Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H18
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   3.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.8  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             24   6.4  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 335 HLDGGCTRQARCILC 291
           H   GCT + +C+LC
Sbjct: 496 HKASGCTNEVKCMLC 510


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 86  HRPPPXRHQQ 115
           HRPPP  HQQ
Sbjct: 162 HRPPPIAHQQ 171


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -2

Query: 456 LKLLKCQLLSI*FLFAVWT*HKVVN*SLIVLIGIIRYVYVTFRRRLY-KTSSVYS 295
           +KL K  L++I   F  WT + V+N + I     I  +  T R  L+ K ++VY+
Sbjct: 66  MKLAKVALVTISLWFMAWTPYLVINFTGIFKAAPISPL-ATIRGSLFAKANAVYN 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,288
Number of Sequences: 2352
Number of extensions: 16288
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)