Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G23
(707 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 91 8e-19
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 47 1e-05
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 43 3e-04
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 36 0.024
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 33 0.22
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 32 0.39
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 31 0.90
10_01_0131 - 1541964-1542161,1542235-1542390,1543046-1543923,154... 31 0.90
06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867 31 0.90
02_05_0114 + 25958834-25961296 31 0.90
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 31 1.2
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 29 2.7
07_01_0586 - 4354613-4354996,4355537-4355662,4355752-4355827,435... 29 2.7
09_04_0088 + 14494711-14494931,14496309-14496399,14496496-144965... 29 3.6
02_03_0120 + 15463163-15465250 29 3.6
10_06_0130 - 11055305-11055593,11055666-11055949,11057271-110573... 29 4.8
08_02_1040 - 23873354-23874509,23875645-23875796 29 4.8
06_01_0005 - 125809-126339 29 4.8
01_06_1293 - 36050847-36051304,36052343-36052826 29 4.8
01_01_1125 - 8920590-8924372 29 4.8
01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942 29 4.8
09_01_0019 + 403078-404211 28 6.3
06_03_1159 + 28084786-28085428,28085520-28086166 28 6.3
05_03_0099 + 8382050-8382484 28 6.3
04_01_0127 + 1368763-1369276,1385539-1385742,1386221-1386444,138... 28 6.3
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 28 6.3
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 28 8.4
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 8.4
06_01_0809 - 6100025-6100251,6100456-6100565,6100919-6100986,610... 28 8.4
04_03_0266 + 13648287-13649099,13649186-13649524 28 8.4
03_06_0741 + 35893538-35895600,35896274-35896474,35896701-358968... 28 8.4
02_04_0441 + 22960933-22961559 28 8.4
01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918 28 8.4
01_05_0775 + 25069960-25070023,25070896-25071263 28 8.4
>12_02_0768 -
22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 91.1 bits (216), Expect = 8e-19
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Frame = -1
Query: 584 RRYVALTKRKEPAVPRALADYIVSSYVELRRE-ARNARDVTFTSARNXXXXXXXXXXXXX 408
R Y++ +R P+VPR L +YI ++Y +R+E A++ ++T+ R
Sbjct: 496 RAYISTARRVVPSVPRELEEYIATAYSSIRQEEAKSNAPHSYTTIRTLLSILRISIALAR 555
Query: 407 XXLSDVVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKT--VK 234
S+ V + DV EA+RL++MSK SL + ++ + G+ + I++I+RD A + V+
Sbjct: 556 LRFSETVAQSDVDEALRLMQMSKYSL-YSDDRQRSGLDAISDIYSILRDEAARTNSMDVR 614
Query: 233 VADVIERCVDKGFKPDQVDACIEEYENLNVWQVNQVRTKITFM 105
A + KG+ Q+ C+EEY +LNVWQ++ I F+
Sbjct: 615 YAHALNLISRKGYSEAQLKECLEEYASLNVWQIHPNTFDIHFI 657
>01_05_0265 + 20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Frame = -1
Query: 707 WXIQDKPNREKDLELAKHIAYVHQHSTQPPSSVRALSMKLVRRYVALTKRK-EPAVPRAL 531
+ I DK + + D LAKHI +H + + L + + Y++ ++ +P +
Sbjct: 632 YLILDKADEQTDRRLAKHIVSLHFENPN-IEELEVLDLPTLVAYISYARKHIQPQLSDEA 690
Query: 530 ADYIVSSYVELRREAR---NARDVTFTSARNXXXXXXXXXXXXXXXLSDVVEKEDVSEAI 360
A+ + YVE+R+ + + V +AR S++VE +DV EA
Sbjct: 691 AEELTRGYVEMRKRGNSPGSRKKVITATARQIESLIRLSEALARMRFSEMVEVQDVVEAF 750
Query: 359 RLVEMSKQ 336
RL+E++ Q
Sbjct: 751 RLLEVAMQ 758
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = -1
Query: 695 DKPNREKDLELAKHIAYVHQHSTQPPSSVRALSMKLVRRYVALTKRKEPAVPRALADYIV 516
D+P+ D +A HI VHQ + + A S ++RY+A K +P + +V
