Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H22
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 103 8e-22
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 103 8e-22
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 103 8e-22
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 103 8e-22
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 103 8e-22
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 103 8e-22
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 31 2.9
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 31 2.9
X94553-1|CAA64246.1| 500|Homo sapiens fork head like protein pr... 31 5.0
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 30 6.6
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 30 6.6
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 30 6.6
BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein. 30 6.6
BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for IM... 30 6.6
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 30 6.6
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 30 6.6
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 30 6.6
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 30 6.6
L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related prote... 30 8.8
BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein pr... 30 8.8
AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related pro... 30 8.8
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 103 bits (246), Expect = 8e-22
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = -2
Query: 645 LKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKN 466
+K S + +K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL
Sbjct: 172 IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSL 229
Query: 465 GLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWG 286
G TVKQPV+V DV++GIVNA +D D + + VGP RYLL LV + + + +
Sbjct: 230 GWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR----- 284
Query: 285 GYIRYDMKYDPILPLK-VALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVT 109
++ + + P+ + VA V ISP P + + +ER +D + +P LEDLG+
Sbjct: 285 LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLPGLEDLGIQ 339
Query: 108 LTHMEDQVPWELKPFRAHQY 49
T +E + L+ R +++
Sbjct: 340 ATPLELKAIEVLRRHRTYRW 359
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 103 bits (246), Expect = 8e-22
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = -2
Query: 645 LKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKN 466
+K S + +K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL
Sbjct: 174 IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSL 231
Query: 465 GLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWG 286
G TVKQPV+V DV++GIVNA +D D + + VGP RYLL LV + + + +
Sbjct: 232 GWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR----- 286
Query: 285 GYIRYDMKYDPILPLK-VALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVT 109
++ + + P+ + VA V ISP P + + +ER +D + +P LEDLG+
Sbjct: 287 LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLPGLEDLGIQ 341
Query: 108 LTHMEDQVPWELKPFRAHQY 49
T +E + L+ R +++
Sbjct: 342 ATPLELKAIEVLRRHRTYRW 361
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 103 bits (246), Expect = 8e-22
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = -2
Query: 645 LKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKN 466
+K S + +K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL
Sbjct: 174 IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSL 231
Query: 465 GLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWG 286
G TVKQPV+V DV++GIVNA +D D + + VGP RYLL LV + + + +
Sbjct: 232 GWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR----- 286
Query: 285 GYIRYDMKYDPILPLK-VALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVT 109
++ + + P+ + VA V ISP P + + +ER +D + +P LEDLG+
Sbjct: 287 LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLPGLEDLGIQ 341
Query: 108 LTHMEDQVPWELKPFRAHQY 49
T +E + L+ R +++
Sbjct: 342 ATPLELKAIEVLRRHRTYRW 361
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 103 bits (246), Expect = 8e-22
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = -2
Query: 645 LKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKN 466
+K S + +K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL
Sbjct: 174 IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSL 231
Query: 465 GLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWG 286
G TVKQPV+V DV++GIVNA +D D + + VGP RYLL LV + + + +
Sbjct: 232 GWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR----- 286
Query: 285 GYIRYDMKYDPILPLK-VALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVT 109
++ + + P+ + VA V ISP P + + +ER +D + +P LEDLG+
Sbjct: 287 LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLPGLEDLGIQ 341
Query: 108 LTHMEDQVPWELKPFRAHQY 49
T +E + L+ R +++
Sbjct: 342 ATPLELKAIEVLRRHRTYRW 361
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 103 bits (246), Expect = 8e-22
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = -2
Query: 645 LKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKN 466
+K S + +K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL
Sbjct: 135 IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSL 192
Query: 465 GLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWG 286
G TVKQPV+V DV++GIVNA +D D + + VGP RYLL LV + + + +
Sbjct: 193 GWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR----- 247
Query: 285 GYIRYDMKYDPILPLK-VALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVT 109
++ + + P+ + VA V ISP P + + +ER +D + +P LEDLG+
Sbjct: 248 LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLPGLEDLGIQ 302
Query: 108 LTHMEDQVPWELKPFRAHQY 49
T +E + L+ R +++
Sbjct: 303 ATPLELKAIEVLRRHRTYRW 322
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 103 bits (246), Expect = 8e-22
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = -2
Query: 645 LKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKN 466
+K S + +K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL
Sbjct: 174 IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSL 231
Query: 465 GLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWG 286
G TVKQPV+V DV++GIVNA +D D + + VGP RYLL LV + + + +
Sbjct: 232 GWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAHR----- 286
Query: 285 GYIRYDMKYDPILPLK-VALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVT 109
++ + + P+ + VA V ISP P + + +ER +D + +P LEDLG+
Sbjct: 287 LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLPGLEDLGIQ 341
Query: 108 LTHMEDQVPWELKPFRAHQY 49
T +E + L+ R +++
Sbjct: 342 ATPLELKAIEVLRRHRTYRW 361
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -1
Query: 682 LFKX*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 575
L K RTS S E+T C NK + GRV + G PN
Sbjct: 275 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 310
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -1
Query: 682 LFKX*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 575
L K RTS S E+T C NK + GRV + G PN
Sbjct: 276 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 311
>X94553-1|CAA64246.1| 500|Homo sapiens fork head like protein
protein.
Length = 500
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 3 WLEGLVSGTLQADPCSTDGREKVSVPTEPGLP 98
W GL SGT + DP S+ + + SVP PG P
Sbjct: 121 WAAGL-SGTARDDPLSSPQKGRASVPGTPGPP 151
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 1576 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 1635
Query: 492 SNL 484
NL
Sbjct: 1636 LNL 1638
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 1548 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 1607
Query: 492 SNL 484
NL
Sbjct: 1608 LNL 1610
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 1577 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 1636
Query: 492 SNL 484
NL
Sbjct: 1637 LNL 1639
>BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein.
Length = 797
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 88 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 147
Query: 492 SNL 484
NL
Sbjct: 148 LNL 150
>BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for
IMAGE:3347229) protein.
Length = 797
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 88 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 147
Query: 492 SNL 484
NL
Sbjct: 148 LNL 150
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 1556 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 1615
Query: 492 SNL 484
NL
Sbjct: 1616 LNL 1618
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 1534 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 1593
Query: 492 SNL 484
NL
Sbjct: 1594 LNL 1596
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 1577 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 1636
Query: 492 SNL 484
NL
Sbjct: 1637 LNL 1639
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 669 EEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSEDRFLRSLVNKMRSH 493
EE P ++ S+W++ + E V EE+P I A I YG D +R +
Sbjct: 1588 EERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLDWQRHGARRMIRHY 1647
Query: 492 SNL 484
NL
Sbjct: 1648 LNL 1650
>L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = -2
Query: 666 EHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVN 508
EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N
Sbjct: 1169 EHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQIN 1220
>BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein
protein.
Length = 1162
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = -2
Query: 666 EHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVN 508
EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N
Sbjct: 869 EHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQIN 920
>AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = -2
Query: 666 EHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVN 508
EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N
Sbjct: 1169 EHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQIN 1220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,169,522
Number of Sequences: 237096
Number of extensions: 2475509
Number of successful extensions: 8603
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8591
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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