Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G23
(707 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 155 3e-38
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_1878| Best HMM Match : DUF1103 (HMM E-Value=0.56) 34 0.13
SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_52559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 30 2.1
SB_50314| Best HMM Match : MCPsignal (HMM E-Value=1.6e-11) 30 2.1
SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08) 29 2.8
SB_23439| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.00066) 29 2.8
SB_55416| Best HMM Match : D123 (HMM E-Value=0) 29 3.7
SB_36269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 29 4.9
SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06) 29 4.9
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_27880| Best HMM Match : Activin_recp (HMM E-Value=5.1) 28 8.5
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 8.5
SB_51094| Best HMM Match : VWA (HMM E-Value=0) 28 8.5
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 155 bits (376), Expect = 3e-38
Identities = 78/158 (49%), Positives = 101/158 (63%)
Frame = -1
Query: 707 WXIQDKPNREKDLELAKHIAYVHQHSTQPPSSVRALSMKLVRRYVALTKRKEPAVPRALA 528
W IQDKP++E DL LA+HI YVHQHS PPS L M L+RRY+A K K+P VP L+
Sbjct: 957 WLIQDKPDKENDLRLAQHITYVHQHSAHPPSHYDPLDMNLMRRYIAACKEKQPIVPGELS 1016
Query: 527 DYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXXLSDVVEKEDVSEAIRLVE 348
DYIVS+YVE+R++ARN D TFTSAR + EKEDV+EA+RL+E
Sbjct: 1017 DYIVSAYVEMRKDARNNHDTTFTSARTLLAVLRLATALRT-----LSEKEDVNEAMRLME 1071
Query: 347 MSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVK 234
MSK SL +E R + D I+ I++++AG +VK
Sbjct: 1072 MSKASLSD-DEGTVRVVDPVDAIYGIIKEIAGDASSVK 1108
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -1
Query: 701 IQDKPNREKDLELAKHIAYVHQHSTQPPSSVRA-LSMKLVRRYVALTKRK-EPAVPRALA 528
++D+ N+ KD+ LAKH+ VH ++ Q + LS+ +++Y++ K K P + + A
Sbjct: 534 VKDEHNQAKDIHLAKHVMQVHLNAAQTTQANEGELSLSFLKKYISYCKSKCGPRLSESAA 593
Query: 527 DYIVSSYVELRREAR 483
+ + + YV +R A+
Sbjct: 594 EKLKNRYVLMRSGAK 608
>SB_1878| Best HMM Match : DUF1103 (HMM E-Value=0.56)
Length = 260
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = -1
Query: 383 KEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVD 204
K+ V +AIR + +Q+++ ++ V++ I S DRI +R + ++ D +E+ +
Sbjct: 171 KDRVEQAIRSKDRVEQAIRS-KDRVEQAIRSKDRIEQAIRSKDRVEQAIRSKDRVEQAIR 229
Query: 203 KGFKPDQV 180
+GF Q+
Sbjct: 230 RGFLNGQM 237
>SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 602 LSMKLVRRYVALTKRKEPAVPRALADYIVSSYVELRREARNARD 471
+SM +++Y+ + K +PA+ + AD I +Y ELR + D
Sbjct: 352 VSMAFMKKYIHVAKAIKPALTKPAADLISKAYSELRDQENIGND 395
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.5 bits (68), Expect = 0.69
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = -2
Query: 703 SYRINPIARKT*SWRST*RMCTSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPT 524
SY P T S+ ST TST P S C S++ T + + P + +PT
Sbjct: 25 SYTSTPSYTCTTSYTST-PSYTSTTSYTPTPSYTCTTSYTSTTSYTSTTSYTPTTSYTPT 83
Query: 523 TSSLHTSSY 497
TS T+SY
Sbjct: 84 TSYTPTTSY 92
Score = 31.1 bits (67), Expect = 0.92
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -2
Query: 703 SYRINPIARKT*SWRST*RMCTSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPT 524
SY P T S+ ST T T P S C S++ T +P+ P + + T
Sbjct: 97 SYTPTPSYTCTTSYTST-TSYTPTTSYTPTTSYTCTTSYTSTTSYTPTTSYTPTTSYTLT 155
Query: 523 TSSLHTSSYGVKLE-THVTS 467
TS T+SY TH TS
Sbjct: 156 TSYTCTTSYTCTTSYTHTTS 175
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 31.1 bits (67), Expect = 0.92
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = -3
Query: 342 KAIPATRGRKRSEG-YNVNGPYIRDSARP--GRLQQDRQSG--RCHREVRRQRIQTRSGG 178
+++P GR R EG Y +G Y R GR++ R+ G R E+ R+ + R
Sbjct: 987 RSVPDVGGRSRMEGGYVSDGGYRRRDEEDTIGRVRGRRERGESRSREEIMREE-EERERR 1045
Query: 177 RLHRRIRELERVASEPGADQD 115
RR RE ER+A + D +
Sbjct: 1046 EADRR-REEERIAEQKRRDDE 1065
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/63 (36%), Positives = 29/63 (46%)
Frame = -3
Query: 354 RGDVKAIPATRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGR 175
+GD + +RG +RS G N N RD R DR GR E RR ++RS R
Sbjct: 240 QGDYRGRDRSRGYERSRGQNYN--RYRDDDRSRDRHLDRPRGRSRDEGRRDE-RSRSRER 296
Query: 174 LHR 166
R
Sbjct: 297 RTR 299
>SB_52559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = -2
Query: 634 TRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPTTSSLHTSSYGVKLET--HV--TS 467
T P + +C +W + + + PP + P ++T+ G T HV T
Sbjct: 33 THPCEGSPDLKCGGTWRNSVYAVEAEVKPPLQ---PGHEYMYTNPQGSAPLTRDHVIYTE 89
Query: 466 RSRRP-GTCSQYCASRPHSQGSDY 398
+S R TCSQYC P Q ++
Sbjct: 90 KSVRDVNTCSQYCELMPDCQSINF 113
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/72 (30%), Positives = 42/72 (58%)
Frame = -1
Query: 392 VVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIER 213
V++KE++S R+ + +SL +++N G T+ D I ++ G +K V + ++E
Sbjct: 431 VMKKENLSPVCRVNNPTTKSLACLKKN--NGKTAED----IAAEM-GIDKDV-IVPLLED 482
Query: 212 CVDKGFKPDQVD 177
C ++G P+QVD
Sbjct: 483 CPEEGLNPNQVD 494
>SB_50314| Best HMM Match : MCPsignal (HMM E-Value=1.6e-11)
Length = 367
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 380 EDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAG 252
E V E +++V + L HV EN+ T ++RI +IV+ + G
Sbjct: 216 ETVEETMQVVRGIAEELTHVSENIGALNTQSERISSIVQVIRG 258
>SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08)
Length = 1185
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 254 GSNKTVKVADVIERCVDKGFKPDQVDACIEEYENLNVWQVN 132
GS+ + ++I + FKP Q ++ Y NLNV+ +N
Sbjct: 149 GSDHVTRAFEIILNTIK--FKPQQAIEDVDHYRNLNVYDIN 187
>SB_23439| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.00066)
Length = 417
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 698 QDKPNREKDLELAK---HIAYVHQHSTQPPSSVRALSMKLVRRYVALT 564
+D+ NR DL K + YVH+ S PPS + + + RR AL+
Sbjct: 165 KDQYNRMVDLPYTKPNSSLQYVHRESNHPPSITKNIPAGINRRLSALS 212
>SB_55416| Best HMM Match : D123 (HMM E-Value=0)
Length = 329
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 113 LSWSAPGSLATRSSSRILRCKRPPDLV*IL 202
L+WSAP + S LRCK P D+ +L
Sbjct: 104 LNWSAPKDASWISHDNTLRCKSPGDIYLLL 133
>SB_36269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = -1
Query: 680 EKDLELAKHI-----AYVHQHSTQPPSSVRALSMKLVRRYVALTKRKEPAVPRALAD-YI 519
+KD +LAKHI + + ST+ PS + KL+ + + +P P ++ D YI
Sbjct: 21 DKDFKLAKHIPLLRPRFTNDASTRTPSQKKNRRNKLLASGKSRDSKMKPKTPSSVPDLYI 80
Query: 518 VSSYVELR 495
+ EL+
Sbjct: 81 LIGVGELK 88
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -3
Query: 276 RDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLHRRIRELERVASEPGADQDN 112
R R + Q+ RQ R R+ +RQR + R R +R+R+ +R + D DN
