BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_H05 (670 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37 SB_56015| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 2.0 SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 2.6 SB_10658| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 29 3.4 SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0 SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 >SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 137 Score = 32.3 bits (70), Expect = 0.37 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Frame = -3 Query: 350 YNLEGDKYELERAIEI---RKMEISDLNSQVNDLRGKF--VKPTLKKVSKYENKFAKLQK 186 Y ++ D +LER +EI + ++ L + L+ + ++ +KVSKYE+ +K Sbjct: 49 YRIKAD--QLERDVEILNEKNEQLQGLAEESQQLKDEMDVLRHMQEKVSKYESTIDMYKK 106 Query: 185 KAAEF-NFRNQLKVVKKKEFT 126 K E + R Q+K +++K T Sbjct: 107 KLEELSDMRKQMKAMEEKNVT 127 >SB_56015| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 136 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = -3 Query: 347 NLEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFN 168 ++ K L IRK + + NS+ + K ++P L +SK E KL KK FN Sbjct: 49 HIRKSKNTLANPKHIRKFQNTFANSKTHSQIQKHIRPRLPPISK-EGSVTKLPKKTLVFN 107 >SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) Length = 3071 Score = 29.9 bits (64), Expect = 2.0 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = -3 Query: 335 DKYELERAIEIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA-AEFNFRN 159 D+ +L + IE+ +++ N ++N +R +KV + +NK AKLQ + A R+ Sbjct: 474 DRDDLRKEIEVISTKLTTTNEKLN-IRENERADLERKVMESDNKLAKLQSQLDAALTARD 532 Query: 158 QLK 150 +LK Sbjct: 533 RLK 535 >SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) Length = 2122 Score = 29.5 bits (63), Expect = 2.6 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -3 Query: 359 HRIYNLEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYEN-KFAKLQKK 183 H I L+ E E+ IE+RK ++ + + +L+ + + L+K K +N + ++ K Sbjct: 415 HEIAELKEKLQESEKVIELRKKDLGKKDKTIEELKERII--VLEKSLKDKNDEIFGIEGK 472 Query: 182 AAEFNFRN 159 AE +N Sbjct: 473 IAELEAKN 480 >SB_10658| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 78 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%) Frame = -3 Query: 224 VSKYENKFAKLQKKAAEFNFR-NQLK 150 V KYEN+ LQ+K EF+F+ N++K Sbjct: 13 VEKYENEVTVLQEKIKEFDFKTNEIK 38 >SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) Length = 2040 Score = 29.1 bits (62), Expect = 3.4 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = -3 Query: 356 RIYNLEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAA 177 +++NL ++L + ++ DLN++VNDL K V KV K L K Sbjct: 303 KLHNLNTKLHDLNTKVHDLNTKLHDLNTKVNDLNTK-VHDFNTKVHDLNTKVHDLNTKLH 361 Query: 176 EFN 168 + N Sbjct: 362 DLN 364 Score = 28.7 bits (61), Expect = 4.5 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -3 Query: 356 RIYNLEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVKPTLK--KVSKYENKFAKLQKK 183 ++++L ++L + ++ DLN++VNDL K K + KV+ K L K Sbjct: 352 KVHDLNTKLHDLNTKVHDLNAKVHDLNTKVNDLNTKNTKVNDQNTKVNDLNTKVHDLNAK 411 Query: 182 AAEFN 168 + N Sbjct: 412 VHDLN 416 >SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2193 Score = 28.3 bits (60), Expect = 6.0 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%) Frame = -3 Query: 335 DKYELE-RAIEIR---KMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAA 177 DK ELE + IE+ K+++++L ++ NDLR VK KYE + +L++ A Sbjct: 1962 DKNELENKIIELTNQYKLKLAELENE-NDLRNSRVKNLENLCKKYEKQIQELREHNA 2017 >SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 232 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 293 EISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 183 EI +V++L+G+F K + + + + F KLQ K Sbjct: 112 EIEGFFDEVHELKGQFNKYKMNTIPRLQEVFKKLQSK 148 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,465,687 Number of Sequences: 59808 Number of extensions: 206172 Number of successful extensions: 551 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 551 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1729817375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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