Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H20
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   4.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   4.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.3  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   9.3  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   9.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.3  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 177 FIWNLMVPLXFINLLRHGLL 236
           FIW  ++PL FI L    LL
Sbjct: 225 FIWAYVIPLIFIILFYSRLL 244


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 177 FIWNLMVPLXFINLLRHGLL 236
           FIW  ++PL FI L    LL
Sbjct: 225 FIWAYVIPLIFIILFYSRLL 244


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 180 IWNLMVPLXFINLLRHGLLVGEKTRXIYQLC 272
           IW L V + F+N     +   + +  I+ +C
Sbjct: 7   IWTLAVNVLFVNSFLFVIAAQDSSGRIFTIC 37


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 180 IWNLMVPLXFINLLRHGLLVGEKTRXIYQLC 272
           IW L V + F+N     +   + +  I+ +C
Sbjct: 7   IWTLAVNVLFVNSFLFVIAAQDSSGRIFTIC 37


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 180 IWNLMVPLXFINLLRHGLLVGEKTRXIYQLC 272
           IW L V + F+N     +   + +  I+ +C
Sbjct: 7   IWTLAVNVLFVNSFLFVIAAQDSSGRIFTIC 37


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 148 GHVDMTPDELAQNVHLSINFLVS 80
           G  ++TPD+  ++VH  I   VS
Sbjct: 79  GTRELTPDDFTEDVHEIIEQCVS 101


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 148 GHVDMTPDELAQNVHLSINFLVS 80
           G  ++TPD+  ++VH  I   VS
Sbjct: 79  GTRELTPDDFTEDVHEIIEQCVS 101


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 419 KVLASSQCCW 448
           K +A  QCCW
Sbjct: 598 KYVAGEQCCW 607


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,269
Number of Sequences: 438
Number of extensions: 4034
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)