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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G23
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    24   1.2  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    24   1.2  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    24   1.2  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   1.2  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    24   1.2  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   1.2  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   1.2  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   1.2  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    24   1.2  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    24   1.2  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    24   1.2  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    24   1.2  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    24   1.2  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    24   1.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   1.2  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    24   1.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    24   1.2  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    24   1.6  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    24   1.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.1  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   2.8  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   2.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   2.8  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   2.8  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   2.8  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    23   2.8  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   2.8  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   2.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.7  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   5.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.0  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   6.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   6.6  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.7  

>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLTKKMILEYELRRIREIEKLGSE 78


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYEIRRIREIEKLGSE 78


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R++    +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSE 78


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 293 STDRIFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQ 183
           + +++ +  R+L   + T  V ++IE+CV K    D+
Sbjct: 72  NVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADEDE 108


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 293 STDRIFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQ 183
           + +++ +  R+L   + T  V ++IE+CV K    D+
Sbjct: 72  NVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADEDE 108


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = -3

Query: 363 NSSRGDVKAIPATRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSGRCHREVRRQRI 196
           +S++  V   P    RKR      N      +A   + +  R+SG    E++ QR+
Sbjct: 201 SSTKSYVLEGPRNGKRKRKSSTIENESETESNASSTKTKMRRKSGATFEEIQNQRV 256


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 559 ARSPPCRARSPTTSSLHTSSYGVKLET 479
           +RSP  R RS T+++  T     KLE+
Sbjct: 82  SRSPDSRDRSSTSNTSKTVILSNKLES 108


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 279 IRDSARPGRLQQDRQSGRCHREVRRQRIQTRSGGRLH---RRIRELERVASE 133
           +R   +  RLQ  R+     +E  R+  +      L    RRIRE+E++ SE
Sbjct: 27  LRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKLGSE 78


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 580 RRTSFMDSARTLLGGWVECWCTYAMCFASS 669
           R T    +   ++GG+V CW  + + + ++
Sbjct: 300 RETKTAGTLAVVVGGFVACWLPFFILYLAT 329


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 199 PLSTHLSMTSATLTVLLEPARSRTIANIRSVDVIPL 306
           P++     T+  L     P+R+ T++    ++VIPL
Sbjct: 335 PITQSNKRTAGNLATREHPSRNFTMSEDGMIEVIPL 370


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 241 VLLEPARSRTIANIRSVDVIP 303
           ++ EP+  R    IRS DVIP
Sbjct: 515 LVYEPSACRPRHEIRSTDVIP 535


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 571 RSPSARSPPCRARSPTTSSLHTSSYGVK 488
           +SP  RSPP  + S     +H S   V+
Sbjct: 465 KSPVLRSPPAFSHSRCPPEIHKSCICVR 492


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 571 RSPSARSPPCRARSPTTSSLHTSSYGVK 488
           +SP  RSPP  + S     +H S   V+
Sbjct: 465 KSPVLRSPPAFSHSRCPPEIHKSCICVR 492


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +1

Query: 625 WVECWCTYAMCFASSKSFSR 684
           W+  W  +  C A  +SF +
Sbjct: 422 WIPKWRQFLYCLAGDESFRK 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,648
Number of Sequences: 438
Number of extensions: 4046
Number of successful extensions: 48
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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