Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H06
(446 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 31 0.43
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 30 0.76
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 30 1.0
SB_52412| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 29 1.8
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 29 1.8
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 29 1.8
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 1.8
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 29 2.3
SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014) 28 3.1
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 28 4.0
SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96) 28 4.0
SB_45788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_21618| Best HMM Match : Yip1 (HMM E-Value=1.1) 28 4.0
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 27 5.3
SB_34735| Best HMM Match : NUDIX (HMM E-Value=6.1) 27 5.3
SB_31651| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 27 5.3
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 27 5.3
SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1) 27 5.3
SB_1355| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87) 27 5.3
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 27 5.3
SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 27 5.3
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18) 27 7.1
SB_48266| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_12095| Best HMM Match : Vicilin_N (HMM E-Value=0.083) 27 7.1
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_35402| Best HMM Match : Collagen (HMM E-Value=0.39) 27 7.1
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 27 7.1
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 32.7 bits (71), Expect = 0.14
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQE---RSQRNEPRARPPQSGPEREC---VQERGP 268
+ ++ K R+R ER +QQ+L +E R Q+ E + R + ++ QER
Sbjct: 177 RSQNEERKRREREQKEREKQQKLDMEKEERRRRQQEEEKKRREEEEKRKKVEKEKQEREK 236
Query: 269 CARRR*IQSEHQQRSRQCA*YRQIP 343
A++ + + QQR+ Q R+IP
Sbjct: 237 AAKKNIKRQQQQQRTDQQQYPREIP 261
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 31.1 bits (67), Expect = 0.43
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRAR 220
+ER R +K RDR+ R +R S ER R + R+R
Sbjct: 33 RERRRRSKSRDRDSRSRTSSRRRSRSSERRHRKDDRSR 70
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 31.1 bits (67), Expect = 0.43
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRAR 220
+ER R +K RDR+ R +R S ER R + R+R
Sbjct: 1603 RERRRRSKSRDRDSRSRTSSRRRSRSSERRHRKDDRSR 1640
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.1 bits (67), Expect = 0.43
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 113 RHRPTKLRDRNPS--ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR* 286
R R TK + ++PS R + R S ER R R+R P+S R + RRR
Sbjct: 312 RERNTKRKSKSPSLERRRSRARRSRSIERRDRRRSRSRSPRSSLGRSRRRSSSRNRRRRR 371
Query: 287 IQSEHQQRSR-QCA*YRQIPREST 355
+S+ ++ QC +++ R +
Sbjct: 372 SRSKSPLNTKSQCEKEQRVSRSKS 395
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 30.7 bits (66), Expect = 0.57
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 137 DRNPSERHEQQRLSG-LQERSQRNEPRARPPQSGPERECVQERGPCA 274
D PS E G +Q + +R R+ PP++G + + + ERGP A
Sbjct: 1340 DSEPSHAKESASGRGSVQAKKRRTSSRSVPPRAGEDPKAMIERGPDA 1386
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 30.3 bits (65), Expect = 0.76
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSE--RHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARR 280
