Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G24
(777 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 102 4e-22
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 9e-22
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 77 1e-14
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 76 4e-14
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 71 1e-12
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 68 7e-12
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 68 7e-12
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 68 1e-11
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 66 2e-11
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 64 9e-11
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 63 3e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 60 1e-09
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 60 1e-09
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 60 3e-09
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 59 5e-09
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 54 2e-07
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 54 2e-07
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 52 4e-07
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 52 4e-07
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 48 1e-05
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 47 2e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 46 5e-05
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 46 5e-05
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 44 1e-04
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 44 2e-04
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 43 2e-04
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 42 7e-04
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 41 0.001
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 39 0.004
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 38 0.009
SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05) 37 0.021
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 31 1.0
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 31 1.4
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 29 4.2
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_10873| Best HMM Match : Exo_endo_phos (HMM E-Value=0.068) 28 9.7
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 103 bits (246), Expect = 2e-22
Identities = 47/98 (47%), Positives = 64/98 (65%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R++ L FK G IL+ATDVA+RGLD+ I YVIN+D+P EDY+HR+GRTGR+ G
Sbjct: 81 REQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAGRSG 140
Query: 596 TSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMADR 483
TS F + + R A L+ ++ +ANQ + L MA R
Sbjct: 141 TSLTFISREDWRSAHKLIKIMVQANQEVPDFLHDMAKR 178
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 103 bits (246), Expect = 2e-22
Identities = 48/98 (48%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R+E L F++GR +L+AT+VAARGLD+D +K+VINFD P+ ++Y+HRIGRTGR +KG
Sbjct: 1001 REEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYVHRIGRTGRIGNKG 1060
Query: 596 TSYAFFTPS-NSRQAKDLVSVLQEANQMISPQLQSMAD 486
+ FF + + A+ LV VL EANQ + L+ +A+
Sbjct: 1061 KATTFFLRGRDDKVARGLVKVLSEANQEVPEWLEEIAE 1098
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 102 bits (244), Expect = 4e-22
Identities = 44/71 (61%), Positives = 58/71 (81%)
Frame = -2
Query: 698 DVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQ 519
D+ IK+VINFD+PN +EDY+HRIGRT RS GTSY FFT +N++QAK+LVSVLQEA Q
Sbjct: 351 DISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELVSVLQEAKQ 410
Query: 518 MISPQLQSMAD 486
++P+L ++ D
Sbjct: 411 HVNPKLLNLQD 421
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 101 bits (241), Expect = 9e-22
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R+E L F+ G ILVAT VAARGLD+ +K+VINFD P E+Y+HRIGRTGR G
Sbjct: 1139 REEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGHTG 1198
Query: 596 TSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 489
+ +FF N AK+L+ +L+E+ Q I L+SMA
Sbjct: 1199 LATSFFNHKNKNVAKELMDILEESKQEIPSWLESMA 1234
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R+ L K G ILVATDVA RG+D+ + +VIN+D + EDY HRIGRTGR+ G
Sbjct: 323 REFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTHRIGRTGRAGKTG 382
Query: 596 TSYAFFTPSNSRQAKDLVSVL 534
+ +F T S+S DL +L
Sbjct: 383 IAVSFLTQSDSGVFYDLKQLL 403