Sbjct: 541 DEPDENTDYHIAHHIVRVHQKREE--ALAPAFSTAELKRYIAFAKSLKPQLSSEAKKVLV 598
Query: 515 SSYVELRR 492
SYV LRR
Sbjct: 599 ESYVTLRR 606
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 36.3 bits (80), Expect = 0.024
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +1
Query: 412 ASAVERRSIASKFLADVNVTSRAFLASRRSSTYEETM*SASARGTAGSLRLVSAT*RRTS 591
A A RR +AS+F + +A +S R T +++A GTA + R SA RR+S
Sbjct: 32 APAGRRREVASRFKSGGTPAPQAAASSVRRCTSPSLSRASAAEGTASTNRAQSAERRRSS 91
Query: 592 FMDSARTLLGG 624
S+ T GG
Sbjct: 92 TPSSSSTPSGG 102
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 33.1 bits (72), Expect = 0.22
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = -2
Query: 637 STRPSRPAASARCP*SWSGATW----RSPSARSPPCRARS-PTTSSLHTSSYGVKLETHV 473
ST + PAA+ R + AT R P + P AR+ P T++ ++ T
Sbjct: 80 STSAAAPAAATRKASGVAAATTGVLPRKPPGTTAPVAARNIPATTAASRTATRATTTTTA 139
Query: 472 TSRSRRPGTCSQYCASRPHSQGSDYQTS 389
TS SRRP + ASR + +D T+
Sbjct: 140 TSVSRRPAAAAAAVASRIPLRATDATTT 167
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 32.3 bits (70), Expect = 0.39
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = -1
Query: 602 LSMKLVRRYVALTKRK-EPAVPRALADYIVSSYVELRREARNARDVTFT---SARNXXXX 435
L++K +++Y+ K +P + +D+I +SY ELR NA+ T +AR
Sbjct: 580 LTVKFLKKYIHYAKNLIQPRLTDEASDHIATSYAELRDGGANAKSGGGTLPITARTLETI 639
Query: 434 XXXXXXXXXXXLSDVVEKEDVSEAIRLVEMS--KQSLQHVEENVQR 303
L V K DV A++++ + + L +EE QR
Sbjct: 640 IRLSTAHAKMKLRHEVLKTDVEAALQVLNFAIYHKELTEMEEREQR 685
>11_06_0621 + 25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1
Query: 320 EENVQRGITSTDRIF-AIVRDLAGSNKTVKVADVIERCVDKGFKPDQV 180
+E +Q+G+T + A++ + K D+++ +DKG +PD++
Sbjct: 872 DEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 919
>10_01_0131 -
1541964-1542161,1542235-1542390,1543046-1543923,
1544060-1544135,1544162-1544191
Length = 445
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Frame = -2
Query: 556 RSPPCRARSPTTSSLHTSSYGVKLETHVTSRSRRPGTCSQYCASRPHSQGSDYQTSLKRR 377
R+PP R +P T + + + T T + R T + H+ G D ++L
Sbjct: 13 RAPPVRRNAPVTPAATRAPPATRASTRTTCSTERHRTDGRVMMEPAHAPGRDRLSALPDN 72
Query: 376 TYLR--QFVSWRCQSNPC---NTWKKTFRGV*RQRTVYSR*C 266
R F++ R C W+ +R + R Y+ C
Sbjct: 73 VLRRIMSFLNARQSVQTCVLSRRWRHLWRSLPRINADYTEFC 114
>06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867
Length = 237
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = -3
Query: 339 AIPATRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGG 178
A P RGR+R G + R+ R R Q DR GRC RR+ R G
Sbjct: 5 AAPGRRGRRRQPGCQIRQG--REGRRGRRRQTDRGEGRCGCGRRREGKWPRPDG 56
>02_05_0114 + 25958834-25961296
Length = 820
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1
Query: 320 EENVQRGITSTDRIF-AIVRDLAGSNKTVKVADVIERCVDKGFKPDQV 180
+E +Q+G+T + A++ + K D+++ +DKG +PD++
Sbjct: 754 DEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 801
>11_04_0331 + 16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = -1
Query: 602 LSMKLVRRYVALTKRKE-PAVPRALADYIVSSYVELRREARNARDVTFTSARNXXXXXXX 426
LS ++++Y+ K P + A D I Y ELRRE+ + + V + R+
Sbjct: 768 LSQDMLKKYITYAKLNVFPKIHDADLDKISHVYAELRRESSHGQGVPI-AVRHIESIIRM 826
Query: 425 XXXXXXXXLSDVVEKEDVSEAIRLV 351
L V +EDV AIR++
Sbjct: 827 SEAHARMHLRSYVSQEDVDMAIRVL 851
>09_04_0593 -
18825741-18826702,18826994-18827875,18828687-18828775,
18828942-18829080,18829405-18829531,18829629-18829838
Length = 802
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2
Query: 565 PSARSPPCRARSPTTSS 515
P RS PCRARSP++SS
Sbjct: 50 PHTRSLPCRARSPSSSS 66
>07_01_0586 -