K R R + R R+P + R ++R ++RS+ R+R P+ G + R P RR
Sbjct: 191 KSRSRSPRKRSRSPRKMLRSPRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRSRSP--RR 248
Query: 281 R*IQSEHQQRSR 316
H++RSR
Sbjct: 249 N--SQRHKERSR 258
Score = 27.5 bits (58), Expect = 5.3
Identities = 20/84 (23%), Positives = 34/84 (40%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARR 280
SP++R R + R R+P +R R + + PR R Q ER +R
Sbjct: 210 SPRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRSRSPR-RNSQRHKERSRYHRSRSRSRH 268
Query: 281 R*IQSEHQQRSRQCA*YRQIPRES 352
R +S + +++ R+S
Sbjct: 269 RRSRSNSPSMRKSDRKFKKSQRKS 292
Score = 26.6 bits (56), Expect = 9.3
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEP--RARPPQSGPERECVQERGPCA 274
SP++ R + R R P +R R R + P R+R P+ +R +ER
Sbjct: 203 SPRKMLRSPRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRSRSPRRNSQRH--KERSRYH 260
Query: 275 RRR*IQSEHQQRSR 316
R R +S H +RSR
Sbjct: 261 RSR-SRSRH-RRSR 272
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 107 KERHRPTKLRDRNPS-ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR 283
+E + K ++R ER +QR +E R R+ P R + + P +RRR
Sbjct: 997 EEEEKKEKEQEREKERERLREQREKEREETRMRARDRSGDRARSPPRGRARSKSPVSRRR 1056
Query: 284 *IQSEHQQRSR 316
S + RSR
Sbjct: 1057 ASPSRSRSRSR 1067
>SB_52412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 29.9 bits (64), Expect = 1.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 143 NPSERHEQQRLSGLQERSQRNEPRARPPQSGP 238
NPS++ +++ + E +R EP P++GP
Sbjct: 397 NPSQKKDEEEMEEEDEEEEREEPDEPEPETGP 428
>SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 149 SERHEQQRLSGLQERSQRNEPRARPPQSGPER 244
SER ++R SGLQERS+ R+R P+ R
Sbjct: 203 SERTRKRRHSGLQERSRDRIARSRSPRRSRAR 234
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 110 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*I 289
ER RP+ L R+ SER R+S RS + + P R +R AR R
Sbjct: 47 ERKRPSSL-GRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPSRRSSDDRSTDARDRRD 105
Query: 290 QSEHQQRSRQ 319
+ R R+
Sbjct: 106 RRRSSSRERR 115
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQ-SGPERECVQER 262
+++ R + + R P +R +QQ+ Q++SQ+ + + +P Q S ++E Q R
Sbjct: 82 QQQQRRQQQQKRQPQQRRQQQQQRQPQQKSQQQQQQQQPQQPSHGQQEPHQRR 134
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 29.1 bits (62), Expect = 1.8
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR 283
+ER RP +RDR E +R +R+ R RAR + ERE V+ER P R R
Sbjct: 524 QERDRP--VRDRETYRDRELER-----DRADRERERARDTRRDRERERVRER-PRERER 574
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERG 265
SP+ R R R R+P ++ R G ++R R+ R R G +R+ +++G
Sbjct: 448 SPRRRSRSPGHRSRSPRRGRDRDRDRG-RDRRDRDRDRDRDRDRGRDRDRDKDKG 501
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.7 bits (61), Expect = 2.3
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = +2
Query: 110 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*I 289
ER R K R+R E++R + +R R R + ERE +ER R
Sbjct: 205 ERQRE-KERERERERERERERERERERERERERERERERERERERERERERERERERERE 263
Query: 290 QSEHQQRSRQCA*YRQIPREST 355
+ ++R R+ Y + ST
Sbjct: 264 RERERERERERKRYACVSETST 285
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 28.7 bits (61), Expect = 2.3
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 110 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*I 289
ER RP+ L R+ SER R+S RS + + P R +R AR R
Sbjct: 47 ERKRPSSL-GRDSSERRPSVRVSSDNSRSPPHRRDSSRRSHSPSRRSSDDRSTDARDRRD 105
Query: 290 QSEHQQRSRQ 319
+ R R+
Sbjct: 106 RRRSSSRERR 115
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 28.7 bits (61), Expect = 2.3
