Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_H01
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 229 1e-60
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 226 1e-59
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 225 2e-59
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 223 6e-59
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 132 2e-31
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 132 3e-31
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 130 6e-31
At5g10500.1 68418.m01216 kinase interacting family protein simil... 31 0.67
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 29 2.7
At3g12685.1 68416.m01583 expressed protein contains Pfam domain,... 29 3.6
At1g24350.1 68414.m03071 expressed protein contains Pfam domain,... 28 4.7
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 6.2
At3g49450.1 68416.m05405 F-box family protein contains F-box dom... 27 8.2
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 27 8.2
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 229 bits (560), Expect = 1e-60
Identities = 107/145 (73%), Positives = 126/145 (86%)
Frame = -3
Query: 652 TXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 473
T DGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGKLTGMAFRVP +NVSVVDLT
Sbjct: 271 TVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLT 330
Query: 472 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDN 293
RL K ASYE +K +K A+EGPLKGILGYT++ VVS+DF+GDS SSIFDA AGI L+ +
Sbjct: 331 CRLEKGASYEDVKAAIKHASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDANAGIGLSKS 390
Query: 292 FVKLISWYDNEYGYSSRVIDLIKYI 218
FVKL+SWYDNE+GYS+RV+DLI+++
Sbjct: 391 FVKLVSWYDNEWGYSNRVLDLIEHM 415
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 226 bits (552), Expect = 1e-59
Identities = 106/145 (73%), Positives = 125/145 (86%)
Frame = -3
Query: 652 TXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 473
T DGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGKLTGMAFRVP NVSVVDLT
Sbjct: 269 TVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLT 328
Query: 472 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDN 293
RL K ASYE +K +K A+EGPL+GILGYTE+ VVS+DF+GDS SSIFDA AGI L+ +
Sbjct: 329 CRLEKDASYEDVKAAIKFASEGPLRGILGYTEEDVVSNDFLGDSRSSIFDANAGIGLSKS 388
Query: 292 FVKLISWYDNEYGYSSRVIDLIKYI 218
F+KL+SWYDNE+GYS+RV+DLI+++
Sbjct: 389 FMKLVSWYDNEWGYSNRVLDLIEHM 413
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 225 bits (551), Expect = 2e-59
Identities = 106/145 (73%), Positives = 125/145 (86%)
Frame = -3
Query: 652 TXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 473
T DGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGM+FRVP +VSVVDLT
Sbjct: 191 TVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLT 250
Query: 472 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDN 293
VRL K A+Y+ IK+ +KE +EG LKGILGYTED VVS+DF+GD+ SSIFDA AGI+L+D
Sbjct: 251 VRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDK 310
Query: 292 FVKLISWYDNEYGYSSRVIDLIKYI 218
FVKL+SWYDNE+GYSSRV+DLI ++
Sbjct: 311 FVKLVSWYDNEWGYSSRVVDLIVHM 335
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 223 bits (546), Expect = 6e-59
Identities = 104/145 (71%), Positives = 125/145 (86%)
Frame = -3
Query: 652 TXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 473
T DGPS K WR GR A NIIP+STGAAKAVGKV+P+LNGKLTGM+FRVP +VSVVDLT
Sbjct: 191 TVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLT 250
Query: 472 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDN 293
VRL K A+Y+ IK+ +KE +EG +KGILGYTED VVS+DF+GD+ SSIFDA AGI+L+D
Sbjct: 251 VRLEKAATYDEIKKAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDK 310
Query: 292 FVKLISWYDNEYGYSSRVIDLIKYI 218
FVKL+SWYDNE+GYSSRV+DLI ++
Sbjct: 311 FVKLVSWYDNEWGYSSRVVDLIVHM 335
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 132 bits (319), Expect = 2e-31
Identities = 66/131 (50%), Positives = 86/131 (65%)
Frame = -3
Query: 622 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYE 443
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K E
