Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H04
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical p... 101 4e-22
Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical p... 101 4e-22
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 101 4e-22
Z34802-9|CAB54281.3| 160|Caenorhabditis elegans Hypothetical pr... 34 0.088
U80839-8|AAB37914.1| 238|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 31 1.1
Z93397-5|CAD89745.1| 375|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81595-8|CAB54305.1| 345|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 28 7.6
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 28 7.6
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 28 7.6
>Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical
protein W02B12.15b protein.
Length = 134
Score = 101 bits (243), Expect = 4e-22
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = -3
Query: 529 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 350
S + N I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68 SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127
Query: 349 VVR 341
+V+
Sbjct: 128 IVK 130
>Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical
protein W02B12.15a protein.
Length = 103
Score = 101 bits (243), Expect = 4e-22
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = -3
Query: 529 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 350
S + N I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 37 SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 96
Query: 349 VVR 341
+V+
Sbjct: 97 IVK 99
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 101 bits (243), Expect = 4e-22
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = -3
Query: 529 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 350
S + N I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68 SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127
Query: 349 VVR 341
+V+
Sbjct: 128 IVK 130
>Z34802-9|CAB54281.3| 160|Caenorhabditis elegans Hypothetical
protein M88.7 protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3
Query: 490 KVVDFIDIEDITEKASLCRCWRSKNWPYCDGSH 392
K V FI +D+T LC C ++ N P+CDGSH
Sbjct: 116 KPVRFIPDKDMT--VWLCNCKQTNNRPFCDGSH 146
>U80839-8|AAB37914.1| 238|Caenorhabditis elegans Hypothetical
protein ZC204.10 protein.
Length = 238
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 225 LRKCLKRNALYNIISVLFISYKT 157
LRKCLKR ++ +IS+ F+S KT
Sbjct: 16 LRKCLKRMSVAQLISISFLSKKT 38
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 213 protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 449 LLSYILN-VNKVHNFINVLPDTRVYLTTASFSGFFYCLV 562
+LSY+L+ V NFI + D+ YLT+ F YC++
Sbjct: 560 VLSYLLSQVQTFDNFIGPVVDSLRYLTSLEFDVLTYCII 598
>Z93397-5|CAD89745.1| 375|Caenorhabditis elegans Hypothetical
protein ZC482.8 protein.
Length = 375
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 467 NVNKVHNFINVLPD-TRVYLTTASFSGFFYCLVRVVRYT 580
N++K + VL D T+ ASFSGFF LV +V T
Sbjct: 32 NLHKHFELVTVLTDVTKQLYDIASFSGFFLNLVHLVILT 70
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 690 PFPTICRACRFQILLADGFVLEL 622
P+P C++CRFQ L G LE+
Sbjct: 65 PYPLKCQSCRFQRCLDAGMYLEV 87
>Z81595-8|CAB54305.1| 345|Caenorhabditis elegans Hypothetical
protein T22H2.6b protein.
Length = 345
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 322 IQINSKCSFQKNYVKTNYCIVLFKIKHF 239
I NSK +KN V+ +CI+ F IK+F
Sbjct: 6 INQNSKHITKKNDVRIFFCILYFNIKYF 33
>Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical
protein T22H2.6a protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 322 IQINSKCSFQKNYVKTNYCIVLFKIKHF 239
I NSK +KN V+ +CI+ F IK+F
Sbjct: 6 INQNSKHITKKNDVRIFFCILYFNIKYF 33
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 75 HESLRLMKKTCNNRW 31
HESL+L CNN+W
Sbjct: 245 HESLKLFDSICNNKW 259
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 75 HESLRLMKKTCNNRW 31
HESL+L CNN+W
Sbjct: 245 HESLKLFDSICNNKW 259
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 75 HESLRLMKKTCNNRW 31
HESL+L CNN+W
Sbjct: 245 HESLKLFDSICNNKW 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,866,087
Number of Sequences: 27780
Number of extensions: 304852
Number of successful extensions: 815
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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