Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H02
(744 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25870.1 68418.m03069 hypothetical protein 38 0.005
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 37 0.012
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 36 0.037
At1g45976.1 68414.m05206 expressed protein 34 0.087
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 33 0.20
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 33 0.20
At3g58940.1 68416.m06568 F-box family protein contains F-box dom... 32 0.35
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 32 0.35
At3g28770.1 68416.m03591 expressed protein 32 0.46
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 0.61
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 31 0.81
At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18) 31 0.81
At2g41960.1 68415.m05191 expressed protein 31 0.81
At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transfera... 31 1.1
At5g26350.1 68418.m03150 hypothetical protein 30 1.9
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 29 2.5
At5g27860.1 68418.m03342 expressed protein 29 2.5
At3g25840.1 68416.m03219 protein kinase family protein contains ... 29 2.5
At1g65440.1 68414.m07424 glycine-rich protein 29 2.5
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 29 3.3
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 3.3
At3g43800.1 68416.m04681 glutathione S-transferase, putative glu... 29 3.3
At3g05830.1 68416.m00654 expressed protein 29 3.3
At1g68790.1 68414.m07863 expressed protein 29 3.3
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 4.3
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 29 4.3
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 29 4.3
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 29 4.3
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 4.3
At1g56660.1 68414.m06516 expressed protein 29 4.3
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 29 4.3
At1g11740.1 68414.m01347 ankyrin repeat family protein contains ... 29 4.3
At5g48040.1 68418.m05936 hypothetical protein 28 5.7
At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit (... 28 5.7
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 28 5.7
At3g29075.1 68416.m03637 glycine-rich protein 28 5.7
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 28 5.7
At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to autop... 28 5.7
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 28 5.7
At5g14270.1 68418.m01669 DNA-binding bromodomain-containing prot... 28 7.5
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 28 7.5
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 28 7.5
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 28 7.5
At5g16030.1 68418.m01874 expressed protein 27 9.9
At4g11990.1 68417.m01908 expressed protein hypothetical protein ... 27 9.9
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 27 9.9
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 27 9.9
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 27 9.9
At3g05760.1 68416.m00647 expressed protein 27 9.9
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 27 9.9
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = -3
Query: 718 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE--LKERQKQQLRHKALKKGLD 554
K + +E+ E +VKLE + Y+LEE + R++ +KE LK + K++L+ + K L+
Sbjct: 69 KEHDEFEEISEILVKLEKKYYELEEVENRENLQMKEKTLKRKYKRELKKSSKIKELE 125
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -3
Query: 676 KLETEKYDLEERQKRQDYDL-KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVAS-K 503
++ETEK EE++K ++ D+ K +K+ + L ALK+ L+ T K + Q + +
Sbjct: 212 QIETEKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQELE----TTKRKYEQQYSQIE 267
Query: 502 YERRVDTRSYDDKKKLFEGDLEKLNKD 422
+ + + ++++KK E D++KL K+
Sbjct: 268 SQTKTEKSKWEEQKKNEEEDMDKLLKE 294
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094) [Homo