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R+ ++ F+ G+ +L++TDV ARGLDV + VIN+D PN+ E YIHRIGR+GR KG
Sbjct: 275 REAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG 334
Query: 596 TSYAFFTPSNSRQAKDL 546
+ F + R +D+
Sbjct: 335 VAINFVKSDDIRILRDI 351
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 75.8 bits (178), Expect = 4e-14
Identities = 39/93 (41%), Positives = 61/93 (65%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R +++ F++G+ ILVATDVA+RGLD + +VIN+D P++ E YIHR GRTGR G
Sbjct: 371 RFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIHRCGRTGRIGHHG 430
Query: 596 TSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQ 498
+ +F T + + A++L +L+ Q I +L+
Sbjct: 431 IATSFLT-LDCKIAEELKEMLEVMEQPIPKELK 462
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 612
R E +F+ ILV TD+A+RGLD + +VINFD+PNS DYIHR+GRTGR
Sbjct: 735 RCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDYIHRVGRTGR 789
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R+ V + F++G LV +D+ RG+D+ + VINFD+P +SE Y+HRIGR+GR G
Sbjct: 330 RNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLG 389
Query: 596 TSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMADR 483
+ T + DL + E + I P + S+ D+
Sbjct: 390 VAINLITYDD---RFDLYKIENELDTEIKP-IPSVIDK 423
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R+ V + F++G LV +D+ RG+D+ + VINFD+P +SE Y+HRIGR+GR G
Sbjct: 330 RNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLG 389
Query: 596 TSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMADR 483
+ T + DL + E + I P + S+ D+
Sbjct: 390 VAINLITYDD---RFDLYKIENELDTEIKP-IPSVIDK 423
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R+ L F+EG+ LVATDVAARGLD+ I V+ + P + YIHR GRTGR+ +G
Sbjct: 343 REVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIHRSGRTGRAGREG 402
Query: 596 TSYAFFTP 573
F+ P
Sbjct: 403 ICIVFYKP 410
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 67.7 bits (158), Expect = 1e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Frame = -2
Query: 764 LYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 585
L +FK +L+ATDVAARGLD+ I++VI++ P E Y+HR GRT R+ +G S
Sbjct: 499 LDRFKASNTGLLLATDVAARGLDIANIEHVIHYQVPKDPEVYVHRSGRTARASHEGLSVV 558
Query: 584 FFTPSNSRQAKDLVSVLQEANQMISPQLQS 495
P + + + L A+ ++ QL+S
Sbjct: 559 LVGPEDLAHYRKTMKTLNNAS--LNKQLKS 586
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = -2
Query: 764 LYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 585
L +FK G ILVATDVA+RGLD+ ++ V+N + P +DYIHR+GRT R+ G + +
Sbjct: 290 LARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAIS 349
Query: 584 FFTPSNSRQAKDL 546
T + + K +
Sbjct: 350 MVTQYDIDRVKKI 362
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 64.5 bits (150), Expect = 9e-11
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R ++ F++ ILV TDV ARG+D+ + +VI +D P+S+ ++HR GRT R ++G
Sbjct: 129 RHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARIGNEG 188
Query: 596 TSYAFFTPSNSRQAKDLVSVLQE 528
+ F P+ D +S+ Q+
Sbjct: 189 NAVVFLLPTEDSYV-DFISINQK 210
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R E + + K IL++TD+ ARG+D + + V+N D P++ E Y+HRIGR GR ++G
Sbjct: 253 RLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRAGRFGTEG 312
Query: 596 TSYAFFTPSNSRQAKDL 546
+ + +N ++ ++L
Sbjct: 313 MAVTYV--ANGKEEREL 327
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR-SKSK 600
R ++F + IL+ TDVAARGLD+ + +++ +D + ++YIHR+GRT R ++ K
Sbjct: 857 RTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTARGTEGK 916
Query: 599 GTSYAFFTP 573
G + F P
Sbjct: 917 GHALLFLLP 925
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = -2
Query: 758 QFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 579
QFK +LVAT++ RG+D++ + V N+D P S+ Y+HR+ R GR +KG + F
Sbjct: 7 QFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 66
Query: 578 TPSNSRQAKDLVSV 537
S+ AK L V
Sbjct: 67 --SDEADAKTLNEV 78
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = -2
Query: 758 QFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 579
QFK +LVAT++ RG+D++ + V N+D P S+ Y+HR+ R GR +KG + F
Sbjct: 380 QFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 439
Query: 578 TPSNSRQAKDLVSV 537
S+ AK L V
Sbjct: 440 --SDEADAKTLNEV 451
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 624
RD ++ F+ G+ +L+AT++ RG+D G+ VIN+D+P S+ YIHRIG
Sbjct: 422 RDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIG 472
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 59.3 bits (137), Expect = 3e-09
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = -2