4354613-4354996,4355537-4355662,4355752-4355827,
4356444-4356651,4356813-4356906,4357430-4357504,
4358200-4358622
Length = 461
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/117 (21%), Positives = 49/117 (41%)
Frame = -1
Query: 581 RYVALTKRKEPAVPRALADYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXX 402
+ V ++ A+P + V+S + + N + F++A N
Sbjct: 343 KMVTGARQLHQAIPDMQSPLNVNSDASVPIQNNNPMNY-FSNANNAGVNSFMHQVSPAFQ 401
Query: 401 LSDVVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKV 231
+ D VEK D ++ ++L + SLQH++ G S++ A L +N+ V +
Sbjct: 402 IVDSVEKIDPTDPVQLQQQQMASLQHLQNRACGGGASSNEYTAWGSSLMDANELVNM 458
>09_04_0088 +
14494711-14494931,14496309-14496399,14496496-14496571,
14496671-14496755,14497381-14497450,14499111-14499316,
14499434-14499508,14501043-14501133,14501400-14501441,
14501661-14501741,14502010-14502089,14502254-14502365
Length = 409
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 587 PASWTARGRCWAAGSSAGAHT--LCASPALSLSRDWVY 694
P +W GR W AG A AH LC + L+L D ++
Sbjct: 35 PVTW---GRVWRAGQEAAAHALLLCFTALLALKLDGLF 69
>02_03_0120 + 15463163-15465250
Length = 695
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 167 RCKRPPDLV*ILCXXXXXXXXXXXXSCWSRPGRALSRIY--GPLTLYPSERFLPRVAGIA 340
RC+R P L+ IL S + P + RI LTL S LP AG+A
Sbjct: 4 RCRRLP-LLFILLLAVRPLSAAAASSIAAAPASSYRRISWASNLTLLGSASLLPGAAGVA 62
Query: 341 LTSP 352
LT+P
Sbjct: 63 LTTP 66
>10_06_0130 -
11055305-11055593,11055666-11055949,11057271-11057398,
11058522-11058606,11058917-11060872
Length = 913
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLHRRIRELER 145
++ S G+ + +R++GRC R RR+ Q G +L R IR L R
Sbjct: 691 VKPSCPAGKDRCERKTGRCWRAARRRPGQ--GGEQLERIIRALVR 733
>08_02_1040 - 23873354-23874509,23875645-23875796
Length = 435
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 599 TARGRCWAAGSSAGAHTLCA 658
T RG AA S+A AHT+CA
Sbjct: 73 TVRGHSSAAASAAAAHTICA 92
>06_01_0005 - 125809-126339
Length = 176
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 276 RDSAR-PGRLQQDRQSGRCHREVRRQRIQTRSGGRLHRR 163
RD R P R R RCHR RR+ + R GG R
Sbjct: 138 RDPGRVPARGGDPRDQWRCHRRWRRRARRGRGGGTTRSR 176
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 643 CTSTRPSRPAASARCP*SWSGATWRSPSARSPP 545
C + P+ P+ASA SW + SPS+ +PP
Sbjct: 271 CAAVSPTTPSASASF--SWESESSDSPSSEAPP 301
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 649 RMCTSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPTTSS 515
RM +RP+RP+ S C + GA+ +PS P A + ++
Sbjct: 40 RMSAMSRPARPSRSIACATCFGGASPLAPSCWCPVAPAAAAAAAA 84
>01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942
Length = 1020
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 546 GGLLALGERHVAPDQLHGQRADAAGRLGRVLV 641
G L L +++ +QLHG+ A GRL R+LV
Sbjct: 89 GNLTFLRRLNLSSNQLHGEIPPAVGRLRRLLV 120
>09_01_0019 + 403078-404211
Length = 377
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -3
Query: 318 RKRSEGYNVNGPYIRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLHRRIRELER 145
RKR E + + D R + ++DR+ R HR + SGG RR R +R
Sbjct: 257 RKRHERSDEDSESDSDKKRHRKSRKDRKRRRSHRRSDDTSDEDESGGEDRRRRRHRKR 314
>06_03_1159 + 28084786-28085428,28085520-28086166
Length = 429
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 180 GRLHRRIRELERVASEPGAD 121
GR+HR + L+ VA++PG D
Sbjct: 377 GRIHRPLENLQEVAAQPGFD 396
>05_03_0099 + 8382050-8382484
Length = 144
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 342 KAIPATRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSGRCHREV--RRQRIQTRSGG 178
K + RG +R + P +RD R R + RQ G RE +R+R RSGG
