SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H20
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    30   0.066
AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450 pr...    25   3.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 699  QLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLET 565
            Q PS+  GG++  K+ +K SRD   + +N + +  + +   F ET
Sbjct: 1382 QQPSLTTGGAVPFKLLTKKSRDQALKAINFIEREQQQEMEIFEET 1426


>AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450
           protein.
          Length = 103

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 101 FHQLPCVTAQETLAECPIIAYEINDGTT 18
           FH +P    + TLA+C +  Y +   TT
Sbjct: 10  FHIVPVSGPRRTLADCSLGGYRVPKDTT 37


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,258
Number of Sequences: 2352
Number of extensions: 15164
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -