Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G22
(670 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 271 4e-73
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 270 5e-73
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 269 1e-72
SB_56| Best HMM Match : Actin (HMM E-Value=0) 269 1e-72
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 269 2e-72
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 267 5e-72
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 242 2e-64
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 86 2e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 83 3e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 8e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.49
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 31 0.85
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.5
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 4.5
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 6.0
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 7.9
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 271 bits (664), Expect = 4e-73
Identities = 125/134 (93%), Positives = 129/134 (96%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVITIG ERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYANTVMSG
Sbjct: 216 LPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSG 275
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 276 GTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 335
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 336 YDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 270 bits (663), Expect = 5e-73
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVITIG ERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SG
Sbjct: 205 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 264
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 265 GTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 324
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 325 YDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 269 bits (660), Expect = 1e-72
Identities = 123/134 (91%), Positives = 129/134 (96%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVITIG ERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SG
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
G+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 269 bits (660), Expect = 1e-72
Identities = 123/134 (91%), Positives = 129/134 (96%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVITIG ERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SG
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 301
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
G+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 302 GSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 269 bits (659), Expect = 2e-72
Identities = 123/134 (91%), Positives = 129/134 (96%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVITIG ERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SG
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
G+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 267 bits (655), Expect = 5e-72
Identities = 122/134 (91%), Positives = 129/134 (96%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVITIG ERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SG
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 301
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
G+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 302 GSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 242 bits (592), Expect = 2e-64
Identities = 108/134 (80%), Positives = 123/134 (91%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVI+IG ERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIRKDLY+N V+SG
Sbjct: 16 LPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSG 75
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
G+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLSTFQQMWI+KEE
Sbjct: 76 GSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEE 135
Query: 309 YDESGPGIVHRKCF 268
Y E GP IVHRKCF
Sbjct: 136 YHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 95.5 bits (227), Expect = 3e-20
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 29/154 (18%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDG+V+ + ERF PEALFQP + +E G+ E ++N+I D+D R + Y + V+SG
Sbjct: 246 LPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSG 305
Query: 489 GTTMYPGIADRMQKEITAL---------------------APSTI-----KIKI-IAPP- 394
G+TMYPG+ R+++EI L P T K KI I P
Sbjct: 306 GSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPP 365
Query: 393 ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 295
RK+ V++GG++LA + W++++EY+E G
Sbjct: 366 RRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 86.2 bits (204), Expect = 2e-17
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Frame = -2
Query: 651 ITIGXERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 475
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 474 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 343
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 342 TFQQMWISKEEYDESGPGIVHRKCF 268
F + +K +YDE GP I F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQ I IG ERFR E LFQPS LG + GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2287 LPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = -2
Query: 591 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 412
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 411 KII---APPERKYSVWIGGSILASL 346
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = -2
Query: 585 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 421
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 420 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 301
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -2
Query: 573 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 469
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 621 PEALFQPSFLGMESCGIHETV 559
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -1
Query: 577 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 398
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 397 PREEVLRMDRWIHPG 353
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -1
Query: 601 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 428
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 427 LDHQ 416
H+
Sbjct: 954 RKHE 957
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFL 592
LPDGQ+I+IG E E LF+P L
Sbjct: 873 LPDGQMISIGYECISSMEPLFRPDLL 898
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 359 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 496
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = -1
Query: 574 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 401
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 400 SPREEVLRMDRWIHP 356
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 507 NTVMSGGTTMYPGIADRMQKEITALAP 427
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = -1
Query: 577 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 410
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 409 DHRSPREEVLRMDRWIH 359
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -1
Query: 622 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 443
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 442 HRPRALDHQ 416
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 6.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -1
Query: 580 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 407
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 406 -HRSPREEVLRMDRWIHPGFPVHLPADVD 323
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -1
Query: 571 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 401
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 510 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 391
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = -1
Query: 577 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 398
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 397 PREEVLRMDRWIH 359
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -1
Query: 550 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 377
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 376 MDRWIHP 356
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -1
Query: 580 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 401
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 400 SPREE 386
R+E
Sbjct: 606 DQRDE 610
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,694,409
Number of Sequences: 59808
Number of extensions: 378845
Number of successful extensions: 1319
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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