sapiens]
Length = 927
Score = 35.5 bits (78), Expect = 0.037
Identities = 31/140 (22%), Positives = 63/140 (45%)
Frame = -3
Query: 727 SXDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPE 548
S +K RQ+A E + + + E LE R + + +++EL+ + KQ+L+ L L +
Sbjct: 700 SLEKERQRAAENRQEYLAAKEEADTLEGRANQLEVEIRELRRKHKQELQEVLLHNELIQK 759
Query: 547 ALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQK 368
L + ++ + + R+++ + ++ + + N F EK A K
Sbjct: 760 DLEREKASRLDL--ERTARINSSAVSEQLPIARQNSAFENDKFSEKRSMPEATMSPYYMK 817
Query: 367 ARLPKWFGERPGKKKGELES 308
+ P + +K+GEL S
Sbjct: 818 SITPSAYEATLRQKEGELAS 837
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 34.3 bits (75), Expect = 0.087
Identities = 30/115 (26%), Positives = 51/115 (44%)
Frame = -3
Query: 733 GLSXDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLD 554
GLS D R + + ++ L + D++ +RQD D+ + Q QLRH L K
Sbjct: 115 GLSLDNARVASSD-GSALLSLVGD--DIDRELQRQDADIDRFLKIQGDQLRHAILDKIKR 171
Query: 553 PEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAE 389
+ T + V E+ + + K K E +E+L + + WQ+RA+
Sbjct: 172 GQQKTVSLMEEKVVQKLREKDEELERINRKNKELEVRMEQLTME--AEAWQQRAK 224
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = -3
Query: 721 DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL 542
D+L EL E VK ++ + +L E K+ + KEL+E +K L KG++ + L
Sbjct: 522 DELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSLNKEVKGMEKQIL 581
Query: 541 TGKHPPKIQVASKYERRVDTRSYDDKKK---LFEGDLEKLN 428
+ K + + E V +S D+ K + +LEK+N
Sbjct: 582 MEREARK-SLETDLEEAV--KSLDEMNKNTSILSRELEKVN 619
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -2
Query: 683 HRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQ 504
HR++RDR+ R R+ +R++ ++++ +E +S E R +S HR S S
Sbjct: 127 HRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSE-HRHKSEHRSRSRSRSRSKS 185
Query: 503 VREA 492
R +
Sbjct: 186 KRRS 189
>At3g58940.1 68416.m06568 F-box family protein contains F-box domain
Pfam:PF00646
Length = 618
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -3
Query: 700 QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQL 584
QE+ + ++++ E DL+ERQ+ Q+ L +LKER + L
Sbjct: 486 QEMSQDYLQMQLEVADLKERQRDQEAKLADLKERLRAML 524
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 679 VKLETEKYDLEERQKRQDYDLKELKERQKQQ 587
+KLE EK + EE+Q +QD DL +L+ + +Q
Sbjct: 233 LKLELEKAEKEEQQAKQDSDLAKLRVEEMEQ 263
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Frame = -3
Query: 670 ETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYER 494
+++K ++++++K+ D ++ KE++ ++ K LKK D + T K Q +K E+
Sbjct: 1172 KSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEK 1231
Query: 493 RVDTRSYDDKK---KLFEGDLEKLNKDFLEKVWQERAE 389
+ DDKK K G E + + E Q++++
Sbjct: 1232 ---NKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQ 1266
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.5 bits (68), Expect = 0.61
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = -2
Query: 677 QTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPR----SAHRQAPAQNSSS 510
+ R RE +RE + R + QRK + E + +E R R + R+ Q
Sbjct: 561 EARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKER 620
Query: 509 VQVREACRHTILRRQKETVRG*PRETEQGLPREGVAREGR 390
++ R R+++E + E Q RE V R+ R
Sbjct: 621 EEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRR 660
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = -3
Query: 649 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPP-KIQVASKYERRVDTRSY 473
EER+K ++ K +ERQ+++ K+ + E + K + K E + R
Sbjct: 521 EEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRRE 580
Query: 472 DDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 308
++++ + E++ + E+ ++R E+ R++ K E +KK E E+
Sbjct: 581 QERQR---KEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEA 632
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = -2
Query: 671 RDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREA 492
++ E+ +RE + + +RK + E + +E +R R R+ + + RE