Query: 758 QFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 585
+F+ + ++V TDVAARG+D+ + VINF +P ++ ++HR+GR R+ GT+Y+
Sbjct: 520 KFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHRVGRVARAGRSGTAYS 577
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 58.8 bits (136), Expect = 5e-09
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSS------EDYIHRIGRTG 615
R VL +F+ G+ +L+ T+V+ARG+DV+ + VIN+D P E Y+HRIGRTG
Sbjct: 383 RIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFETYLHRIGRTG 442
Query: 614 RSKSKGTSYAFFTPSNS 564
R G + F S
Sbjct: 443 RFGKSGIAVNFIDGQRS 459
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
RD ++ +F+ G +L+ TD+ ARG+DV + VIN+D P++ E+YIHR +KS
Sbjct: 369 RDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHRCTDDDDTKS 426
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = -2
Query: 707 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQE 528
RG+D+ + VINFD+P +SE Y+HRIGR+GR G + T + DL + E
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDD---RFDLYKIENE 61
Query: 527 ANQMISPQLQSMADR 483
+ I P + S+ D+
Sbjct: 62 LDTEIKP-IPSVIDK 75
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = -2
Query: 707 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQE 528
RG+D+ + VINFD+P +SE Y+HRIGR+GR G + T + DL + E
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDD---RFDLYKIENE 61
Query: 527 ANQMISPQLQSMADR 483
+ I P + S+ D+
Sbjct: 62 LDTEIKP-IPSVIDK 75
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 621
R + +F +G +LVATDVA++GLD I++VINFD P E+Y+ G+
Sbjct: 126 RVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVLLCGQ 177
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 621
R + +F +G +LVATDVA++GLD I++VINFD P E+Y+ G+
Sbjct: 126 RVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVLLCGQ 177
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 764 LYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 591
L F+ G+ +LV T+ RGLD + +V + P + E+Y+H GR GR GT+
Sbjct: 471 LRDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTA 528
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
+++VL F++ + ++LVAT V GLDV +V+ FD+P + Y+ GR+++K
Sbjct: 133 QEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYVQ---SKGRARAKN 189
Query: 596 TSYAFFTPSNSRQAKDL-VSVLQEANQMISPQLQ 498
+++ + L V QE + + Q
Sbjct: 190 SAFIVLVEDKDSEWAGLEVERYQETENYLQEKCQ 223
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = -2
Query: 692 DGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMI 513
+ + VINFD P + E+Y+H+IGR GR + G S +F ++ L++ LQ +
Sbjct: 395 EAVSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISFINNASKGLFLQLINKLQPMGVKL 454
Query: 512 SPQLQSMA 489
+L A
Sbjct: 455 PDELTRSA 462
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2
Query: 749 EGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
E R ++VAT G+D +++VI+ + S E+Y GR GR + + + F+ P
Sbjct: 350 ESRSQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCIVFYRP 408
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -2
Query: 713 AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVL 534
A+RGLD+ + +VI D+ + +HR+GRT R+ S G F T + L +
Sbjct: 108 ASRGLDIPNVTHVIQLDFATDAAQMLHRVGRTARAGSHGKVVNFITKDDEELVNALRACD 167
Query: 533 QEANQ 519
+N+
Sbjct: 168 NNSNE 172
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIK 681
R E L +FK G ILVATD+AARGLD+ G+K
Sbjct: 47 RLEALQKFKNGEVDILVATDLAARGLDITGVK 78
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -2
Query: 770 EVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSK 606
EV+++F+ G + LV+T V GLD+ + ++ FD S + R+GRTGR +
Sbjct: 571 EVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIRLVQRMGRTGRKR 625
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
R +V +F G + AT GLD ++ +I+++ P S E Y+ IGR GR
Sbjct: 827 RRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYVQEIGRAGRDGKPS 886
Query: 596 TSYAFFTPSNSRQAKDL 546
+ F R+ +DL
Sbjct: 887 HCHVFL----DREGQDL 899
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 752 KEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSY 588
++G +L+AT G+D G+K VI++ S E YI GR GR S +Y
Sbjct: 343 QDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYIQETGRAGRDGSNSVAY 397
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
RD+V ++ EG+ +++ AT G+D +++V ++ P S E Y GR GR
Sbjct: 287 RDKVQQEWMEGKVAVICATISFGMGVDKGDVRFVAHWSLPQSMEGYYQESGRAGRDGQPS 346
Query: 596 TSYAFFT 576
F++
Sbjct: 347 YCRLFYS 353
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -2
