BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_H01 (654 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase Gpd3|... 237 8e-64 SPBC32F12.11 |tdh1|gpd1|glyceraldehyde-3-phosphate dehydrogenase... 236 2e-63 SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 27 1.8 SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 4.1 SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 25 7.2 SPBC1271.07c |||N-acetyltransferase |Schizosaccharomyces pombe|c... 25 9.5 >SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase Gpd3|Schizosaccharomyces pombe|chr 2|||Manual Length = 335 Score = 237 bits (581), Expect = 8e-64 Identities = 110/149 (73%), Positives = 126/149 (84%) Frame = -3 Query: 652 TXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 473 T DGPS K WR GRGA NIIP+STGAAKAVGKVIPALNGKLTGMAFRVP +VSVVDLT Sbjct: 187 TVDGPSKKDWRGGRGASANIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLT 246 Query: 472 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDN 293 V+L KP +YE IK +K A+EGP+KG+LGYTED VVS+DF GD+HSSIFDA+AGI L+ Sbjct: 247 VKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDSVVSTDFCGDNHSSIFDASAGIQLSPQ 306 Query: 292 FVKLISWYDNEYGYSSRVIDLIKYIQSKD 206 FVKL+SWYDNE+GYS RV+DL+ Y SKD Sbjct: 307 FVKLVSWYDNEWGYSHRVVDLVAYTASKD 335 >SPBC32F12.11 |tdh1|gpd1|glyceraldehyde-3-phosphate dehydrogenase Tdh1|Schizosaccharomyces pombe|chr 2|||Manual Length = 336 Score = 236 bits (577), Expect = 2e-63 Identities = 109/149 (73%), Positives = 126/149 (84%) Frame = -3 Query: 652 TXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 473 T DGPS K WR GRGA NIIP+STGAAKAVGKVIPALNGKLTGMAFRVP +VSVVDLT Sbjct: 187 TVDGPSKKDWRGGRGASANIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLT 246 Query: 472 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDN 293 V+L KP +YE IK +K A+EGP+KG+LGYTED VVS+DF GD+HSSIFDA+AGI L+ Sbjct: 247 VKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDAVVSTDFCGDNHSSIFDASAGIQLSPQ 306 Query: 292 FVKLISWYDNEYGYSSRVIDLIKYIQSKD 206 FVKL+SWYDNE+GYS RV+DL+ Y +KD Sbjct: 307 FVKLVSWYDNEWGYSRRVVDLVAYTAAKD 335 >SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1958 Score = 27.5 bits (58), Expect = 1.8 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Frame = +2 Query: 365 HNLIFSIPE---NALQRTFSCLLDLLLDGF 445 +++I IPE N++Q T C+LD +LD F Sbjct: 174 NDMIDEIPEKLENSIQTTIDCVLDFVLDVF 203 >SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr 1|||Manual Length = 530 Score = 26.2 bits (55), Expect = 4.1 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 310 ISLNDNFV-KLISWYDNEYGYSSRVIDLIKYI 218 + +DNFV K I+WY N YSS + +Y+ Sbjct: 307 LGYSDNFVNKGINWYYNWGSYSSGLSSSFEYV 338 >SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 25.4 bits (53), Expect = 7.2 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Frame = +3 Query: 321 ASKIEECESPMKSEDTT*SSVYPRMPFKGPSAASLTFCLMAS*LAGFPR-RTVRSTTDTL 497 +SK EE + S T + P P+ PS A + S AG+ +T +TT+ Sbjct: 303 SSKREEAAAEPSSSTAT--DIPP--PYSTPSVAGASDYSTPS--AGYQTVQTTTTTTEAA 356 Query: 498 ATGTRNAI---PVSLPLRAGITLPTALAAPVEAGMMFC*APRPS 620 A A P +P A + T +AAPV A P P+ Sbjct: 357 AAQYPQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPA 400 >SPBC1271.07c |||N-acetyltransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 163 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 313 GISLNDNFVKLISWYDNEYGYSSRVIDLI 227 G+ L VK I Y + GYSS V+D + Sbjct: 97 GLKLGVLLVKEIIQYSEKLGYSSMVLDTL 125 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,359,675 Number of Sequences: 5004 Number of extensions: 44013 Number of successful extensions: 104 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 104 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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