Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H09
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15823| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9) 32 0.54
SB_1079| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_21869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_14700| Best HMM Match : MbeB_N (HMM E-Value=1.8) 29 2.9
SB_10164| Best HMM Match : Keratin_B2 (HMM E-Value=3.4) 29 5.1
SB_183| Best HMM Match : IBR (HMM E-Value=0.015) 29 5.1
SB_31681| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_19401| Best HMM Match : Rop (HMM E-Value=3) 28 8.9
SB_36505| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61) 28 8.9
>SB_15823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 48.8 bits (111), Expect = 4e-06
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Frame = -2
Query: 564 ISLEHEILLHPKYFGPQLLETVKQKLYTDVEGTCTGKYGFVIAVTQIDNIGAGLIQHGQG 385
+ ++ + L PKY +++ V+ ++ + V G CT + G+V++V ++ + +
Sbjct: 249 VVIKRRLFLDPKYLDSEIMNHVRDEIVSTVVGECTRELGWVLSVGRLTEV-VNVCD---- 303
Query: 384 FVMYPVKYKAVVFRPFKGEVLDGIVTQVNKVGMFAQIGPL-KCFISHHSIPDYM-EFCPN 211
++ V ++ RP G L G V V G+ ++ + K I S+ Y+ E C N
Sbjct: 304 -TIFRVSFEVETLRPRVGGELVGEVRMVWAGGVLLEVSDIQKVVIPSTSLDGYVFEACSN 362
Query: 210 VNPPCY-----KSKQEDSVIQEEDVIRLKIVGTRVDASGIFAIGTLIG 82
CY + K+ D+V+ +R++ G VD G+ A +G
Sbjct: 363 ----CYVREGERIKEGDTVLVTVTTVRMERFG--VDVDGVMAYAARVG 404
>SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 32.3 bits (70), Expect = 0.41
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +2
Query: 278 CANMPTLFTCVTIPSK--TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAI 442
C + T +TIP T+P L T L LT +T PC P +L+ +
Sbjct: 492 CLVLTTPCLVLTIPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVL 551
Query: 443 TNPYLPVQVPSTSVYSFCLTVSNSC 517
T P L + P + + CL ++ C
Sbjct: 552 TTPCLVLTTPCLVLTTPCLVLTTPC 576
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 326 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 496
T+P L T L LT +T PC P +L+ +T P L + P + S C
Sbjct: 559 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPGLVLTTPGLVLTSPC 618
Query: 497 LTVSNSC 517
L ++ C
Sbjct: 619 LVLTTPC 625
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 326 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 496
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 517 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 576
Query: 497 LTVSNSC 517
L ++ C
Sbjct: 577 LVLTTPC 583
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 326 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 496
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 524 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 583
Query: 497 LTVSNSC 517
L ++ C
Sbjct: 584 LVLTTPC 590
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 326 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 496
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 531 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 590
Query: 497 LTVSNSC 517
L ++ C
Sbjct: 591 LVLTTPC 597
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 344 LNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFCLTVSNS 514
L T L LT +T PC P +L+I +T P L + P + + CL ++
Sbjct: 474 LTTPCLVLTTPCLVLTTPCLVLTTPCLVLTIPCLVLTTPCLVLTTPCLVLTTPCLVLTTP 533
Query: 515 C 517
C
Sbjct: 534 C 534
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 326 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 496
T+P L T L LT +T PC P +L+ +T+P L + P + + C
Sbjct: 573 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPGLVLTTPGLVLTSPCLVLTTPCLVLTTPC 632
Query: 497 LTVSNSC 517
L ++ C
Sbjct: 633 LVLTTPC 639
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 326 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 496
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 489 TTPCLVLTTPCLVLTIPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 548
Query: 497 LTVSNSC 517
L ++ C
Sbjct: 549 LVLTTPC 555
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 326 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 496
T+P L T L LT +T+PC P +L+ +T P L + + S + +FC
Sbjct: 594 TTPCLVLTTPGLVLTTPGLVLTSPCLVLTTPCLVLTTPCLVLTTPCLVLTILSLVLGTFC 653
>SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9)
Length = 483
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWSTKFCYIRNISVHNYWRQSN 495