Sbjct: 525 KEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERK---REEEMAKRREQ 581
Query: 491 CRHTILRRQKETVRG*PRETEQGLPREGVAREGRTVRRQAK 369
R R+++E V RE EQ RE + R RQ K
Sbjct: 582 ERQ---RKEREEVERKIRE-EQERKREEEMAKRREQERQKK 618
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -3
Query: 655 DLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL----TGKHPPKIQVASKYERRV 488
+LEE+ + + D++E E K+Q ++A K + + + P K+ SK V
Sbjct: 269 ELEEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESV 328
Query: 487 DTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 308
+ + + ++++ E E++ ++ EK + +Q ++ K G+ +K E ES
Sbjct: 329 EETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEES 388
>At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18)
Length = 593
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = -3
Query: 679 VKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKY 500
VK E K+ + R+K++ +L+ KE+++++ + K +K +D A ++ K
Sbjct: 491 VKFEEIKFKDKYREKQRQQNLQVRKEKRQEEKKEKGKRKRVDASASNDPKKASRKLTGKQ 550
Query: 499 ERRVDT 482
+ + T
Sbjct: 551 RQTIQT 556
>At2g41960.1 68415.m05191 expressed protein
Length = 1215
Score = 31.1 bits (67), Expect = 0.81
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Frame = -3
Query: 730 LSXDKLRQKAQELWECIVKLETEKYDLEE--RQKRQDYDLKE---LKERQKQQLRHKALK 566
LS + L Q+ + IV LE + LEE ++KR++ + KE +KER+K+ R + LK
Sbjct: 475 LSSELLEQRVHIACKEIVTLEKQNKLLEEEEKEKREEEERKERKRIKEREKKLRRKERLK 534
Query: 565 K 563
+
Sbjct: 535 E 535
>At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = -3
Query: 700 QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLD 554
Q++W+ V+++TEK +++ ++ +KE+ E ++ + K +KK D
Sbjct: 375 QDVWKAGVRVKTEKESGIAKREEIEFSIKEVMEGERSKEMKKNVKKWRD 423
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = -3
Query: 721 DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQK 593
+KL ++ ++L + +LE EK LEE +K+ ++++ ER+K
Sbjct: 58 NKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREK 100
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -3
Query: 718 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELK-ERQKQQLRHKALKK 563
K +++ +L E KLE EK LEE +K+ + + K+L+ E R K L++
Sbjct: 52 KHKEEKNKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREKVLRQ 104
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = -3
Query: 673 LETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYER 494
L+ + L++ + + D +ELK+ + +HK ++ LD E K K +
Sbjct: 283 LQNLENSLKDERVKMDESNEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKH 342
Query: 493 RVDTRSYDDKKKLFEGDLEK 434
R D + K K E LEK
Sbjct: 343 REDLKHVKQKIKKLEDKLEK 362
>At5g27860.1 68418.m03342 expressed protein
Length = 177
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = -2
Query: 683 HRQTRDREIRSRREAKETGLRLKRAQRKT-KAATEAQSSQEGSRPRSAHRQAPAQNSSSV 507
HR+ +DR R + L++++ R T K Q S + S + + + +S
Sbjct: 20 HRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRRRQHSSDSSDSSYSDSSSESSDSEHE 79
Query: 506 QVREACRHTILRRQKETVRG*PRETEQGLPREGVAREG 393
+ R +H ++ K+ R ++ RE EG
Sbjct: 80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEG 117
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -2
Query: 671 RDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRS-AHRQAPAQNSSSVQVRE 495
R+RE RRE + R K +R+ + + +EG R A+ + +++ + RE
Sbjct: 288 REREREKRREIESDRERRKEKERERSIDRDRRKEREGDYLRDRANERGRSRDRTRYNSRE 347
Query: 494 ACRHTILRRQKETVRG*PRETEQ 426
R +K+ RG RET++
Sbjct: 348 RKREKEREGEKDWERG--RETQK 368
>At1g65440.1 68414.m07424 glycine-rich protein
Length = 1647
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -3
Query: 682 IVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPE 548
IV E E+ + EE ++R+D D +ERQK++ + K +GLD +
Sbjct: 52 IVNDEDEEEEEEEDEERKDSD----EERQKKKKKRKKKDEGLDED 92
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -3
Query: 649 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKI-QVASKYERRVDTRSY 473
+ER+K + D + K+++K++ RHK + D E K ++ + ASK D ++