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 104 PKERHRPTKLRDRNPS----ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPC 271
PKE R R R PS +RHE +R G E +R + R ER+ + R
Sbjct: 1595 PKEEPRQGTERRREPSLRHDDRHEDRRSEGRPEDYERRDEERR---REAERKGERPREEF 1651
Query: 272 ARRR*IQSEHQQRS-RQCA*YRQIPREST 355
R+ S+ QRS R+ Y + RE +
Sbjct: 1652 ERKSERSSQRSQRSLREGERYYEERREES 1680
>SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARR 280
S K T++R + S ++ G +ERS +E A+P + E +E+ +
Sbjct: 464 SNKSSSNGTQMRSNSGSLSQNWRKQEGRKERSGSDETEAKPSEVAAEETVAEEKVNSEEK 523
Query: 281 R*IQSEHQ 304
++S Q
Sbjct: 524 SSVESAEQ 531
>SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014)
Length = 323
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 131 LRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPER 244
L++RN S QR R RN+P+ RPP S P +
Sbjct: 80 LKERNGSSLKSLQR-----NRQLRNQPQRRPPNSQPRK 112
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 110 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPE 241
E H R R + QQR+ L+ R Q ++ + RP P+
Sbjct: 994 EEHVTELNRQREEKDTSHQQRVKELERRKQHHQSQLRPTLGHPQ 1037
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 110 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPE 241
E H R R + QQR+ L+ R Q ++ + RP P+
Sbjct: 1130 EEHVTELNRQREEKDTSHQQRVKELERRKQHHQSQLRPTLGHPQ 1173
>SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 107 KERHRPTKL-RDRNPSERHEQQRLSGLQER-SQRNEPRARPPQSGPERECVQERG 265
K +H +L R+R ER E++ L LQ R + +E AR ERE +E G
Sbjct: 740 KRKHEEARLQREREARER-EERELRELQRREEEEHESLAREEGERAERESQREAG 793
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/64 (20%), Positives = 27/64 (42%)
Frame = +2
Query: 128 KLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQ 307
+L + P E + S + ++ RP + +E QE+ +R + H++
Sbjct: 425 RLEEERPEEERTHEERSHKERSQEKRSHEKRPHEERSHKERSQEKRSHEKRPHEERSHEE 484
Query: 308 RSRQ 319
RS +
Sbjct: 485 RSEE 488
>SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96)
Length = 772
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 162 SNNG*VGYRSDHSGMSQGRDHRRVGQNGSVYKSGVLAHDGVESRVSISSVVDSALS 329
S N +G+ S QG DH G+NG + + G LA+ G+ S SI ++ L+
Sbjct: 456 SFNSALGHLSSSKINLQGNDHANYGENG-INELGQLANTGL-SDSSIQRLIGQLLA 509
>SB_45788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.9 bits (59), Expect = 4.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = -3
Query: 291 WIQRRRAQGPRSCTHSRSGPLCGGRALGSF--RCD-RSCSPLSR-CCSWRSLGLRSRSFV 124
W +R QG S G GGR G F CD RS +R C G R
Sbjct: 82 WRERDHGQGGSRRNESSHGGYRGGRNQGGFGGSCDERSYRDGTRVSCDDGGFGSRGNKGA 141
Query: 123 GLWRS 109
G W+S
Sbjct: 142 GRWKS 146
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -1
Query: 443 TSFSYGVSDPHTGDVKSQHETRVGDSVVGQYSLLES 336
TS + +SD H+G + + + ++GDS + + S + S
Sbjct: 2740 TSIAEELSDRHSGSSEVEEDIKIGDSSISEASEIRS 2775
>SB_21618| Best HMM Match : Yip1 (HMM E-Value=1.1)
Length = 338
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 204 FRCDRSCSP-LSR-CCSWRSLGLRSR 133
F CDR+C+P SR CC + L RSR
Sbjct: 268 FACDRACAPTCSRACCRSQYLAARSR 293
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Frame = +2
Query: 104 PKERHRP-----TKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERE 247
P+ R RP + RD P R + R G +ER PR+ QS + E
Sbjct: 615 PRSRERPRSRERSDRRDERPQRRGSRGRSPGRREREGERRPRSAERQSRRQDE 667
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 443 TSFSYGVSDPHTGDVKSQHETRVGDSVVGQYSLLESDGTKRTVDYA 306
T + G + T D S ++ GDSV +Y+ L D T++ DYA
Sbjct: 1276 TKVTRGNNASVTLDASSSYDPDTGDSVGLRYTWLCRDRTEKLPDYA 1321