W+ N ST + CST +WST N S HN W N
Sbjct: 358 WSILNNWSTYDNCSTYNNWSTH----NNWSTHNNWSTYN 392
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWSTKFCYIRNISVHNYW-RQSNRSYTLMWKAP 465
W+T N ST ST +WST N S HN W +N Y K P
Sbjct: 70 WSTYNNWSTYNNWSTYHNWST----YNNWSTHNNWSTYNNWRYLQQLKCP 115
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWSTKFCYIRNISVHNYWRQSN 495
W+T+ N ST ST +WST N S HN W N
Sbjct: 304 WSTHNNWSTYNNWSTHNNWST----YNNWSTHNNWSTYN 338
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWST--KFCYIRNISVHNYW-RQSNRSYTLMWKA 468
W+T+ N ST ST +WST + N S HN W N S W A
Sbjct: 376 WSTHNNWSTHNNWSTYNNWSTYNNWSTYDNWSTHNNWSTHDNWSNHNNWSA 426
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWSTKFCYIRNISVHNYW 507
W+T+ N ST ST +WST N S HN W
Sbjct: 328 WSTHNNWSTYNNWSTHNNWST----YNNWSTHNNW 358
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWST--KFCYIRNISVHNYWRQSN 495
W+T N ST ST +WST + N S +N W N
Sbjct: 58 WSTYNNWSTYNNWSTYNNWSTYNNWSTYHNWSTYNNWSTHN 98
>SB_1079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWST--KFCYIRNISVHNYWRQSN 495
W+T+ N ST ST +WST + N S HN W N
Sbjct: 30 WSTHNNWSTYNNWSTHNNWSTYNNWSTYNNWSTHNNWSTYN 70
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWSTKFCYIRNISVHNYWRQSN 495
W+T+ N ST ST +WST N S HN W N
Sbjct: 60 WSTHNNWSTYNNWSTHNNWST----YNNWSTHNNWSTYN 94
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 611 WNTNRNLSTAEKCSTTFHWSTKFCYIRNISVHNYWRQSN 495
W+T+ N ST ST +W+T+ N S HN W N
Sbjct: 84 WSTHNNWSTYNNWSTHNNWNTR----NNWSTHNNWSTYN 118
>SB_21869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1123
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/113 (26%), Positives = 50/113 (44%)
Frame = -1
Query: 676 VLRVDAVYVYYXXITIKQI*LNGILIVICPPLKNVLPHFIGARNFVTSEIFRSTTIGDSQ 497
+L + AV ++ I + I + IL V+C L + + +G I S +G S
Sbjct: 921 ILCMVAVVIFTGHILLSIIVMLTILGVLC--LVVGVFYLVGWHLGAVEAISLSILVGTSV 978
Query: 496 TEAIH*CGRHLYWQIWICDSGNSNRQYRSWSHTTWTRVCHVPC*IQSCCV*TI 338
+H ++ +I DSG SN++ R W + + H+ I S V TI
Sbjct: 979 DYCVHLIDGYIIAGRFIPDSGLSNKEVRRWRAS--AAISHIGSSILSSAVTTI 1029
>SB_14700| Best HMM Match : MbeB_N (HMM E-Value=1.8)
Length = 815
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 342 PFKGEVLDGIVTQVNKVGMFAQIGPLKCFISHHSIPD 232
PF +LD ++ + + L C +SHHS+PD
Sbjct: 275 PFGRPLLDSLMEYYLNIRDIQTLAVLTCVMSHHSLPD 311
>SB_10164| Best HMM Match : Keratin_B2 (HMM E-Value=3.4)
Length = 428
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 406 SHTTWTRVCHVPC*IQ-SCCV*TIQRRSFRWYCHTSK*GWHV 284
S T W +CH PC +Q + V R+ R CH + G HV
Sbjct: 315 SRTLWAIICHAPCGLQVTHLVGYYMSRTLRATCH-APCGLHV 355
>SB_183| Best HMM Match : IBR (HMM E-Value=0.015)
Length = 228
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 265 ERSYLRKHANLIYLCDNTI*N---FSFEWSKHNSFVFNRVHDKPLSMLYETSSD 417
E +LRK +++ LC NT+ F+F ++N V + K L M ET S+
Sbjct: 104 EVQFLRKAVDVLCLCRNTLKYTYVFAFYLKRNNQSVIFEDNQKDLEMATETLSE 157
>SB_31681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -2
Query: 471 GTCTGKYGFVIAVTQIDNIGAGLIQHGQGFVMYPVKYK 358
G + K G IAV ++ I AG+ + G+G+++Y V+Y+
Sbjct: 103 GGSSVKRGDQIAVGALEGINAGIWEKGRGYLVY-VRYE 139
>SB_19401| Best HMM Match : Rop (HMM E-Value=3)
Length = 451
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 33 IVLHQFQVIVVLIPNSLQLKSRLQKCHSRQLSYQQSLIGSHPLLVLRYPLVYSYNMEDL 209
IV+ F +I L+ L++K ++ K H+ + + S +GS +LV+ + L YS DL
Sbjct: 38 IVVAAFVLITSLLMQ-LRIKVKI-KTHAGRFIFNSSHLGSEFVLVVPHVLPYSEESSDL 94
>SB_36505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = +3
Query: 36 VLHQFQVIVVLIPNSLQLKSRLQKCHSRQLSYQQSLIGSHPLLVLRYPLVYSYNMEDLH* 215
V+H ++ L P + L + H ++ ++I HP ++ +P V + + +H
Sbjct: 27 VIHLHPTVIFLHPTVIHLHPTVLNLHPTIINLHPTVIHIHPTVIHLHPTVINLHPTVIH- 85
Query: 216 GRTPYSLVLN 245
P+ V+N
Sbjct: 86 ---PHPTVIN 92
>SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61)
Length = 604
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 33 IVLHQFQVIVVLIPNSLQLKSRLQKCHSRQLSYQQSLIGSHPLLVLRYPLVYSYNMEDL 209
IV+ F +I L+ L++K ++ K H+ + + S +GS +LV+ + L YS DL
Sbjct: 251 IVVAAFVLITSLLMQ-LRIKVKI-KTHAGRFIFNSSHLGSEFVLVVPHVLPYSEESSDL 307
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,238,923
Number of Sequences: 59808
Number of extensions: 483260
Number of successful extensions: 1552
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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