGAIEELERALSCPGQPSKCVTIP 82


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +3

Query: 468 SLRVFTLLMPGFLIVTSNLRVKL----KSFLPKLNICITFEALPMIPLCCSRW*STDIGH 635
           +L +  L +PG +    NL + L    ++   +   C T   + ++P CC  W S  + +
Sbjct: 139 ALTLVGLFVPGIITSLLNLLMYLDDARRNRRDRQPCCSTLLCVVVVPFCCRYWHSLRLSY 198

Query: 636 S 638
           +
Sbjct: 199 A 199


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 499 PGINKVKT-RSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAI 365
           P   + KT +S GKV  S  WD H   F  +  +  ++ +++ +A+
Sbjct: 58  PAPKRGKTQKSAGKVMASVFWDAHGIFFIEYLQKGKIINSDYYKAL 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,523
Number of Sequences: 2352
Number of extensions: 12478
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)