Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H06
(446 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 24 0.75
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 24 0.75
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 23 1.3
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 1.3
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 1.3
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 22 3.0
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 4.0
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 7.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 7.0
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 7.0
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 20 9.3
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 23.8 bits (49), Expect = 0.75
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRA-------RPPQSGPERECVQE 259
SP E+H + RD P + ++ Q L +N+ R RP + R
Sbjct: 209 SPPEKHLRLR-RDTAPPQWYQHQPLLFTYTDDGKNQQRTGTELTKMRPKRQSSRRHRKNL 267
Query: 260 RGPCARRR 283
+ PC RR+
Sbjct: 268 KDPCRRRQ 275
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.8 bits (49), Expect = 0.75
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 358 PTTLSPTRVSCWLLTS 405
PTT+ ++CW LTS
Sbjct: 313 PTTVMSPTINCWSLTS 328
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 23.0 bits (47), Expect = 1.3
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +2
Query: 134 RDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERG 265
R+R ERH+QQ+ Q+ Q+ P + + + G
Sbjct: 77 REREEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSG 120
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.0 bits (47), Expect = 1.3
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +2
Query: 134 RDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERG 265
R+R ERH+QQ+ Q+ Q+ P + + + G
Sbjct: 228 REREEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSG 271
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.0 bits (47), Expect = 1.3
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +2
Query: 134 RDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERG 265
R+R ERH+QQ+ Q+ Q+ P + + + G
Sbjct: 287 REREEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSG 330
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 122 PTKLRDRNPSERHEQQRL 175
PTK R P+ RH Q +
Sbjct: 370 PTKTRTNLPTHRHPQDEI 387
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 4.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 313 STVRLVPSDSKREYCPTTLSPTR 381
S + P D Y P +LS TR
Sbjct: 11 SLISNTPKDMNARYLPPSLSDTR 33
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 20.6 bits (41), Expect = 7.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 96 SVAQRSAIGQRSSVTVTQ 149
S+ R AIGQRS V Q
Sbjct: 135 SIHLRGAIGQRSCQVVIQ 152
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 389 HETRVGDSVVGQYSLLE 339
HE R+ ++++G Y++LE
Sbjct: 3 HEKRLLNNLLGPYNVLE 19
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 389 HETRVGDSVVGQYSLLE 339
HE R+ ++++G Y++LE
Sbjct: 3 HEKRLLNNLLGPYNVLE 19
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 389 HETRVGDSVVGQYSLLE 339
HE R+ ++++G Y++LE
Sbjct: 3 HEKRLLNNLLGPYNVLE 19
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 389 HETRVGDSVVGQYSLLE 339
HE R+ ++++G Y++LE
Sbjct: 3 HEKRLLNNLLGPYNVLE 19
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 389 HETRVGDSVVGQYSLLE 339
HE R+ ++++G Y++LE
Sbjct: 3 HEKRLLNNLLGPYNVLE 19
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 312 LRC*CSLWIQRRRAQG 265
L C CSLW A+G
Sbjct: 218 LNCLCSLWFINCTAKG 233
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 312 LRC*CSLWIQRRRAQG 265
L C CSLW A+G
Sbjct: 218 LNCLCSLWFINCTAKG 233
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 20.2 bits (40), Expect = 9.3
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -3
Query: 270 QGPRSCTHSRSGPLCGGRALGSFRCDRSCSPLSR 169
+GPR+C R L AL S D P R
Sbjct: 432 EGPRNCIGQRFALLVSKVALASVVKDFVFDPTER 465
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,680
Number of Sequences: 336
Number of extensions: 1283
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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