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARR 280
SP++R + +P +R R + R + N PR R P S +R + R P + R
Sbjct: 276 SPRQRSNSPRRVPVSPRQRSNSPRRVPVSPRQRSNSPR-RVPVSPRQRPNLPRRVPLSSR 334
Query: 281 R 283
+
Sbjct: 335 Q 335
>SB_34735| Best HMM Match : NUDIX (HMM E-Value=6.1)
Length = 431
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 219 RALGSFRCDRSCSPLSRCCS 160
R L SFRC +S S CCS
Sbjct: 310 RCLNSFRCKQSLEKHSECCS 329
>SB_31651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 827
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 113 APLGYAHGAIATPLAHAGPLAYSAPLAHDVAYGAHGI 3
AP G A+A + H AY A +AHD +YG +G+
Sbjct: 177 APDGEQSKAMADIIEHF-KWAYVAAIAHDGSYGQYGV 212
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHE--QQRLSGLQERSQRNEPRARPPQSGPERE 247
+ER R + DR P +RHE ++G SQ + R R GP+RE
Sbjct: 522 REREREGRHMDRGPRDRHEGDYTEVTGGSRWSQGDRDRDR----GPDRE 566
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 134 RDRNPSERHEQQRLSGLQ---ERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQ 304
RDRN + ++++R + E+ +R++ R + + ERE +ER R +S H+
Sbjct: 613 RDRNREKENDREREKEREKEKEKEERDKEREKEKEKEKEREKEKEREREKERDRDKSSHK 672
Query: 305 QR 310
+R
Sbjct: 673 KR 674
>SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1)
Length = 256
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 137 DRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSR 316
DR H + R ++R + + P P+R+ +ER AR R + RSR
Sbjct: 155 DRQRPSPHRRSRPRNRKDRQLDKKTKTLPNSYAPKRDKPRERKKVARDRSRSPRSRSRSR 214
Query: 317 Q 319
+
Sbjct: 215 E 215
>SB_1355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 219 RALGSFRCDRSCSPLSRCCS 160
R L SFRC +S S CCS
Sbjct: 183 RCLNSFRCKQSLEKHSECCS 202
>SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87)
Length = 212
Score = 27.5 bits (58), Expect = 5.3
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 137 DRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSR 316
+RN + RH +LS Q+R +R+ R PP P R +RG R SE S+
Sbjct: 139 ERNHT-RHVSYQLSNYQQRVRRSSDREAPP---PPRRRSSDRGMTTPTRRRSSEKGPASQ 194
Query: 317 Q 319
+
Sbjct: 195 K 195
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 264 PRSCTHSRSGPLCGGRALG--SFRCDRSCSPLSRCCSWRSLGLRSRSFVG 121
P C H + GP C +++G F C P C + +G +SF G
Sbjct: 898 PFPCPHYQGGPACECKSMGYTPFACPH--YPGGPACKCQCMGQHQQSFQG 945
>SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +2
Query: 134 RDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRS 313
+ + P + +QQ+ L+++ Q+ +PR + Q P + Q++ P +++ Q QQ+
Sbjct: 69 QQQQPRLQQQQQQQPRLKQQQQQ-QPRLKQQQQQPRLKQQQQQQPRLKQQQQQPRLQQQQ 127
Query: 314 RQ 319
+Q
Sbjct: 128 QQ 129
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 161 EQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSR 316
+QQR L+ Q +E R P E V + R+R + +HQ+ S+
Sbjct: 324 QQQRRRELEREEQGSEQRELDTSGSPAHELVHKLSSKKRKR-VSGDHQKPSK 374
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 445 TPASXTACQTPTPATSRASTRPASVTA 365
TP+ T+ +P A+ ++STRP TA
Sbjct: 189 TPSGSTSPTSPNNASPQSSTRPGETTA 215
>SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18)
Length = 1044
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 258 SCTHSRSGPLCGGRALGSFRCDRSCS 181
+C+HS G LCG + G +R C+
Sbjct: 293 TCSHSYEGVLCGACSRGYYRMFSGCN 318
>SB_48266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/91 (26%), Positives = 41/91 (45%)
Frame = +3
Query: 87 GSVSVAQRSAIGQRSSVTVTQVSAMSNNG*VGYRSDHSGMSQGRDHRRVGQNGSVYKSGV 266
GS+S SAI ++ S++ SA+S G + R + +G R + + + +
Sbjct: 513 GSISSRLCSAISRQGSISSRLCSAISRQGSISSRLSSAISRRGSMSSRSSSDVGI-QGSI 571
Query: 267 LAHDGVESRVSISSVVDSALSTVRFQERVLS 359
