BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_H19 (457 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 188 7e-47 UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 151 9e-36 UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 120 1e-26 UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 115 6e-25 UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 95 5e-19 UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 94 1e-18 UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 93 3e-18 UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 93 3e-18 UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 87 2e-16 UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 79 3e-14 UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12 UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 58 7e-08 UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 58 1e-07 UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 54 2e-06 UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 51 1e-05 UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 50 2e-05 UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 48 7e-05 UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 48 1e-04 UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 48 1e-04 UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 48 1e-04 UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 46 5e-04 UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 45 7e-04 UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 44 0.001 UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps... 43 0.004 UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati... 42 0.005 UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 42 0.008 UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 40 0.019 UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick... 40 0.025 UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ... 40 0.034 UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=... 39 0.044 UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureapla... 38 0.077 UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein ... 36 0.31 UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=... 36 0.41 UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ... 36 0.41 UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639... 36 0.55 UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 36 0.55 UniRef50_Q7R4R8 Cluster: GLP_440_63181_70326; n=1; Giardia lambl... 34 1.7 UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma ... 33 2.9 UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma ... 32 5.1 UniRef50_Q0CSH9 Cluster: Predicted protein; n=1; Aspergillus ter... 32 6.7 UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2; ... 32 6.7 UniRef50_UPI0001552E13 Cluster: PREDICTED: hypothetical protein;... 31 8.9 UniRef50_Q8Z9U9 Cluster: DNA replication and repair protein recF... 31 8.9 >UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular organisms|Rep: 40S ribosomal protein S14 - Homo sapiens (Human) Length = 151 Score = 188 bits (457), Expect = 7e-47 Identities = 89/108 (82%), Positives = 96/108 (88%) Frame = -3 Query: 395 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 216 MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60 Query: 215 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTP 72 KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRATGGN+TKTP Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTP 108 Score = 50.0 bits (114), Expect = 2e-05 Identities = 22/28 (78%), Positives = 25/28 (89%) Frame = -1 Query: 85 KQRXPGPGAQSALRAIARSSMKIGRIED 2 + + PGPGAQSALRA+ARS MKIGRIED Sbjct: 104 RTKTPGPGAQSALRALARSGMKIGRIED 131 >UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania major|Rep: 40S ribosomal protein S14 - Leishmania major Length = 203 Score = 151 bits (365), Expect = 9e-36 Identities = 73/120 (60%), Positives = 87/120 (72%) Frame = -3 Query: 368 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEA 189 K+EV+ GP G+ V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRDE+ Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71 Query: 188 SPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPWSWCSVCTSGXCSFKYEDWPH 9 SPYAAM+AAQDV +CK GI ALH+K+RA GG +TK+P + EDWPH Sbjct: 72 SPYAAMMAAQDVVARCKECGINALHVKMRAVGGVRTKSPGPGRPGRPPRARPRRDEDWPH 131 >UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreococcus tauri|Rep: 40S ribosomal protein S14 - Ostreococcus tauri Length = 243 Score = 120 bits (290), Expect = 1e-26 Identities = 55/66 (83%), Positives = 62/66 (93%) Frame = -3 Query: 269 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGG 90 HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLAAQDVA +CK LGITALHIK+RA GG Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGG 149 Query: 89 NKTKTP 72 NKTK+P Sbjct: 150 NKTKSP 155 Score = 48.8 bits (111), Expect = 5e-05 Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = -3 Query: 386 RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 270 R V+ V T +GPQ GE VFGVAHIFASFNDTFV Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44 Score = 46.8 bits (106), Expect = 2e-04 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -1 Query: 85 KQRXPGPGAQSALRAIARSSMKIGRIED 2 K + PGPG QSALRA++RS +KIGRIED Sbjct: 151 KTKSPGPGGQSALRALSRSGIKIGRIED 178 >UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep: Ribosomal protein S14 - Palaemonetes pugio Length = 77 Score = 115 bits (276), Expect = 6e-25 Identities = 55/70 (78%), Positives = 58/70 (82%) Frame = -3 Query: 395 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 216 MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60 Query: 215 KVKADRDEAS 186 KVKADRDE+S Sbjct: 61 KVKADRDESS 70 >UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archaea|Rep: 30S ribosomal protein S11P - Methanococcus jannaschii Length = 129 Score = 95.5 bits (227), Expect = 5e-19 Identities = 43/81 (53%), Positives = 58/81 (71%) Frame = -3 Query: 314 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 135 +G+ HI++S+N+T +H TD++G ETIARV+GG + RDE SPYAAM AA +AE K Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68 Query: 134 LGITALHIKLRATGGNKTKTP 72 GI +HIK+RA GG+ K P Sbjct: 69 RGIENIHIKVRAPGGSGQKNP 89 Score = 45.6 bits (103), Expect = 5e-04 Identities = 18/27 (66%), Positives = 25/27 (92%) Frame = -1 Query: 82 QRXPGPGAQSALRAIARSSMKIGRIED 2 Q+ PGPGAQ+A+RA+AR+ ++IGRIED Sbjct: 86 QKNPGPGAQAAIRALARAGLRIGRIED 112 >UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella natans|Rep: Ribosomal protein S14 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 145 Score = 94.3 bits (224), Expect = 1e-18 Identities = 41/77 (53%), Positives = 56/77 (72%) Frame = -3 Query: 317 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 138 +FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +D+ S Y AMLA Q V+ CK Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70 Query: 137 TLGITALHIKLRATGGN 87 LGI ALHIK+RA GGN Sbjct: 71 VLGINALHIKIRARGGN 87 >UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 - uncultured euryarchaeote ARMAN-2 Length = 169 Score = 92.7 bits (220), Expect = 3e-18 Identities = 45/81 (55%), Positives = 59/81 (72%) Frame = -3 Query: 314 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 135 + VAH+++S NDT + +TDLSG ETIA +GGM V AD E SPYAAM AA VA + K Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKE 105 Query: 134 LGITALHIKLRATGGNKTKTP 72 GIT ++I++RA GG+ +KTP Sbjct: 106 KGITNINIEIRAPGGHGSKTP 126 Score = 35.1 bits (77), Expect = 0.72 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = -1 Query: 79 RXPGPGAQSALRAIARSSMKIGRIED 2 + PG GAQ+ +R +ARS +++ RIED Sbjct: 124 KTPGHGAQAVVRVLARSGLRVNRIED 149 >UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermoprotei|Rep: 30S ribosomal protein S11P - Cenarchaeum symbiosum Length = 198 Score = 92.7 bits (220), Expect = 3e-18 Identities = 40/90 (44%), Positives = 61/90 (67%) Frame = -3 Query: 341 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 162 P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR E+SP+AAM AA Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAA 125 Query: 161 QDVAEKCKTLGITALHIKLRATGGNKTKTP 72 V E + G T HI++RA GG ++ P Sbjct: 126 NKVIESARAKGFTGFHIRVRAVGGVGSRVP 155 Score = 42.3 bits (95), Expect = 0.005 Identities = 17/26 (65%), Positives = 22/26 (84%) Frame = -1 Query: 79 RXPGPGAQSALRAIARSSMKIGRIED 2 R PGPGAQ+A+RA+AR +IGRI+D Sbjct: 153 RVPGPGAQAAIRALARGGFRIGRIDD 178 >UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_246, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 