Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H18
         (811 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-P...    30   3.3  
AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembran...    30   3.3  
AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,...    29   9.9  

>AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-PB,
           isoform B protein.
          Length = 636

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 280 QTSWHRIHRACLVQPPSKCHIDITDNSNQY 369
           Q   HRIH A + Q PS C+ +   N+N Y
Sbjct: 479 QHQHHRIHAAPMAQEPSYCYAEPMYNANYY 508


>AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembrane
           protein Pxb protein.
          Length = 636

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 280 QTSWHRIHRACLVQPPSKCHIDITDNSNQY 369
           Q   HRIH A + Q PS C+ +   N+N Y
Sbjct: 479 QHQHHRIHAAPMAQEPSYCYAEPMYNANYY 508


>AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,
           isoform C protein.
          Length = 1173

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 592 CVIINNRVGYRQSSVNYTGKFLRKQHICHETHQGHTH 482
           C+  N++  +  ++ N  G      H  H  HQGH H
Sbjct: 141 CIYNNSKAHHHHNNSNNNGHTQSHIHTNHSLHQGHHH 177


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,973,322
Number of Sequences: 53049
Number of extensions: 700485
Number of successful extensions: 1537
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)