BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_H19 (457 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 0.90 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 1.7 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 1.7 AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 4.8 AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 4.8 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 6.3 AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 8.4 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 23.8 bits (49), Expect = 0.90 Identities = 9/27 (33%), Positives = 16/27 (59%) Frame = +1 Query: 187 DASSRSAFTFMPPVTRAIVSRPDKSVT 267 +A R FT+ + ++I+ PDK +T Sbjct: 500 NADVRPPFTYASLIRQSIIESPDKQLT 526 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 20.6 bits (41), Expect(2) = 1.7 Identities = 5/6 (83%), Positives = 5/6 (83%) Frame = -2 Query: 105 PCYWWK 88 PC WWK Sbjct: 540 PCCWWK 545 Score = 20.2 bits (40), Expect(2) = 1.7 Identities = 5/7 (71%), Positives = 5/7 (71%) Frame = -2 Query: 240 YRPCHWW 220 Y PC WW Sbjct: 538 YYPCCWW 544 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 20.6 bits (41), Expect(2) = 1.7 Identities = 5/6 (83%), Positives = 5/6 (83%) Frame = -2 Query: 105 PCYWWK 88 PC WWK Sbjct: 487 PCCWWK 492 Score = 20.2 bits (40), Expect(2) = 1.7 Identities = 5/7 (71%), Positives = 5/7 (71%) Frame = -2 Query: 240 YRPCHWW 220 Y PC WW Sbjct: 485 YYPCCWW 491 >AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. Length = 145 Score = 21.4 bits (43), Expect = 4.8 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -3 Query: 320 TVFGVAHIFASFNDTFVHVTDLSGRETI 237 ++F + IF N+T VTD ET+ Sbjct: 12 SIFLILIIFIYSNETIAQVTDDENCETL 39 >AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta protein precursor protein. Length = 145 Score = 21.4 bits (43), Expect = 4.8 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -3 Query: 320 TVFGVAHIFASFNDTFVHVTDLSGRETI 237 ++F + IF N+T VTD ET+ Sbjct: 12 SIFLILIIFIYSNETIAQVTDDENCETL 39 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 21.0 bits (42), Expect = 6.3 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -2 Query: 186 TLRCYVGGTGCSREMQ 139 T+RC+ GG S E Q Sbjct: 296 TVRCFTGGPRKSHESQ 311 >AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc finger domain-Z1 isoform protein. Length = 111 Score = 20.6 bits (41), Expect = 8.4 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +2 Query: 17 NLHT*TSNXPKCRLSTRTRXSL 82 N+HT S P C + R SL Sbjct: 24 NVHTRPSKEPICNICKRVYSSL 45 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 133,102 Number of Sequences: 438 Number of extensions: 2630 Number of successful extensions: 12 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12066642 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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