Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H12
         (577 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q047H0 Cluster: Putative uncharacterized protein; n=2; ...    33   4.8  
UniRef50_Q8IHS9 Cluster: Putative uncharacterized protein; n=1; ...    32   8.4  

>UniRef50_Q047H0 Cluster: Putative uncharacterized protein; n=2;
           Lactobacillus delbrueckii subsp. bulgaricus|Rep:
           Putative uncharacterized protein - Lactobacillus
           delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
          Length = 182

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 62  KITKNVTRKQKHNILM*KIIKIGTHYKSINPYSINVHTQGSI 187
           K+TK V ++ KH I M  + K+G  Y +   Y+  +  +GS+
Sbjct: 117 KLTKLVAKRSKHAIAMLSLFKLGDDYYAFLKYNAGLSDEGSL 158


>UniRef50_Q8IHS9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 148

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 134 HYKSINPYSINVHTQGSILYVH 199
           H+KSI PY INV  + +I Y+H
Sbjct: 85  HFKSITPYFINVKLKDNIYYIH 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,929,795
Number of Sequences: 1657284
Number of extensions: 9529683
Number of successful extensions: 16909
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16906
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)