Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H06
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 34 0.045
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 31 0.42
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 31 0.56
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 31 0.56
05_04_0131 + 18290201-18290650,18291474-18291626,18291950-182920... 30 0.97
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 29 2.3
09_04_0506 - 18188785-18190599 28 3.0
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 3.0
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 3.9
02_05_0288 - 27549718-27549940,27550025-27550102,27550282-275506... 28 3.9
08_02_0377 + 16481232-16481361,16482501-16482547,16482634-164827... 27 5.2
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 27 5.2
06_01_0234 - 1784498-1784770 27 5.2
03_06_0533 + 34565062-34565439 27 5.2
05_03_0233 - 10704018-10704118,10704217-10705411 27 6.9
03_06_0101 + 31653860-31654327 27 6.9
01_01_0012 + 71903-72935,73468-73981,74619-76008 27 6.9
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 27 9.1
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213... 27 9.1
03_03_0192 - 15308602-15308869,15309457-15309528,15310271-153103... 27 9.1
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 27 9.1
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 34.3 bits (75), Expect = 0.045
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 298 ASAA*STVRLVPSD-SKREYCPTTLSPTRVSCWLLTSPVWGSD 423
+S A T+ L S+ K++Y P+ T V CW LT P GSD
Sbjct: 135 SSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSD 177
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 31.1 bits (67), Expect = 0.42
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +2
Query: 104 PKERHRPTKLRDRNPSERHEQQRLSGLQERS--QRN-EPRARPPQS---GPERECVQERG 265
P+ R R R R+P R + S +ERS +RN PR P +S P+R+ V+E+
Sbjct: 30 PRRRERSPAARSRSPRRRSPVKSTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQV 89
Query: 266 PCARRR*IQSEHQQRSRQ 319
++ +S R R+
Sbjct: 90 RSPKQSWSRSPSPARKRE 107
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/69 (28%), Positives = 24/69 (34%)
Frame = +2
Query: 152 ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSRQCA*Y 331
ER E R SG R PP+ + R P RR ++S R R
Sbjct: 6 ERREHSRRSGRSRSRSPARDRGSPPRRRERSPAARSRSP-RRRSPVKSTSSHRERSPVRR 64
Query: 332 RQIPRESTV 358
PR S V
Sbjct: 65 NGSPRRSPV 73
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 30.7 bits (66), Expect = 0.56
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 343 KREYCPTTLSPTRVSCWLLTSPVWGSD 423
K++Y P+ + CW LT P +GSD
Sbjct: 128 KQKYLPSLTQFRTIGCWALTEPDYGSD 154
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 30.7 bits (66), Expect = 0.56
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQ 229
S ER + RDR+P +H + R G ERS R+ R+R P+
Sbjct: 204 SEHERRGLSHERDRSPYMQHSRSRSRGRDERS-RSRSRSRSPR 245
>05_04_0131 +
18290201-18290650,18291474-18291626,18291950-18292042,
18292285-18292313,18292702-18292795,18292941-18293153
Length = 343
Score = 29.9 bits (64), Expect = 0.97
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 116 HRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERE 247
HR T+++ + SE E R S +E+ + N+P PP + E E
Sbjct: 83 HRSTEVQPADDSEPEETSR-STTEEKKEENKPDETPPSTVTEPE 125
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 28.7 bits (61), Expect = 2.3
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +3
Query: 81 SDGSVSVAQRSAIGQ-RSSVTVTQVSAMSNNG*VGYRSDHSGMSQGRDHRRV---GQNGS 248
S GS+S + RS Q SV T+ +N RSD G S HRR G G
Sbjct: 135 SAGSLSSSSRSISRQLHRSVPKTRKDGGTNGSNARMRSDSGGNSGANVHRRADLQGPTGR 194
Query: 249 VYKSGVLAHDGVESRVSISSVVDS 320
+L H +S + +S
Sbjct: 195 FVSQSLLRHRSRNQEEPVSHLENS 218
>09_04_0506 - 18188785-18190599
Length = 604
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +2
Query: 152 ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSR 316
ER ++ SG +R + E PP PER ER R + ++R R
Sbjct: 481 ERPPEREWSGASDRRREREKDLPPPPDWPERRHRDERDAGRERERERDRDRERER 535
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 146 PSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQER 262
P RH +R +G + +R+ R R ERE ++R
Sbjct: 509 PERRHRDERDAGRERERERDRDRERERDRDRERERERDR 547