Sbjct: 260 RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAE 319
Query: 442 AIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDN 263
+ ++AAE LKGIL ++ +VS DF SS D++ + + D+ VK+I+WYDN
Sbjct: 320 EVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDN 379
Query: 262 EYGYSSRVIDL 230
E+GYS RV+DL
Sbjct: 380 EWGYSQRVVDL 390
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 132 bits (318), Expect = 3e-31
Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 1/139 (0%)
Frame = -3
Query: 622 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPA-SY 446
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL + + K +
Sbjct: 279 RRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTA 338
Query: 445 EAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYD 266
E + + ++AA GP+KGIL + +VS DF S+ D++ + + D+ VK+++WYD
Sbjct: 339 EDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYD 398
Query: 265 NEYGYSSRVIDLIKYIQSK 209
NE+GYS RV+DL + SK
Sbjct: 399 NEWGYSQRVVDLAHLVASK 417
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 130 bits (315), Expect = 6e-31
Identities = 64/131 (48%), Positives = 86/131 (65%)
Frame = -3
Query: 622 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYE 443
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K E
Sbjct: 257 RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAE 316
Query: 442 AIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDN 263
+ +++AE LKGIL ++ +VS DF S+ D++ + + D+ VK+I+WYDN
Sbjct: 317 EVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDN 376
Query: 262 EYGYSSRVIDL 230
E+GYS RV+DL
Sbjct: 377 EWGYSQRVVDL 387
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 258 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 389
Y +LISF + SFK A A + + +++ +TT +SV+P
Sbjct: 59 YKRRPELISFVEESFKAYRALAERYDHISKELQNANTTIASVFP 102
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 258 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 389
Y +LISF + S++ A A + + + +++ +TT +SV+P
Sbjct: 3 YKKRPELISFVEESYRAYRALAERYDHISTELQNANTTIASVFP 46
>At3g12685.1 68416.m01583 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 213
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = -3
Query: 577 GAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLK 398
G + VGK LN KLT A R V ++ G ++ +++ E PLK
Sbjct: 135 GVRREVGKHAKVLN-KLTANARRSEVMSLK--------GNESNKALTSEEISEEIAPPLK 185
Query: 397 GILGYTEDQVVSSDFIG 347
+G+TE +V++ G
Sbjct: 186 ESIGHTEVEVIAGALFG 202
>At1g24350.1 68414.m03071 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 168
Score = 28.3 bits (60), Expect = 4.7
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Frame = -3
Query: 592 IPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVV--DLT-VRLGKPASYEAIKQKVK 422
+P+S A V L G F + + SVV D T VRL E + Q V
Sbjct: 61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVY 120
Query: 421 E-------AAEGPLKGILGYTEDQVVSSDFIGDS 341
E A PL+ +LG+T QVV+ +G +
Sbjct: 121 ELPAEHPLAESRPLRELLGHTPPQVVAGGMLGSA 154
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 436 KQKVKEAAEGPLKGILGYTE-DQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLIS 275
+++ KE E P+KG E + +V + IGD S+ + S N+N+ L S
Sbjct: 814 EEEEKEVLENPVKGEEEAREMETLVVEEDIGDETPSLTEIVENSSENENYTSLRS 868
>At3g49450.1 68416.m05405 F-box family protein contains F-box domain
Pfam:PF00646
Length = 397
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -3
Query: 613 RGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIK 434
R A+ I STG K++ KV +T + + V+ +T+R KP ++A +
Sbjct: 146 RDARMMICNPSTGQFKSLPKVRSCRGNVITYIGYNPIEKQYKVLCMTIR-EKPFKFKAEE 204
Query: 433 QKVKEAAEGPLK 398
+V G LK
Sbjct: 205 HQVLTLGTGKLK 216
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 405 GPSAASLTFCLMAS*LAGFPRRT-VRSTTDTLATGTRNAIPVSLPLRAG 548
GP + + C MA+ AGFP +R+ ++G + V+ ++AG
Sbjct: 99 GPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAG 147
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,989,364
Number of Sequences: 28952
Number of extensions: 220657
Number of successful extensions: 625
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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