182 Score = 86.6 bits (205), Expect = 2e-16 Identities = 42/76 (55%), Positives = 50/76 (65%) Frame = -3 Query: 245 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPWS 66 ET+ R TGGMK K D +E+SP AAM AAQDV+++CK L IT LH+KL A GNKTKTP Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHAARGNKTKTPGP 109 Query: 65 WCSVCTSGXCSFKYED 18 CSF E+ Sbjct: 110 GAQSALQAPCSFWNEN 125 >UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein S14 - Homo sapiens (Human) Length = 350 Score = 79.4 bits (187), Expect = 3e-14 Identities = 36/49 (73%), Positives = 42/49 (85%) Frame = -3 Query: 218 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTP 72 MK +AD+DE+SP AML AQDV ++CK LGITALHIKL ATGGN+TKTP Sbjct: 1 MKEQADQDESSPCTAMLTAQDVVQRCKELGITALHIKLLATGGNRTKTP 49 >UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 104 Score = 73.7 bits (173), Expect = 2e-12 Identities = 35/54 (64%), Positives = 42/54 (77%) Frame = -3 Query: 245 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNK 84 ET+ R TGGMK KAD +E+SP AAM AAQDV+++ K L IT LH+KL A GGNK Sbjct: 29 ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDITVLHVKLHAAGGNK 82 >UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1; Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry - Rattus norvegicus Length = 119 Score = 58.4 bits (135), Expect = 7e-08 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Frame = -3 Query: 353 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVKADRDEASPYA 177 ++L PQ + G+ V GV +IFASF D+F++ TD+ G+ T VT MK + E +P Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ--YAETNPCH 62 Query: 176 AMLA-AQDVAEKCKTLGITALHIKLRATGGNKTK 78 + A DV + K + + ALHI+L+ T G K Sbjct: 63 RLHAGCLDVTHRFKEMSVPALHIRLQDTEGTWLK 96 >UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; Oryza sativa|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 332 Score = 57.6 bits (133), Expect = 1e-07 Identities = 36/62 (58%), Positives = 39/62 (62%), Gaps = 9/62 (14%) Frame = -3 Query: 230 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK------TLGITALH---IKLRATGGNKTK 78 V GGMK+KAD DE+SPYAAML +QDVA CK LG L I L A GGNKT Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCKYRTNGQILGDCFLEFCLIMLCAAGGNKTN 270 Query: 77 TP 72 TP Sbjct: 271 TP 272 Score = 35.9 bits (79), Expect = 0.41 Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = -1 Query: 85 KQRXPGPGAQSALR--AIARSSMKIGRI 8 K PGP AQSALR A+ARS M IGRI Sbjct: 268 KTNTPGPDAQSALRALALARSGMNIGRI 295 >UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter pomeroyi Length = 130 Score = 53.6 bits (123), Expect = 2e-06 Identities = 25/76 (32%), Positives = 44/76 (57%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 GVAH+ ++FN+T + ++D+ G G M K R +++PYAA LAA+D K + Sbjct: 20 GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDH 78 Query: 131 GITALHIKLRATGGNK 84 G+ L ++++ G + Sbjct: 79 GVKTLEVEVQGPGSGR 94 >UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus mutans Length = 127 Score = 51.2 bits (117), Expect = 1e-05 Identities = 23/76 (30%), Positives = 43/76 (56%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+AHI A+FN+T V +TD+ G G + K R +++P+AA +AA+ A+ + Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75 Query: 131 GITALHIKLRATGGNK 84 G+ + + ++ G + Sbjct: 76 GLKTVEVTVKGPGSGR 91 >UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular organisms|Rep: Ribosomal protein S11 - Chlorokybus atmophyticus (Soil alga) Length = 262 Score = 50.4 bits (115), Expect = 2e-05 Identities = 28/73 (38%), Positives = 40/73 (54%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 GVAHI + N+T + +TDL G +G + K R + S YAA AA+ A+K L Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQL 210 Query: 131 GITALHIKLRATG 93 GI + +K+R G Sbjct: 211 GIKDVTVKIRGFG 223 >UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis vadensis ATCC BAA-548|Rep: Ribosomal protein S11 - Victivallis vadensis ATCC BAA-548 Length = 148 Score = 48.4 bits (110), Expect = 7e-05 Identities = 24/76 (31%), Positives = 43/76 (56%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+A++ A+FN+T V TDL G I TGG +++ YAA + A D A+K + + Sbjct: 38 GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLV 96 Query: 131 GITALHIKLRATGGNK 84 G+ + ++++ G + Sbjct: 97 GMKEVEVRIKGPGAGR 112 >UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular organisms|Rep: 30S ribosomal protein S11 - Shewanella oneidensis Length = 130 Score = 48.0 bits (109), Expect = 1e-04 Identities = 24/73 (32%), Positives = 40/73 (54%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+AHI ASFN+T V +TD G +GG + R +++P+AA +AA+ + Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDY 78 Query: 131 GITALHIKLRATG 93 G+ L + ++ G Sbjct: 79 GLKNLEVFVKGPG 91 >UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular organisms|Rep: 30S ribosomal protein S11 - Polaromonas sp. (strain JS666 / ATCC BAA-500) Length = 134 Score = 48.0 bits (109), Expect = 1e-04 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+AH+ ASFN+T + +TD G +GG K R +++P+AA +A++ Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQ 82 Query: 131 GITALHIKLRATG 93 GI L ++++ G Sbjct: 83 GIKNLDVEIKGPG 95 >UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular organisms|Rep: 30S ribosomal protein S11 - Acidobacteria bacterium (strain Ellin345) Length = 142 Score = 47.6 bits (108), Expect = 1e-04 Identities = 24/76 (31%), Positives = 42/76 (55%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+AHI ASFN+T V ++D SG + +G + + R + +P+AA AA A + Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDH 90 Query: 131 GITALHIKLRATGGNK 84 G+ +L +++ G + Sbjct: 91 GMRSLDVRVAGPGSGR 106 >UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular organisms|Rep: 30S ribosomal protein S11 - Bacillus subtilis Length = 131 Score = 45.6 bits (103), Expect = 5e-04 Identities = 22/76 (28%), Positives = 41/76 (53%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+AHI ++FN+T V +TD G G + + R +++P+AA +AA+ A+ Sbjct: 21 GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAKGSIEH 79 Query: 131 GITALHIKLRATGGNK 84 G+ L + ++ G + Sbjct: 80 GLKTLEVTVKGPGSGR 95 >UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus oeni ATCC BAA-1163|Rep: Ribosomal protein S11 - Oenococcus oeni ATCC BAA-1163 Length = 113 Score = 45.2 bits (102), Expect = 7e-04 Identities = 28/92 (30%), Positives = 45/92 (48%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 GVAHI ++FN+T V +TD +G G + K R +++P+AA LA + A+ Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAKAAMEQ 80 Query: 131 GITALHIKLRATGGNKTKTPWSWCSVCTSGXC 36 + ++ I + K P W +C S C Sbjct: 81 NMHSVAISV--------KGPGIWTRICNSCCC 104 >UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma pulmonis Length = 136 Score = 44.4 bits (100), Expect = 0.001 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 GVAHI ++ N+T V +D G +G + K + + + YAA LAAQ+ +EK K Sbjct: 21 GVAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTA-YAAGLAAQNASEKAKEH 79 Query: 131 GITALHIKLRATG 93 GI + ++++ G Sbjct: 80 GIREVSVRVKGIG 92 >UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11 - Ostreococcus tauri Length = 121 Score = 42.7 bits (96), Expect = 0.004 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = -3 Query: 299 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITA 120 I + N+TFV++TDL G +G + K + ++S YAA + V + C I Sbjct: 15 ISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSK-KSSSYAAQSTTEKVLQFCAQQSIEK 73 Query: 119 LHIKLRATG 93 L IKLR G Sbjct: 74 LMIKLRGVG 82 >UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative; n=19; Spermatophyta|Rep: Small subunit ribosomal protein, putative - Oryza sativa subsp. japonica (Rice) Length = 366 Score = 42.3 bits (95), Expect = 0.005 Identities = 20/69 (28%), Positives = 35/69 (50%) Frame = -3 Query: 302 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 123 H+ N TFV VTD+ G + G ++ + R S YAA A+ V + +G+ Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307 Query: 122 ALHIKLRAT 96 ++ +K++ T Sbjct: 308 SVVMKVKGT 316 >UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole genome shotgun sequence; n=3; cellular organisms|Rep: Chromosome undetermined SCAF14706, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 215 Score = 41.5 bits (93), Expect = 0.008 Identities = 20/72 (27%), Positives = 41/72 (56%) Frame = -3 Query: 308 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 129 +AH+ A++N+T + VTD +G+ ++ R + G + + +++P AA A A K G Sbjct: 106 IAHVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKG 164 Query: 128 ITALHIKLRATG 93 +T + + ++ G Sbjct: 165 VTFVRVVVKGLG 176 >UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal protein S11 - Arabidopsis thaliana (Mouse-ear cress) Length = 138 Score = 40.3 bits (90), Expect = 0.019 Identities = 23/73 (31%), Positives = 35/73 (47%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 GV H+ ASFN+T V VTD+ GR G + R +P+AA AA + Sbjct: 28 GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTAAGNAIRAVVDQ 86 Query: 131 GITALHIKLRATG 93 G+ ++++ G Sbjct: 87 GMQRAEVRIKGPG 99 >UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal protein S11 - Neorickettsia sennetsu (strain Miyayama) Length = 120 Score = 39.9 bits (89), Expect = 0.025 Identities = 21/71 (29%), Positives = 38/71 (53%) Frame = -3 Query: 317 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 138 V G AH+ +FN+ ++ VTD G +G + K ++ +++ YAA A + K K Sbjct: 8 VSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKLK 66 Query: 137 TLGITALHIKL 105 +G+ L++ L Sbjct: 67 RIGLKILNVHL 77 >UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; Magnoliophyta|Rep: Small subunit ribosomal protein - Berberis thunbergii (Japanese barberry) Length = 150 Score = 39.5 bits (88), Expect = 0.034 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 2/93 (2%) Frame = -3 Query: 308 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 129 + H+ N+TFV VTD G + G ++ S YAA A+ V + LG Sbjct: 46 LVHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLG 105 Query: 128 ITALHIKLRATGGNKTKTP--WSWCSVCTSGXC 36 + ++ +K++ + K K SW T C Sbjct: 106 MKSVVMKVKGSTYFKKKKAVILSWREGYTFAEC 138 >UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1; Prototheca wickerhamii|Rep: Mitochondrial ribosomal protein S11 - Prototheca wickerhamii Length = 128 Score = 39.1 bits (87), Expect = 0.044 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+ HI ++ N+T + +TDL G G + K R +++ YA+ AA+ +A K Sbjct: 18 GIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSR-KSTVYASGAAAEALASKAFNE 76 Query: 131 GITALHIKLRATGGNK 84 G + +K++ G K Sbjct: 77 GYRTIIVKIKGLGYGK 92 >UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureaplasma parvum|Rep: 30S ribosomal protein S11 - Ureaplasma parvum (Ureaplasma urealyticum biotype 1) Length = 121 Score = 38.3 bits (85), Expect = 0.077 Identities = 19/76 (25%), Positives = 42/76 (55%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+A+I A+ N+T + + D G +G + K + + +PY+A +AA+ A+ + Sbjct: 12 GIAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTK-KKTPYSAGIAAEAAAKAVIDM 70 Query: 131 GITALHIKLRATGGNK 84 G+ ++ + + TG ++ Sbjct: 71 GLKSVEVHVNGTGASR 86 >UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein isoform 1; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein isoform 1 - Strongylocentrotus purpuratus Length = 261 Score = 36.3 bits (80), Expect = 0.31 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = -3 Query: 308 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 129 + +I A++N+T V V + +GR T+AR + G + + + + AA AA A K G Sbjct: 152 IVNIKATYNNTHVSVAEHTGR-TVARTSCGTEGFKNAKKGTAIAAQTAAIAAATKAVDKG 210 Query: 128 ITALHIKLRATG-GNKT 81 + A+ + ++ G G +T Sbjct: 211 MNAVRVVIKGIGPGRQT 227 >UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2; Arabidopsis thaliana|Rep: 30S ribosomal protein S11, putative - Arabidopsis thaliana (Mouse-ear cress) Length = 235 Score = 35.9 bits (79), Expect = 0.41 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = -3 Query: 323 ETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEK 144 ET + HI N+TFV VTD G +G + + + Y A A+++ + Sbjct: 111 ETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRR 170 Query: 143 CKTLGITALHIKL 105 K +G+ ++ +K+ Sbjct: 171 AKAMGLKSVVVKV 183 >UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; n=10; cellular organisms|Rep: Chloroplast 30S ribosomal protein S11 - Cyanidium caldarium Length = 129 Score = 35.9 bits (79), Expect = 0.41 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+ I ++FN+T V TD G+ IA +GG + + +P+AA A + + + Sbjct: 19 GLIIINSTFNNTIVTATDCYGK-VIAWASGGTEGFKGAKKGTPFAAQSATEKLIKALLEQ 77 Query: 131 GITALHIKLRATG-GNKT 81 G +HI + G G +T Sbjct: 78 GTQRIHISVSGPGPGRET 95 >UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639; n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized protein PH1639 - Pyrococcus horikoshii Length = 102 Score = 35.5 bits (78), Expect = 0.55 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +3 