Sbjct: 79 KGMRCLRGSRRMRWEALAPPPVRDERR--RRRATRQQGEAAREPLEKRRREAARSGG 133
>04_01_0127 +
1368763-1369276,1385539-1385742,1386221-1386444,
1386520-1386707,1394955-1394970
Length = 381
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = -2
Query: 532 SPTTSSLHTSSYGVKLETHVTSRSRRPGTCSQYCASRPHSQGSDYQTSLKRRTYLRQFVS 353
S L ++ + L H+ SR+ R C S P G D TS KR+ + +
Sbjct: 183 SKMVGGLTSAEFARLLSRHLDSRANRVHFCKLPGRSIPTKAGDDVGTSKKRKRAVAKARR 242
Query: 352 W 350
W
Sbjct: 243 W 243
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 299 YPSERFLPRVAGIALTSPRDELPQIRPPFQRR 394
+P E PRV +A R+ PQIRPP +RR
Sbjct: 1070 FPVEEKRPRV--VAEAQERETGPQIRPPCRRR 1099
>07_01_0010 +
72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -1
Query: 395 DVVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIF-AIVRDLAGSNKTVKVADVI 219
DVV + + M ++++ ++ + +G D + I+ + + +++
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313
Query: 218 ERCVDKGFKPDQVDAC 171
+ V KGF PDQV C
Sbjct: 314 KDAVFKGFVPDQVTYC 329
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = -1
Query: 248 NKTVKVADVIERCVDKGFKPDQVDACIEEYENLNVWQVNQVRTKI 114
+ + ++AD + + KG D +D C+E + L+ ++VR +
Sbjct: 3725 DSSAQIADCEDLLLRKGTTVDDLDGCVEGHSGLSTHSNDEVRNLV 3769
>06_01_0809 -
6100025-6100251,6100456-6100565,6100919-6100986,
6101108-6101229,6101446-6101527,6101629-6101695,
6102811-6102883,6103032-6103148,6104167-6104259,
6104430-6104495,6105121-6105218,6105917-6106016,
6106486-6106660,6106828-6106894,6107574-6107712,
6107830-6107926,6107992-6108130,6108212-6108363
Length = 663
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = -1
Query: 695 DKPNREKDLELAKHIAYVHQHS----TQPPSSVRALSMKLVRRYVALTKRKEPAVPRALA 528
D N++ D ++ HI + T P + LSM +RRY+ K+ V A
Sbjct: 512 DTKNKKWDKIVSSHILAENTEEKKGKTSDPEVMWTLSM--LRRYIHYVKQHFKPVLTKEA 569
Query: 527 DYIVSSYVELRREA--RNA 477
+ ++SSY + +R++ RNA
Sbjct: 570 ERVISSYYQRQRQSGTRNA 588
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 336 IPATRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSGRCHREV 211
I R +R G GP IR A+P QS C R++
Sbjct: 282 IAQRRSPRRQTGQGSGGPKIRSEAQPNTSNPAGQSDSCKRKL 323
>03_06_0741 +
35893538-35895600,35896274-35896474,35896701-35896814,
35897570-35897649,35897772-35897896,35898008-35898079
Length = 884
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 338 QSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVA-DVIERCVDKGFKPD 186
++LQ E V+ GI + IV G ++ A DV+E + KG KPD
Sbjct: 440 RALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 491
>02_04_0441 + 22960933-22961559
Length = 208
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 646 MCTSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPTTSSLHTSSYGVKL 485
M +S R A S+ +WS WR+P A P RA LH+ + + L
Sbjct: 11 MASSRADGREARSSAAAVTWS---WRAPVATPPAARAPPVGAPPLHSWRHPITL 61
>01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918
Length = 250
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 240 RQSGRCHREVRRQRIQTRSGGR 175
R+SGRC R +R QR R G R
Sbjct: 158 RRSGRCQRGLRSQRCTAREGFR 179
>01_05_0775 + 25069960-25070023,25070896-25071263
Length = 143
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 605 RGRCWAAGSSAGAHTLCASPALSLSRDWVYPV 700
R + WA S H ASPA S SR W P+
Sbjct: 29 RLKVWAFVSDVRGHWASASPAQSWSRGWRCPL 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,288,641
Number of Sequences: 37544
Number of extensions: 411277
Number of successful extensions: 1701
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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