Sbjct: 84 KEREKDKSRDRVKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETH 143
Query: 472 DDKKKLFEGDLEKLNK 425
++ D LN+
Sbjct: 144 KAAERYEHSDNRGLNE 159
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.1 bits (62), Expect = 3.3
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Frame = -3
Query: 679 VKLETEKYDLE--ERQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVA 509
V E EK++ E +R+ Q LKE+ +R+K ++ K+ K G + PE L K +
Sbjct: 262 VMRELEKFEREAGKRKVEQAKYLKEIAQREK-KIAEKSSKLGKIQPELLRFK-----EEI 315
Query: 508 SKYERRVDTRSYD-DKKKLFEG----DLEKLNKDFLE 413
++ + +++T D DK+K +G ++E++ K E
Sbjct: 316 ARIKAKIETNRKDVDKRKKEKGKHSKEIEQMQKSIKE 352
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = -3
Query: 730 LSXDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQK 593
+ + LR K +E+ K+ET + D+++R+K + KE+++ QK
Sbjct: 304 IQPELLRFK-EEIARIKAKIETNRKDVDKRKKEKGKHSKEIEQMQK 348
>At3g43800.1 68416.m04681 glutathione S-transferase, putative
glutathione transferase, papaya, PIR:T09781
Length = 227
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 63 KLMDWLQNCRTRPA 104
KLMDW++ C TRPA
Sbjct: 186 KLMDWIRKCLTRPA 199
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/53 (24%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = -3
Query: 715 LRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE--RQKQQLRHKALKK 563
L++K +L C+ + ++ L+ + +R+D ++KE+++ +KQ L +++ K
Sbjct: 258 LKKKVLKLEFCLQEARSQTRKLQRKGERRDMEIKEIRDLISEKQNLNNESWDK 310
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = -2
Query: 743 DHRGSLXRQTPT-----EGP-GTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATE 582
DH S Q+ T EGP G+L ++ D+ R R + G ++ + TKA +
Sbjct: 821 DHEPSATEQSFTDSRIQEGPEGSLQSEMKS-DKPRRGRGRGRGRGKSVRGRSQATKAVSR 879
Query: 581 AQSSQEGSRPRSAHRQAPAQNSSSVQ 504
+G PR R+ ++ + S Q
Sbjct: 880 DSKPSDGETPRKRQREQTSRITESEQ 905
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -3
Query: 679 VKLETEKYDLEERQKRQDYDLKELKERQKQQ 587
+KLE EK + EE+Q +QD +L +++ + ++
Sbjct: 212 LKLELEKAEKEEQQAKQDSELAQMRVEEMEK 242
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = -2
Query: 707 EGPGTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPR--SAHRQ 534
E G R R RE R+ +E G + + R K+ + + + G R R HR
Sbjct: 24 EESGNERSERSYRKRE-GGERQGEEGGEEERVSSRSKKSRGDGEENGGGKRDRERERHRS 82
Query: 533 APAQNSSSVQVREACRHTILRRQKETVRG*PRETEQGLPREGVAREGRTVRRQAK 369
+ ++ +VRE R R++ + + ++ RE RE R+ R +
Sbjct: 83 SRDKDRERDKVREGSRDKESDRERSSKERDRSDRDKPRDRERREREKRSSSRSRR 137
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 656 VFLGLEFDDALPEFLGLLSEFVXGETL 736
VF+ EFD+ LP++L L V +TL
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDTL 449
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 656 VFLGLEFDDALPEFLGLLSEFVXGETL 736
VF+ EFD+ LP++L L V +TL
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDTL 449
>At1g76780.1 68414.m08935 expressed protein ; expression supported
by MPSS
Length = 1871
Score = 28.7 bits (61), Expect = 4.3
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Frame = -3
Query: 721 DKLRQKAQELWECIVKLETEKYDLEERQKRQDY--DLKELKERQKQQLRHKALKKGLDPE 548
DK+ +++++ + KL+ + QKR D ++KEL+E Q + L P
Sbjct: 439 DKVGAQSEDI--SLTKLQEIGEQQFQGQKRHDKQENIKELREGQASEAEKNIKNDILKPV 496
Query: 547 ALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQK 368
+ KIQ + E Y++ K+ E +K+N+D KV QE Q +
Sbjct: 497 QKRSEGKHKIQKTFQEETNKQPEGYNE--KIMETG-KKINEDGTRKV-QEMIRQQELDEP 552
Query: 367 ARLPK 353
AR K
Sbjct: 553 ARSEK 557
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = -3
Query: 676 KLETEKYDLEERQKRQDYDLKELKE-RQKQQLRHKALK-KGLDPEALTGKHPPKIQVASK 503
K E ++ EE++K+ D + KE E +K+ + K K KG PE K A++
Sbjct: 252 KKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKEHDATE 311
Query: 502 YERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAE 389
E + + + KK D K + +++V ++ +
Sbjct: 312 QEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETK 349
Score = 27.5 bits (58), Expect = 9.9
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = -3