Query: 144 FLCYILCR---QHSSVG*RFITVSLHLHATSDTGDSFPAG*ISNMNECVI 284 F C+ C +H +G R I VS + H T+ + F G ISN+N VI Sbjct: 51 FQCFFCCSPSSKHCCIGGRLIPVSFNYHTTAPSAYRFRTGDISNVNNGVI 100 >UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4; Streptophyta|Rep: Plastid 30S ribosomal protein S11 - Epifagus virginiana (Beechdrops) Length = 136 Score = 35.5 bits (78), Expect = 0.55 Identities = 20/50 (40%), Positives = 26/50 (52%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 162 GV H+ SFN+T V VTD+ GR G K R + +AA +AA Sbjct: 28 GVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIAA 76 >UniRef50_Q7R4R8 Cluster: GLP_440_63181_70326; n=1; Giardia lamblia ATCC 50803|Rep: GLP_440_63181_70326 - Giardia lamblia ATCC 50803 Length = 2381 Score = 33.9 bits (74), Expect = 1.7 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -3 Query: 218 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATG-GNKTKTPWSWCSVCTS 45 + V A R + S Y + + D E C + L +K++ G + WSWC CTS Sbjct: 2022 LSVVAMRADNSCYPLLFSQYDRLETCAIYLLAELDLKMQEKSLGGVIEQCWSWCMECTS 2080 >UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma viride|Rep: Ribosomal protein S11 - Mesostigma viride Length = 128 Score = 33.1 bits (72), Expect = 2.9 Identities = 19/70 (27%), Positives = 35/70 (50%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 132 G+ H+ + N+T + +TD G TI + GM + + +A+ AQ + +CK L Sbjct: 18 GILHVQTTLNNTIMTLTDRKG-NTIFGFSSGMLGFGGSRKKTRFASRSVAQHMVLRCKQL 76 Query: 131 GITALHIKLR 102 I L + ++ Sbjct: 77 RIQRLILAIK 86 >UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma capricolum|Rep: 30S ribosomal protein - Mycoplasma capricolum Length = 80 Score = 32.3 bits (70), Expect = 5.1 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -3 Query: 311 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYA 177 G+AHI ++FN+T V V+D G G + K + +++PYA Sbjct: 11 GIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSK-KSTPYA 54 >UniRef50_Q0CSH9 Cluster: Predicted protein; n=1; Aspergillus terreus NIH2624|Rep: Predicted protein - Aspergillus terreus (strain NIH 2624) Length = 399 Score = 31.9 bits (69), Expect = 6.7 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = +2 Query: 149 LLHPVPPT*QRRVTLHHGQPSPSCHQ*HGR*FPGRINQ*HER 274 L HP P V L HG PSPS + G FPG ++ H R Sbjct: 12 LPHPHPTLSPASVDLDHGSPSPSLNAVCGPGFPGVLSLHHYR 53 >UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2; n=2; Saccharomyces cerevisiae|Rep: Good for full DBP5 activity protein 2 - Saccharomyces cerevisiae (Baker's yeast) Length = 566 Score = 31.9 bits (69), Expect = 6.7 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = -3 Query: 335 HLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASP 183 H G + H+F F D V+ +SG + + +V G +KV +RD P Sbjct: 461 HNAGNDAYYTLHLFMKFCD--VNFRKISGMDDVLKVMGQVKVWGERDVREP 509 >UniRef50_UPI0001552E13 Cluster: PREDICTED: hypothetical protein; n=2; Fungi/Metazoa group|Rep: PREDICTED: hypothetical protein - Mus musculus Length = 196 Score = 31.5 bits (68), Expect = 8.9 Identities = 19/76 (25%), Positives = 36/76 (47%) Frame = +1 Query: 148 SATSCAANIAA*GDASSRSAFTFMPPVTRAIVSRPDKSVT*TNVSLNEAKMCATPNTVSP 327 S+++C+ + + SS S+ T T +I S S + T+ S + ++ +T +P Sbjct: 59 SSSTCSTSTTSSTSTSSTSSSTCSTSTTSSITSSTSTSTSSTSTSSTSSTSTSSTSTSTP 118 Query: 328 TKCWGPRVTWTSSLAT 375 T + TSS +T Sbjct: 119 TPSTSTSTSTTSSTST 134 >UniRef50_Q8Z9U9 Cluster: DNA replication and repair protein recF; n=97; Gammaproteobacteria|Rep: DNA replication and repair protein recF - Yersinia pestis Length = 361 Score = 31.5 bits (68), Expect = 8.9 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +3 Query: 333 MLGPEGHLDLLFSNFVFSRGHGSAF-SLRAVKI*KHRPAEFI 455 ++GP G V++ GHG AF SL+A ++ +H AEF+ Sbjct: 28 LVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGRVIRHECAEFV 69 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 483,217,540 Number of Sequences: 1657284 Number of extensions: 9990040 Number of successful extensions: 23353 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 22466 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 23338 length of database: 575,637,011 effective HSP length: 94 effective length of database: 419,852,315 effective search space used: 23931581955 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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