Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H04
(714 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095084-1|AAM11412.1| 133|Drosophila melanogaster RE49709p pro... 185 5e-47
AY071722-1|AAL49344.1| 133|Drosophila melanogaster RH38554p pro... 185 5e-47
AE014297-4356|AAF56878.1| 133|Drosophila melanogaster CG1458-PA... 185 5e-47
X91245-1|CAA62627.1| 495|Drosophila melanogaster muscle LIM pro... 33 0.51
BT003202-1|AAO24957.1| 495|Drosophila melanogaster RE40142p pro... 33 0.51
AF090832-1|AAC61591.1| 495|Drosophila melanogaster muscle LIM p... 33 0.51
AE014297-561|AAF54064.1| 495|Drosophila melanogaster CG1019-PB,... 33 0.51
AE014297-560|AAF54063.1| 495|Drosophila melanogaster CG1019-PA,... 33 0.51
AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p pro... 29 4.7
AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein... 29 4.7
AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA ... 29 4.7
AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA... 29 4.7
>AY095084-1|AAM11412.1| 133|Drosophila melanogaster RE49709p
protein.
Length = 133
Score = 185 bits (451), Expect = 5e-47
Identities = 80/129 (62%), Positives = 99/129 (76%), Gaps = 5/129 (3%)
Frame = -3
Query: 712 VXNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKAREA 533
+ +LVK ++PNYLSSLP+PDS+GGWF+L KDWLALIPPTVVV G+ Y +Y A A
Sbjct: 4 ISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPAARA 63
Query: 532 G-----SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETG 368
SG+ N IRK+ KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TG
Sbjct: 64 SCAAKNSGRCNNHIRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTG 123
Query: 367 DNTGPVVVR 341
DN GP+V++
Sbjct: 124 DNVGPIVIK 132
>AY071722-1|AAL49344.1| 133|Drosophila melanogaster RH38554p
protein.
Length = 133
Score = 185 bits (451), Expect = 5e-47
Identities = 80/129 (62%), Positives = 99/129 (76%), Gaps = 5/129 (3%)
Frame = -3
Query: 712 VXNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKAREA 533
+ +LVK ++PNYLSSLP+PDS+GGWF+L KDWLALIPPTVVV G+ Y +Y A A
Sbjct: 4 ISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPAARA 63
Query: 532 G-----SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETG 368
SG+ N IRK+ KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TG
Sbjct: 64 SCAAKNSGRCNNHIRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTG 123
Query: 367 DNTGPVVVR 341
DN GP+V++
Sbjct: 124 DNVGPIVIK 132
>AE014297-4356|AAF56878.1| 133|Drosophila melanogaster CG1458-PA
protein.
Length = 133
Score = 185 bits (451), Expect = 5e-47
Identities = 80/129 (62%), Positives = 99/129 (76%), Gaps = 5/129 (3%)
Frame = -3
Query: 712 VXNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKAREA 533
+ +LVK ++PNYLSSLP+PDS+GGWF+L KDWLALIPPTVVV G+ Y +Y A A
Sbjct: 4 ISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPAARA 63
Query: 532 G-----SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETG 368
SG+ N IRK+ KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TG
Sbjct: 64 SCAAKNSGRCNNHIRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTG 123
Query: 367 DNTGPVVVR 341
DN GP+V++
Sbjct: 124 DNVGPIVIK 132
>X91245-1|CAA62627.1| 495|Drosophila melanogaster muscle LIM
protein protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.51
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -3
Query: 583 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 404
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 403 DGSHG 389
G HG
Sbjct: 280 -GPHG 283
>BT003202-1|AAO24957.1| 495|Drosophila melanogaster RE40142p
protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.51
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -3
Query: 583 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 404
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 403 DGSHG 389
G HG
Sbjct: 280 -GPHG 283
>AF090832-1|AAC61591.1| 495|Drosophila melanogaster muscle LIM
protein at 84B protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.51
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -3
Query: 583 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 404
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 403 DGSHG 389
G HG
Sbjct: 280 -GPHG 283
>AE014297-561|AAF54064.1| 495|Drosophila melanogaster CG1019-PB,
isoform B protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.51
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -3
Query: 583 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 404
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 403 DGSHG 389
G HG
Sbjct: 280 -GPHG 283
>AE014297-560|AAF54063.1| 495|Drosophila melanogaster CG1019-PA,
isoform A protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.51
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -3
Query: 583 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 404
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 403 DGSHG 389
G HG
Sbjct: 280 -GPHG 283
>AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p
protein.
Length = 939
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 578 YILLLLPDNKKSQRSWQWSNKPLYQEG 498
Y+ LLL D+ W W +P+Y++G
Sbjct: 802 YVQLLLNDHDHEVDMWCWGGEPIYRDG 828
>AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein
protein.
Length = 1641
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 437 AKGCLLSYILNVNKVH-NFINVLPDTRVYLTTASFSGFFYCLVRVVRYT 580
A G L YIL +++ N I + D YLT SF YC++ + T
Sbjct: 636 APGLLFDYILLQIQIYDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLT 684
>AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA
protein.
Length = 939
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 578 YILLLLPDNKKSQRSWQWSNKPLYQEG 498
Y+ LLL D+ W W +P+Y++G
Sbjct: 802 YVQLLLNDHDHEVDMWCWGGEPIYRDG 828
>AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA
protein.
Length = 1641
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 437 AKGCLLSYILNVNKVH-NFINVLPDTRVYLTTASFSGFFYCLVRVVRYT 580
A G L YIL +++ N I + D YLT SF YC++ + T
Sbjct: 636 APGLLFDYILLQIQIYDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLT 684
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,550,523
Number of Sequences: 53049
Number of extensions: 577548
Number of successful extensions: 1507
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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