Query: 676 KLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYE 497
K + EK D EE++K D +E+KE+ ++ + K + E K P K K E
Sbjct: 221 KGDLEKED-EEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEE--KKKKPDK----EKKE 273
Query: 496 RRVDTRSYDDKKKLFEGDLEKLNKD 422
+ T D K K +G EK K+
Sbjct: 274 KDESTEKEDKKLKGKKGKGEKPEKE 298
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = -3
Query: 742 TIEGLSXDKLRQKAQELWECIVKLETEKYD---LEERQKRQDYDLKELKERQKQQLRHKA 572
TIE + +++K EL++ IVK E K D ++ER + L+EL + ++ +
Sbjct: 679 TIEEATFRDIQEKKMELYQAIVKFEEGKLDDSIVKERTEHIQSGLEELIKNLNERCKQYG 738
Query: 571 LK 566
++
Sbjct: 739 VR 740
>At1g11740.1 68414.m01347 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 624
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 656 RSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQA-PAQNSSSVQVREACRHT 480
+SR+ KE GLRL +R Q ++ R S A NSS +++E
Sbjct: 311 KSRKVGKEQGLRLDETRRSVSEPLRPQRREQRRRSVSLPEAAILVANSSVGRIKEKEIVK 370
Query: 479 ILRRQKETVRG*PRETEQGLP-REGVAREGRTVRR 378
LR P +TE+ LP + +A + VRR
Sbjct: 371 SLRPSVWLTDQFPLKTEELLPLLDILANHVKAVRR 405
>At5g48040.1 68418.m05936 hypothetical protein
Length = 422
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 571 LKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF----EGDLEKLNKDFLEKVW 404
L++ D L KHP ++V K+ ++ D + L+ E DLEK N VW
Sbjct: 335 LREAYDRRHLIEKHP-LVEVREKFANMMNEGFLDRSRGLYQKSVEADLEKNNIKTSYPVW 393
Query: 403 QERAEQ 386
+ E+
Sbjct: 394 SDEEEE 399
>At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit
(IRX5) nearly identical to cellulose synthase
[Arabidopsis thaliana] GI:27462651; contains Pfam
profile PF03552: Cellulose synthase
Length = 1049
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = -3
Query: 508 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGK 329
SK + R + R++ + D E + + W+ER +++ RQ+ R GE+ +
Sbjct: 123 SKQQWRPNGRAFSSTGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQTNE 182
Query: 328 KKGELE 311
K + E
Sbjct: 183 DKEDDE 188
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = -3
Query: 664 EKYDLEERQKRQDYDLKELKERQKQQLR-HKALKKGLDPEAL-TGKHPPKI--QVASKYE 497
E L + +R + +L+E KER +QQL+ K+ + L+ A K + ++ +
Sbjct: 288 ENQQLRQMMERVETELRETKERLEQQLKEEKSARLELEKRAKEVEKRSSDVVKELNDEQA 347
Query: 496 RRVDTRS-YDDKKKLFEGDLEKLNKD 422
+R+++ S + K G +E LNK+
Sbjct: 348 KRLESESRAKEAVKQSNGVVENLNKE 373
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -3
Query: 670 ETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERR 491
E + D ++ +DYD + K ++K++ + K KK D K + +Y+
Sbjct: 139 EDDGDDGHKKHSGKDYDDGDEKSKKKEKEKKKDKKK--DGNNSEDDEFKKKKKKEQYKEH 196
Query: 490 VDTRSYDDKKK 458
D YD+KKK
Sbjct: 197 HDDDDYDEKKK 207
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = -3
Query: 508 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQE 398
S+ ER + ++D+++ EG++EKL+K LE+ + E
Sbjct: 429 SEKEREIKKNLFEDQQQQLEGNVEKLSK-ILEEPFDE 464
>At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to
autophagy 8c [Arabidopsis thaliana] GI:19912155;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 119
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 589 QLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDL 440
+L H ++ ++ + K+P +I V + R D + D KK L DL
Sbjct: 7 KLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADL 56
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -3
Query: 718 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKA 572
+L++K +L C+ + + L++ +R D ++ELKE+ + +H+A
Sbjct: 257 ELKKKVLKLEFCLRETRIQTRKLQKMGERNDVAIQELKEQLAAKKQHEA 305
>At5g14270.1 68418.m01669 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 688
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -2
Query: 677 QTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVR 498
Q + + R + EAK ++A+ + A A++ ++ R A RQA + SV++
Sbjct: 550 QKKKEKARLQAEAKAAEEARRKAEAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELN 609
Query: 497 E 495
E
Sbjct: 610 E 610
