Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H18
         (811 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004990AB Cluster: hypothetical protein 79.t00022; ...    35   2.8  
UniRef50_Q4RTS1 Cluster: Chromosome 2 SCAF14997, whole genome sh...    33   6.4  
UniRef50_Q22KK6 Cluster: DHHC zinc finger domain containing prot...    33   6.4  
UniRef50_Q54US1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  

>UniRef50_UPI00004990AB Cluster: hypothetical protein 79.t00022;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 79.t00022 - Entamoeba histolytica HM-1:IMSS
          Length = 1910

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -1

Query: 706 VIDSTVNIFRCQHALSMASSVLESIPFFFQNSMENFMNCVIINNR 572
           + D  V IFR ++++ M    L  I FFFQ S +N  + ++IN +
Sbjct: 189 IYDDKVVIFRNRNSIQMTQMKLSQIDFFFQLSAQNSNSFMVINEK 233


>UniRef50_Q4RTS1 Cluster: Chromosome 2 SCAF14997, whole genome
           shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 2
           SCAF14997, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1393

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -1

Query: 388 C*LESNCTDWNYPLCLCDI*TEAVQDKLGVFCASWSEPV*CLIIKDT 248
           C LE NC D NY  C CD   EA  +  G+       PV  ++I DT
Sbjct: 813 CSLEENCADMNY-FCNCDADREAWANDTGLLSYKDHLPVSQIVIGDT 858


>UniRef50_Q22KK6 Cluster: DHHC zinc finger domain containing protein;
            n=2; Eukaryota|Rep: DHHC zinc finger domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1751

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = -1

Query: 688  NIFRCQHALSMASSVLESIPF-FFQNSMENFMNCVIINNRVGYRQS-SVNYTGKFLRKQH 515
            N F  QH  S  +S  +     +FQ++ +   N +I+NN  G  Q+ + N+  +F ++Q 
Sbjct: 1048 NTFEPQHRSSSTASYKKGKAIQYFQSNQKLKQNNLILNNCFGVEQNQNQNFENQFEQQQP 1107

Query: 514  I--CHETHQGHT 485
            I  C++ HQ  T
Sbjct: 1108 IEECNQQHQADT 1119


>UniRef50_Q54US1 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 280

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -1

Query: 640 ESIPFFFQNSMENFMNCVIINNRVGYRQSSVNYTGKFLRKQHICHETHQGHTH*TNN 470
           +  P   +N+  N   C  IN++ G  Q S+NY G  + +  + H      T   NN
Sbjct: 9   QECPDLEENNFYNEQQCPDINHKKGSNQRSINYNGNNVNRNSMSHRYEPYKTRNYNN 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,380,683
Number of Sequences: 1657284
Number of extensions: 14880934
Number of successful extensions: 30694
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30691
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)