L+ E +V S+ S S V QE + S
Sbjct: 572 LSRPNSEFKVQ-GSISSSPSSDVGGQEPISS 601
>SB_12095| Best HMM Match : Vicilin_N (HMM E-Value=0.083)
Length = 501
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 113 RHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCAR 277
R R L++ + E+Q + +QER++++ RAR + +R+ ++E C R
Sbjct: 302 RRRLKALQEAEQALEEERQCRTKMQERAEQSVERAREEMTDWKRQ-IEELSGCCR 355
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRL-SGLQERSQRNEPRARPPQSGPERECVQER 262
SP R ++ R R+P RH + R + + RS+ + P + + ++E ++R
Sbjct: 250 SPHHRSHRSRSRSRSPRRRHSRSRSPTHRRHRSRSHSPEKKKHKKKEKKEKDEKR 304
>SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 173 LSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSRQ 319
+S Q+RS+ + P R P R + R P RR +S RQ
Sbjct: 122 ISYFQQRSKSSSPSRRARSRSPGRRRSRSRSPARRRTAARSSPSPPKRQ 170
>SB_35402| Best HMM Match : Collagen (HMM E-Value=0.39)
Length = 657
Score = 27.1 bits (57), Expect = 7.1
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 93 VSVAQRSAIGQRSSV---TVTQVSAMSNNG*VGYRSDHSGMSQGRDHRRVGQNGSVYKSG 263
++ AQ ++ GQ ++ QVS M+ G G + M QG ++GQ G + + G
Sbjct: 182 IATAQVNSGGQSATALGSNSAQVSNMAKGGLAGQGGQMNQMRQGGQMNQMGQGGQMNQMG 241
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGP 268
+ R +R R R E+ R+ +ER ++ E + R + +RE E GP
Sbjct: 1210 RRRDEDEAIRRREEMRRREEDRIREEEERRKQEELKLRLQEEARQRERTDE-GP 1262
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQER 262
K+R K RD++ + S +R +R+E R + P+S ERE ++R
Sbjct: 231 KKREEEKKDRDKDKDREDRKSSSSRESKRERRSEEREKRPRS-RERERSRDR 281
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 107 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQER 262
K+R + DR S E +R +ER +R R R ER +ER
Sbjct: 238 KDRDKDKDREDRKSSSSRESKRERRSEEREKRPRSRERERSRDRERSRDRER 289
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.1 bits (57), Expect = 7.1
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = +2
Query: 101 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARR 280
SP+ R R D +P R E R + R A PP+ R+ + P RR
Sbjct: 832 SPRRRRRSASGSDSSPHRRSESPRDRRRRSPEHRRRREASPPR----RDRKRYDSPPRRR 887
Query: 281 R*IQSEHQQRSRQ 319
R S +R R+
Sbjct: 888 RRSPSPPPRRRRR 900
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 219 RALGSFRCDRSCSPLSRCC 163
R L SFRC++S S CC
Sbjct: 564 RCLNSFRCEQSLEKHSECC 582
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 110 PLGYAHGAIATPLAHAGPLAYSAPLAHDVAYGAHGI 3
P G A+A + H +Y A +AHD +YG HG+
Sbjct: 182 PDGEQSKAMADIIDHFN-WSYVAAVAHDGSYGQHGV 216
>SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 119 RPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQ-- 292
RPT+ + ++ +QQ+ Q+ +Q N+ + + Q + Q++ P ++ Q
Sbjct: 507 RPTQAPNSGQQQQQQQQQQENNQQYNQGNQQQQQDSQQNRQPGGQQQQQPEQQQTNSQLQ 566
Query: 293 -SEHQQRSRQCA*YRQIPREST 355
++ Q Q Y Q P S+
Sbjct: 567 SQQYNQNQEQAPLYSQYPTLSS 588
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 128 KLRDRNPSERHEQQRLSGLQERSQRNE 208
+L + + SE +E+QR LQE+ +RN+
Sbjct: 1626 RLEEASRSEEYERQRQLELQEKERRNK 1652
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/60 (20%), Positives = 32/60 (53%)
Frame = +2
Query: 140 RNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQRSRQ 319
+ ++ +QQ+ Q++ Q+ + + PQ +++ QE+ +++ Q + QQ+ +Q
Sbjct: 16 KQQQQQQQQQQQQQQQQQQQQQQQQQPQPQQQQQQQQEQEQQQQQQQQQQQQQQQQQQQQ 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,087,340
Number of Sequences: 59808
Number of extensions: 203475
Number of successful extensions: 1175
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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