Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G24
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   100   6e-23
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    24   6.0  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   8.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  100 bits (239), Expect = 6e-23
 Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = -2

Query: 776 RDEVLYQFKEGRXSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
           R+  LY FK GR  +L+AT VAARGLD+  + +V+N+D P S +DY+HRIGRTGR  +KG
Sbjct: 462 REMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIGRTGRVGNKG 521

Query: 596 TSYAFFTPSNSR-QAKDLVSVLQEANQMI 513
            + +F+ P   R  A DLV +L +A Q +
Sbjct: 522 RATSFYDPEADRAMASDLVKILTQAGQSV 550


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query: 287 LSILRGFTLL---EMPTKILFNSRQIVCNHCPPFGY 385
           +++LR F      + P KI+F+ +  + +  PP  Y
Sbjct: 466 ITLLRNFRFTPSSQTPAKIVFDPKSFILSPVPPVNY 501


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 636 PSYWENWTFKIKRNI 592
           PS W  W+  +KR +
Sbjct: 219 PSLWNKWSLSVKRRL 233


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 HHLVHLRRICSCSTRRHHHRN 484
           HHL H     + +T  HHH++
Sbjct: 707 HHLSHHHGGAAAATGHHHHQH 727


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,085
Number of Sequences: 2352
Number of extensions: 14353
Number of successful extensions: 234
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)