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 668 DREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRS-AHRQAPAQNSSSVQVREA 492
DRE + R+ + R+KR +R + + + + SS S S A+ + ++SSS +
Sbjct: 205 DREAKETRKKESNEKRIKRKRRYSSSDSYSSSSDSDSDSESEAYSSSSYESSSSSDGKHR 264
Query: 491 CRHTILRRQ 465
R + R +
Sbjct: 265 KRKSTTRHK 273
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 668 DREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRS-AHRQAPAQNSSSVQVREA 492
DRE + R+ + R+KR +R + + + + SS S S A+ + ++SSS +
Sbjct: 205 DREAKETRKKESNEKRIKRKRRYSSSDSYSSSSDSDSDSESEAYSSSSYESSSSSDGKHR 264
Query: 491 CRHTILRRQ 465
R + R +
Sbjct: 265 KRKSTTRHK 273
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -2
Query: 686 VHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSV 507
+ R+ ++R+ RE K L +KR + T AT + + P+S R A SSS+
Sbjct: 404 LERREKERQGERERERKRA-LEIKRDRTPTARATSKDTKERTPVPKSISRDA---RSSSL 459
Query: 506 QVREACRHTILRR 468
+ R +RR
Sbjct: 460 RRDAHHREASIRR 472
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Frame = -3
Query: 664 EKYDLEERQKRQDYDLKELKERQK--QQLRHKALKKGLDPEALTGKHPPKIQVASKYERR 491
EK +E +K D E+K + + ++ + K +D + TG K + + +
Sbjct: 861 EKKVMEVGKKSSDSGSVEMKPTAESLEDVKDENASKTVDVKQETGSPDTKKKEGASSSSK 920
Query: 490 VDTRSYDDKKKLFEGDLEKLN------------KDFLEKVWQERAEQFGGRQKARL 359
DT++ +DKK + + E ++ K+ EKV ++ ++ GG+ ++R+
Sbjct: 921 KDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVKEKVTEKEIKERGGKDESRI 976
>At5g16030.1 68418.m01874 expressed protein
Length = 339
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = -3
Query: 739 IEGLSXD-KLRQKA-QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALK 566
++G D KL +K +E + + E E+ + EE+Q + D KE ++ Q+++ + K K
Sbjct: 246 VKGQQQDVKLEEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEEEEKTKKKK 305
Query: 565 KG 560
+G
Sbjct: 306 RG 307
>At4g11990.1 68417.m01908 expressed protein hypothetical protein
F7H19.40 - Arabidopsis thaliana, PID:e1310054
Length = 501
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 679 VKLETEKYDLEERQKRQDYDLKELKER-QKQQLRHKALKKGLDPEAL 542
+K + + +RQK L+++ E Q+ L HKALKK LD +L
Sbjct: 194 IKCLSSEIQSAKRQKLDGGLLRKVAEAAQETNLVHKALKKDLDKNSL 240
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 616 KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSY-DDKKKLFEGDL 440
+ELK+ +++ R +ALK+ EA KH AS+ R + R ++ K ++ +L
Sbjct: 83 EELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSEL 142
Query: 439 EKLNK 425
E + +
Sbjct: 143 EAMQR 147
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 616 KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSY-DDKKKLFEGDL 440
+ELK+ +++ R +ALK+ EA KH AS+ R + R ++ K ++ +L
Sbjct: 83 EELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSEL 142
Query: 439 EKLNK 425
E + +
Sbjct: 143 EAMQR 147
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 616 KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSY-DDKKKLFEGDL 440
+ELK+ +++ R +ALK+ EA KH AS+ R + R ++ K ++ +L
Sbjct: 85 EELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSEL 144
Query: 439 EKLNK 425
E + +
Sbjct: 145 EAMQR 149
>At3g05760.1 68416.m00647 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 709 QKAQELWECIVKLETE----KYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPE 548
++ QE +E + K + + DL+ER ++Q + +ELK +++++ + K K ++ E
Sbjct: 123 EQVQERFEVLKKRKAPGTFTEQDLDERIRKQQEEEEELKRQRREKKKEKKKGKVVEEE 180
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = -3
Query: 706 KAQELWECIVKLETEKYDLEERQKRQDYDLKELKER---QKQ-QLRHKALKKGLDPEALT 539
K +E E +++ ++ + E+ QKR++ + ELK++ QKQ + + LKK D +LT
Sbjct: 294 KEKEETESRKRIKKQQDESEKEQKRREKEQAELKKQLQVQKQASIMERFLKKSKD-SSLT 352
Query: 538 GKHPPKIQVASK 503
P +V ++
Sbjct: 353 QPKLPSSEVTAQ 364
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,728,481
Number of Sequences: 28952
Number of extensions: 165477
Number of successful extensions: 1063
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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