Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_H09
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.62 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.7  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 587 TAEKCSTTFHWSTKFCYIRNISV 519
           T+EKC+ TF W +K  +   I +
Sbjct: 216 TSEKCNLTFSWYSKKVFYSKIII 238


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -3

Query: 629 KTNLIEWNTNRNLSTAEKCST 567
           + + + WN ++ L+  ++CST
Sbjct: 342 RADSVTWNPHKLLTAPQQCST 362


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 153 HPLLVLRYPLVYSY 194
           HPL  + +P VYSY
Sbjct: 105 HPLESVPFPQVYSY 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,316
Number of Sequences: 336
Number of extensions: 4092
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)