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 104 PKERHRPTKLRDRNPSERHEQQRLSGLQERS--QRN-EPRARPPQS---GPERECVQER 262
P R R R R+P R + S +ERS +RN PR P +S P+R+ V+E+
Sbjct: 243 PARRERSPAPRSRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQ 301
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPS--ERHEQQ-----RLSGLQERSQRNEPRARPP 226
SP+ R RP+ RD PS E H + R+ RSQ + R R P
Sbjct: 302 SPRHRMRPSHYRDNTPSRGEMHHHRDNTPSRVDSSPRRSQHEDFRDRSP 350
>02_05_0288 -
27549718-27549940,27550025-27550102,27550282-27550674,
27550752-27551347,27552232-27552978
Length = 678
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 439 ASXTACQTPTPATSRASTRPASVT 368
A+ AC T T AT+R++TRP T
Sbjct: 60 ATAVACTTTTTATTRSATRPRKRT 83
>08_02_0377 +
16481232-16481361,16482501-16482547,16482634-16482711,
16482826-16482896,16483005-16483086
Length = 135
Score = 27.5 bits (58), Expect = 5.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -1
Query: 404 DVKSQHETRVGDSVVGQYSLLESDGTKRTV--DYAADAHSGFNAV--VRKDPALVHTPVL 237
D++ +SV+ L+S+ + DY +G++ + V+K P LVH PV+
Sbjct: 37 DIEENTRVTAVESVMQALVFLDSEHDVNMIVSDYCMPEMTGYDLLMEVKKSPRLVHLPVI 96
Query: 236 AHSA 225
S+
Sbjct: 97 IASS 100
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Frame = +2
Query: 140 RNPSERHEQQRLSGLQERS--QR--NEPRARPPQSG--PERECVQERGPCAR 277
+ PSE + R+SG + RS QR PR PP G P R R P R
Sbjct: 122 KKPSEMRSRDRISGSRGRSYDQRYSRSPRYSPPPRGRSPYRSPSYSRSPSPR 173
>06_01_0234 - 1784498-1784770
Length = 90
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 140 RNPSERHEQQRLSGLQERSQRNEPRARPP 226
R PSE+ ++ S +R +R PR PP
Sbjct: 41 RQPSEQQQRGEGSSPSQREERRRPREAPP 69
>03_06_0533 + 34565062-34565439
Length = 125
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -3
Query: 360 RTVLSLGI*RY*AHCRLRC*CSLWIQRRRAQGPRSCTHSRSGPLCGGRA 214
R + G+ R A RL C W+ RRR R R G L GG A
Sbjct: 66 RRAAATGLRRLRARLRL---CFAWVSRRRNIHRRGARFGRYGRLSGGAA 111
>05_03_0233 - 10704018-10704118,10704217-10705411
Length = 431
Score = 27.1 bits (57), Expect = 6.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 318 CRLRC*CSLWIQR 280
C+LRC C LW++R
Sbjct: 40 CQLRCVCKLWLER 52
>03_06_0101 + 31653860-31654327
Length = 155
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +2
Query: 155 RHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSRQC 322
R QR + QER R R++ SG + E PC H RS+ C
Sbjct: 81 RAASQRRAAEQEREARAVARSQSMASGISMARIDEDAPCEEFGDAGVMHYPRSQSC 136
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 RHRPTKLRDRNPSERHEQQRLS-GLQERSQRNEPRARPPQSGPERECVQERGPCARRR*I 289
RH+ + D +RH ++ LS RS R R+ G + ++ R R
Sbjct: 610 RHKKSSRSDSRSPKRHREESLSPSKSRRSARAGSRSPGQHKGSKLSPTRDHHSSRRSRRS 669
Query: 290 QSEHQQRSR 316
+S Q+++R
Sbjct: 670 RSRSQEKNR 678
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 26.6 bits (56), Expect = 9.1
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPEREC--VQERGPCARR 280
+E+ + ++ ER Q+RL +E QR E + ERE +ER AR+
Sbjct: 506 QEQDDEARFNTQDHEERDRQERLEREREMRQREEKEREQRRLEEERELEKQRERERAARQ 565
Query: 281 R*IQSEHQQRSRQCA 325
++ + R R A
Sbjct: 566 AVERATKEARERAAA 580
>05_07_0280 -
28920864-28920971,28921076-28921175,28921267-28921394,
28922013-28922180,28922280-28922395,28922584-28922736,
28922904-28923047,28923401-28924133
Length = 549
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQE 259
SP +H R P + + Q Q RSQ P PQ P++ ++
Sbjct: 21 SPHHKHHHHHQTTRAPKPKPKPQPPPPQQPRSQPPPPPRHQPQQAPQQAAAED 73
>03_03_0192 -
15308602-15308869,15309457-15309528,15310271-15310337,
15310449-15310528,15310636-15310714,15310815-15310890
Length = 213
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRL-SGLQERSQRNEPRARPPQSGPERECVQERGPCAR 277
SPK R+R RDR + + + Q+R R R+R + ERE QE+G R
Sbjct: 121 SPKRRYR-ADYRDRGYRDDYRDRHYRDDYQDREYR---RSRSIERY-ERERYQEKGYRRR 175
Query: 278 RR*IQSEHQQRSRQ 319
R I ++ +R R+
Sbjct: 176 SRSISPDYDRRHRK 189
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 113 RHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR 283
R R + RDR+ E+ ++ +ER R+ + + + ERE ++R +R R
Sbjct: 90 RERRDRDRDRDRDEKDREKERDKDKERRSRDREKEKEKEKEREREREKDRERRSRSR 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,861,417
Number of Sequences: 37544
Number of extensions: 181464
Number of successful extensions: 834
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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