Query: 776 RDEVLYQFK--EGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
+D +L FK +G +LVAT G+D G+ I+F + E +I GR GR
Sbjct: 215 KDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFIQETGRAGRDWK 274
Query: 602 KGTSYAFF 579
SY +
Sbjct: 275 SSFSYLLY 282
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = -2
Query: 776 RDEVLYQFKEGRX-SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSK 600
++EV+ +F+ G +I++AT VA GLD+D YVI +D + + GR R+K+
Sbjct: 604 QEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNEISSVQSRGRV-RTKTG 662
Query: 599 G 597
G
Sbjct: 663 G 663
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
++ +L F+ GR +L++T V GLDV V+ FD + + + GR R +
Sbjct: 606 QEVILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMNLKSLVQSRGRASR---RS 662
Query: 596 TSYAFFTPSNSRQAKDLVSV-LQEANQMISPQL 501
S+ SN ++ +++ + L+EAN S +L
Sbjct: 663 DSHFVVLCSNGKEKQEVDELKLKEANMKESMRL 695
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 770 EVLYQF--KEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 612
EVL +F + ++VAT G+D+ + ++I+F P+ E Y+ IGR GR
Sbjct: 300 EVLGEFIKSNSKIRVVVATCALGMGVDIPDVDHIIHFGIPSEVEHYVQEIGRGGR 354
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 776 RDEVLYQFK--EGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
+D +L FK +G +LVAT G+D G+ ++F + E +I G GR
Sbjct: 246 KDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHFGPSKNCEAFIQETGHAGRDGK 305
Query: 602 KGTSYAFF 579
SY +
Sbjct: 306 SSFSYLLY 313
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 767 VLYQFKEGRXSILVATDVAARGLDVDGIKYVINFD-YPNSSEDYIHRIGRTGRSKSKGTS 591
++ +FK+G +IL+AT VA GLD+ +VI +D Y N I GR ++
Sbjct: 990 IIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYDTYGNE----ISSTQARGRIRADQGQ 1045
Query: 590 YAFFTPSNSR 561
Y + + S+
Sbjct: 1046 YVYLADARSK 1055
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -2
Query: 701 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 576
L +D ++N D+ EDYIHR+GRT R+ G S F T
Sbjct: 111 LVMDEADRILNMDF--EKEDYIHRVGRTARAGRSGRSVTFVT 150
>SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05)
Length = 798
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 704 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLV 543
G+D ++YVI++ P S E Y GR GR K +++ + + + ++
Sbjct: 47 GIDKGDVRYVIHYSMPKSLEGYYQECGRAGRDGKKAECILYYSYGDMHRIRRMI 100
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 359 CNHCPPFGYSCQNCFRV*KSRHH 427
C CP F Y C+NCFRV +S H
Sbjct: 1199 CKTCPDFDY-CENCFRVRRSHRH 1220
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 32.7 bits (71), Expect = 0.34
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 704 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 612
G+D+ + ++I++ P+ E Y+ IGR GR
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEIGRGGR 32
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 659 PNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQ 531
P E Y IGR GR + Y F+ P + ++ L++ +Q
Sbjct: 233 PKDIESYYQEIGRAGRDGEPSSCYVFYKPGDFATSRYLINEMQ 275
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 734 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 576
++VAT+VA + +DGI Y S R GR GR ++ G +Y +T
Sbjct: 133 VIVATNVAEASITIDGIVYESLVVTEISQASAEQRAGRAGRVRA-GKAYRLYT 184
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = -2
Query: 770 EVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 591
EV+ +F+ L+AT+ G D + V + P + ++ GR GR+ + +
Sbjct: 1084 EVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFGRGGRAGNNAKA 1143
Query: 590 YAFF 579
++
Sbjct: 1144 IIYY 1147
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 770 EVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDY 660
++ + +G +VAT++A L VDGI +VI+ Y
Sbjct: 796 KIFQKAPDGVRKCVVATNIAETSLTVDGIMFVIDAGY 832
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 776 RDEVLYQFKEGRXSILVATDVA 711
R +VL QFK+ ILVATDVA
Sbjct: 768 RSKVLGQFKKREIPILVATDVA 789
>SB_10873| Best HMM Match : Exo_endo_phos (HMM E-Value=0.068)
Length = 1142
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -2
Query: 698 DVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQ 519
DVD ++ V +FD+ + + H I R RS S+ F P S + +L V Q A
Sbjct: 746 DVDFVR-VFSFDFSKAFDSVSHEIARLNRS----ISHLEFLPETSEWSLELPKV-QRAGS 799
Query: 518 MISPQ 504
+I +
Sbjct: 800 LIEAE 804
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,180,522
Number of Sequences: 59808
Number of extensions: 406736
Number of successful extensions: 876
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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