Sbjct: 59 RQRQRQRQRQRQRQRQR-QRQRQRQRQRQRQRLRQRQRLRQRQRQRQQQRNDNDN 112
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -3
Query: 276 RDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLHRRIRELERVASEPGADQDN 112
R R + Q+ RQ R R+ +RQR + R RL +R R+ ++ ++ D DN
Sbjct: 63 RQRQRQRQRQRQRQRQR-QRQRQRQRQRLRQRQRLRQRQRQRQQQRNDNDNDNDN 116
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 695 DKPNREKDLELAKHIAYVHQHSTQPPSSVRALSMKLVRRYVALTKRKE 552
+K ++KD A+ AY+HQ T+ +A+ +L ALTK+ E
Sbjct: 621 EKEIQKKDKIYAEQKAYLHQLETEDAKIRQAVDQELDNEMSALTKQLE 668
>SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06)
Length = 1826
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 653 IAYVHQHSTQPPSSVRALSMKLVRRYVALTKRKE 552
+ YVH+ S PP+ + +S + +R L+ KE
Sbjct: 721 LQYVHRESNNPPTITKNISASINKRLSTLSSNKE 754
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = -3
Query: 363 NSSRGDVKAIPATRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSGRCHREVRRQRIQTRS 184
NS A+ T+G KRSE +V+ RD +++RQS H E QR+ S
Sbjct: 986 NSRSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRDSAKKERQS---HSE-SPQRVTKSS 1041
Query: 183 GGRLHRRIRELER 145
R +R R R
Sbjct: 1042 KERPRKRPRHQSR 1054
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -2
Query: 568 SPSARSPPCRARSPTTSSLHTSSYGVKLETHVTSRSRRPGTCSQYCASRPHSQGSDYQTS 389
+P+ PPC + T H Y + +T R + RPH QG Y+T
Sbjct: 205 APAPCMPPCH--TVQTVHQHAEGYTTRAKTTRPGRGYTTRAKATRPRRRPHDQGKSYKTR 262
Query: 388 LK 383
K
Sbjct: 263 EK 264
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.9 bits (59), Expect = 8.5
Identities = 27/105 (25%), Positives = 45/105 (42%)
Frame = -2
Query: 703 SYRINPIARKT*SWRST*RMCTSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPT 524
SY T S+ ST TST P S S++ T + + P + +PT
Sbjct: 7 SYTSTTSYTTTTSYTST-TSYTSTTSYTPTPSYTPTTSYTSTTSYTSTTSYTPTPSYTPT 65
Query: 523 TSSLHTSSYGVKLETHVTSRSRRPGTCSQYCASRPHSQGSDYQTS 389
TS T+SY ++ T+ S P T Y ++ ++ + Y ++
Sbjct: 66 TSYTTTTSY-TSTTSYTTTTSYTPTT--SYTSTTSYTSTTSYTST 107
>SB_27880| Best HMM Match : Activin_recp (HMM E-Value=5.1)
Length = 415
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/75 (28%), Positives = 29/75 (38%)
Frame = -2
Query: 556 RSPPCRARSPTTSSLHTSSYGVKLETHVTSRSRRPGTCSQYCASRPHSQGSDYQTSLKRR 377
+ P R +P T LH S Y + T V + P TC R Q S Y ++ R
Sbjct: 135 KHPYTRLYTPRTF-LHVSVYTKNISTRVCIHQKHPYTC--LYTPRTSLQVSVYTKNIPTR 191
Query: 376 TYLRQFVSWRCQSNP 332
+ Q + C P
Sbjct: 192 VCIHQEHPYTCLYTP 206
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 637 STRPSRPAASARCP*-SWSGATWRSPSARSPPCRARSPTTSSLHTSSYG-VKLETHVTSR 464
S + S + +R P S S RSP P R+RSP +S + SS K +H SR
Sbjct: 226 SRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRSPRSSKRYRSSRSHRKHRSHSRSR 285
Query: 463 SRR 455
S R
Sbjct: 286 SPR 288
>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
Length = 3544
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 314 NVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQV 180
N+ G+ D FAI + KT++ A +I + V+K + D+V
Sbjct: 2805 NIPDGLPELDITFAISATTQNATKTIEQAKLIIQSVEKYYGTDKV 2849
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,797,486
Number of Sequences: 59808
Number of extensions: 461029
Number of successful extensions: 1904
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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